Xanthomonas citri pv. citri UI7: J159_00023
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Entry
J159_00023 CDS
T03733
Name
(GenBank) type III secrection effector, AvrBs3 family, transcription activator-like effector
Organism
xcu
Xanthomonas citri pv. citri UI7
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Gene cluster
GFIT
Motif
Pfam:
TAL_effector
Motif
Other DBs
NCBI-ProteinID:
AJY80033
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Position
pXAC33:complement(13079..16459)
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AA seq
1126 aa
AA seq
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MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLPARRTMSRTRLPSPPAP
SPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQSGLRAADAPPPT
MRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKPKVRSTVAQHH
EALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEA
LLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVYAWRNALTGAPLNLTPEQVVAIASN
IGGKQALETVQRLLPVLCQAHGLTPDQVVAIASNGGKQALETVQRLLPVLCQAHGLTPAQ
VVAIASNIGGKQALETVQRLLPVLCQAHGLTPAQVVAIASNGGKQALETVQRLLPVLCQA
HGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQR
LLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGKQ
ALETVQRLLPVLCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAI
ASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGL
TPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGKQALETVQRLLPV
LCQAHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALE
TVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASN
GGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLPHAPALIKRTNR
RIPERTSHRVADHAQVVRVLGFFQCHSHPAQAFDDAMTQFGMSRHGLLQLFRRVGVTELE
ARSGTLPPASQRWDRILQASGMKRAKPSPTSTQTPDQASLHAFADSLERDLDAPSPTHEG
DQRRASSRKRSRSDRAVTGPSAQQSFEVRVPEQRDALHLPLSWRVKRPRTSIGGGLPDPG
TPTAADLAASSTVMREQDEDPFAGAADDFPAFNEEELAWLMELLPQ
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggatcccattcgttcgcgcacaccaagtcctgcccgcgagcttctgcccggaccccaa
cccgatggggttcagccgactgcagatcgtggggtgtctccgcctgccggcggccccctg
gatggcttgcccgctcggcggacgatgtcccggacccggctgccatctccccctgccccc
tcacctgcgttctcggcgggcagcttcagtgacctgttacgtcagttcgatccgtcactt
tttaatacatcgctttttgattcattgcctcccttcggcgctcaccatacagaggctgcc
acaggcgagtgggatgaggtgcaatcgggtctgcgggcagccgacgcccccccacccacc
atgcgcgtggctgtcactgccgcgcggccgccgcgcgccaagccggcgccgcgacgacgt
gctgcgcaaccctccgacgcttcgccggccgcgcaggtggatctacgcacgctcggctac
agccagcagcaacaggagaagatcaaaccgaaggttcgttcgacagtggcgcagcaccac
gaggcactggtcggccatgggtttacacacgcgcacatcgttgcgctcagccaacacccg
gcagcgttagggaccgtcgctgtcaagtatcaggacatgatcgcagcgttgccagaggcg
acacacgaagcgatcgttggcgtcggcaaacagtggtccggcgcacgcgccctggaggcc
ttgctcacggtggcgggagagttgagaggtccaccgttacagttggacacaggccaactt
ctcaagattgcaaaacgtggcggcgtgaccgcagtggaggcagtgtatgcatggcgcaat
gcactgacgggtgcccccctgaacctgaccccggagcaggtggtggccatcgccagcaat
attggtggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcc
catggcctgaccccggaccaggtggtggccatcgccagcaatggcggcaagcaggcgctg
gagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggcacag
gtggtggccatcgccagcaatattggtggcaagcaggcgctggagacggtgcagcggctg
ttgccggtgctgtgccaggcccatggcctgaccccggcacaggtggtggccatcgccagc
aatggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcc
catggcctgaccccggcacaggtggtggccatcgccagcaatattggcggcaagcaggcg
ctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggag
caggtggtggccatcgccagccacgatggcggcaagcaggcgctggagacggtgcagcgg
ctgttgccggtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatcgcc
agccacgatggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgc
caggcccatggcctgaccccggagcaggtggtggccatcgccagcaatggcggcaagcag
gcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccg
gcacaggtggtggccatcgccagcaatattggcggcaagcaggcgctggagacggtgcag
cggctgttgccggtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatc
gccagccacgatggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctg
tgccaggcccatggcctgaccccggagcaggtggtggccatcgccagcaatattggtggc
aagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctg
accccggagcaggtcgtggccatcgccagccacgatggcggcaagcaggcgctggagacg
gtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggagcaggtcgtg
gccatcgccagcaatggcggcaagcaggcgctggagacggtgcagcggctgttgccggtg
ctgtgccaggcccatggcctgaccccggcacaggtggtggccatcgccagcaatattggc
ggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggc
ctgaccccggagcaggtcgtggccatcgccagccacgatggcggcaagcaggcgctggag
acggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggagcaggtc
gtggccatcgccagccacgatggcggcaagcaggcgctggagacggtgcagcggctgttg
ccggtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatcgccagcaat
ggcggcggcaggccggcgctggagagcattgttgcccagttatctcgccctgatccggcg
ttggccgcgttgaccaacgaccacctcgtcgccttggcctgcctcggcggacgtcctgcg
ctggatgcagtgaaaaagggattgccgcacgcgccggccttgatcaaaagaaccaatcgc
cgtattcccgaacgcacatcccatcgcgttgccgaccacgcgcaagtggttcgcgtgctg
ggttttttccagtgccactcccacccagcgcaagcatttgatgacgccatgacgcagttc
gggatgagcaggcacgggttgttacagctctttcgcagagtgggcgtcaccgaactcgaa
gcccgcagtggaacgctccccccagcctcgcagcgttgggaccgtatcctccaggcatca
gggatgaaaagggccaaaccgtcccctacttcaactcaaacgccggaccaggcgtctttg
catgcattcgccgattcgctggagcgtgaccttgatgcgcccagcccaacgcacgaggga
gatcagaggcgggcaagcagccgtaaacggtcccgatcggatcgtgctgtcaccggtccc
tccgcacagcaatcgttcgaggtgcgcgttcccgaacagcgcgatgcgctgcatttgccc
ctcagttggagggtaaaacgcccgcgtaccagtatcgggggcggcctcccggatcctggt
acgcccacggctgccgacctggcagcgtccagcaccgtgatgcgggaacaagatgaggac
cccttcgcaggggcagcggatgatttcccggcattcaacgaagaggagctcgcatggttg
atggagctattgcctcagtga
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