Xanthomonas citri pv. citri UI7: J159_00106
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Entry
J159_00106 CDS
T03733
Name
(GenBank) type III secrection effector, AvrBs3 family, transcription activator-like effector
Organism
xcu
Xanthomonas citri pv. citri UI7
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Gene cluster
GFIT
Motif
Pfam:
TAL_effector
Motif
Other DBs
NCBI-ProteinID:
AJY80115
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Position
pXAC64:55221..58712
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AA seq
1163 aa
AA seq
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MDPIRSRTPSPARELLPGPQPDGVQPTADRGVSPPAGGPLDGLPARRTMSRTRLPSPPAP
SPAFSAGSFSDLLRQFDPSLFNTSLFDSLPPFGAHHTEAATGEWDEVQSGLRAADAPPPT
MRVAVTAARPPRAKPAPRRRAAQPSDASPAAQVDLRTLGYSQQQQEKIKPKVRSTVAQHH
EALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEA
LLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASN
IGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGKQALETVQRLLPVLCQAHGLTPEQ
VVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQ
AHGLTPAQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQ
RLLPVLCQAHGLTPDQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGG
KQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVV
AIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAH
GLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTLDQVVAIASNGGGKQALETVQRL
LPVLCQAHGLTPEQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPDQVVAIASHDGGKQ
ALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAI
ACNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALESIVAQLSRPDPALAA
LTNDHLVALACLGGRPALDAVKKGLPHAPALIKRTNRRIPERTSHRVADHAQVVRVLGFF
QCHSHPAQAFDDAMTQFGMSRHGLLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMK
RAKPSPTSTQTPDQASLHAFADSLERDLDAPSPTHEGDQRRASSRKRSRSDRAVTGPSAQ
QSFEVRVPEQRDALHLPLSWRVKRPRTSIGGGLPDPGTPTAADLAASSTVMREQDEDPFA
GAADDFPAFNEEELAWLMELLPQ
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggatcccattcgttcgcgcacaccaagtcctgcccgcgagcttctgcccggaccccaa
cccgatggggttcagccgactgcagatcgtggggtgtctccgcctgccggcggccccctg
gatggcttgcccgctcggcggacgatgtcccggacccggctgccatctccccctgccccc
tcacctgcgttctcggcgggcagcttcagtgacctgttacgtcagttcgatccgtcactt
tttaatacatcgctttttgattcattgcctcccttcggcgctcaccatacagaggctgcc
acaggcgagtgggatgaggtgcaatcgggtctgcgggcagccgacgcccccccacccacc
atgcgcgtggctgtcactgccgcgcggccgccgcgcgccaagccggcgccgcgacgacgt
gctgcgcaaccctccgacgcttcgccggccgcgcaggtggatctacgcacgctcggctac
agccagcagcaacaggagaagatcaaaccgaaggttcgttcgacagtggcgcagcaccac
gaggcactggtcggccatgggtttacacacgcgcacatcgttgcgctcagccaacacccg
gcagcgttagggaccgtcgctgtcaagtatcaggacatgatcgcagcgttgccagaggcg
acacacgaagcgatcgttggcgtcggcaaacagtggtccggcgcacgcgccctggaggcc
ttgctcacggtggcgggagagttgagaggtccaccgttacagttggacacaggccaactt
ctcaagattgcaaaacgtggcggcgtgaccgcagtggaggcagtgcatgcatggcgcaat
gcactgacgggtgcccccctgaacctgaccccggagcaggtggtggccatcgccagcaat
attggtggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcc
catggcctgaccccggagcaggtggtggccatcgccagcaatggcggcaagcaggcgctg
gagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggagcag
gtggtggccatcgccagcaatattggtggcaagcaggcgctggagacggtgcagcggctg
ttgccggtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatcgccagc
aatattggtggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccag
gcccatggcctgaccccggcacaggtggtggccatcgccagcaatattggcggcaagcag
gcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccg
gagcaggtggtggccatcgccagccacgatggcggcaagcaggcgctggagacggtgcag
cggctgttgccggtgctgtgccaggcccatggcctgaccccggaccaggtggtggccatc
gccagccacgatggcggcaagcaggcgctggagacggtgcagcggctgttgccggtgctg
tgccaggcccatggcctgaccccggagcaggtggtggccatcgccagcaatggcggtggc
aagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctg
accccggagcaggtggtggccatcgccagccacgatggcggcaagcaggcgctggagacg
gtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccggagcaggtggtg
gccatcgccagcaatggcggtggcaagcaggcgctggagacggtgcagcggctgttgccg
gtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatcgccagcaatggc
ggtggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccat
ggcctgaccccggagcaggtggtggccatcgccagcaatggcggtggcaagcaggcgctg
gagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccctggaccag
gtcgtggccatcgccagcaatggcggtggcaagcaggcgctggagacggtgcagcggctg
ttgccggtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatcgccagc
aatagcggtggcaagcaggcgctggagacggtgcagcggctgttgccggtgctgtgccag
gcccatggcctgaccccggaccaggtggtggccatcgccagccacgatggcggcaagcag
gcgctggagacggtgcagcggctgttgccggtgctgtgccaggcccatggcctgaccccg
gagcaggtcgtggccatcgccagccacgatggcggcaagcaggcgctggagacggtgcag
cggctgttgccggtgctgtgccaggcccatggcctgaccccggagcaggtggtggccatc
gcctgcaatggcggtggcaagcaggcgctggagacggtgcagcggctgttgccggtgctg
tgccaggcccatggcctgaccccggagcaggtggtggccatcgccagcaatggcggcggc
aggccggcgctggagagcattgttgcccagttatctcgccctgatccggcgttggccgcg
ttgaccaacgaccacctcgtcgccttggcctgcctcggcggacgtcctgcgctggatgca
gtgaaaaagggattgccgcacgcgccggccttgatcaaaagaaccaatcgccgtattccc
gaacgcacatcccatcgcgttgccgaccacgcgcaagtggttcgcgtgctgggttttttc
cagtgccactcccacccagcgcaagcatttgatgacgccatgacgcagttcgggatgagc
aggcacgggttgttacagctctttcgcagagtgggcgtcaccgaactcgaagcccgcagt
ggaacgctccccccagcctcgcagcgttgggaccgtatcctccaggcatcagggatgaaa
agggccaaaccgtcccctacttcaactcaaacgccggaccaggcgtctttgcatgcattc
gccgattcgctggagcgtgaccttgatgcgcccagcccaacgcacgagggagatcagagg
cgggcaagcagccgtaaacggtcccgatcggatcgtgctgtcaccggtccctccgcacag
caatcgttcgaggtgcgcgttcccgaacagcgcgatgcgctgcatttgcccctcagttgg
agggtaaaacgcccgcgtaccagtatcgggggcggcctcccggatcctggtacgcccacg
gctgccgacctggcagcgtccagcaccgtgatgcgggaacaagatgaggaccccttcgca
ggggcagcggatgatttcccggcattcaacgaagaggagctcgcatggttgatggagcta
ttgcctcagtga
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