Xanthomonas campestris pv. vesicatoria: XCV2178
Help
Entry
XCV2178 CDS
T00288
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
xcv
Xanthomonas campestris pv. vesicatoria
Brite
KEGG Orthology (KO) [BR:
xcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xcv03000
]
XCV2178
Transcription factors [BR:
xcv03000
]
Prokaryotic type
Helix-turn-helix
LysR family
XCV2178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_24
MarR
HTH_8
HTH_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAJ23855
UniProt:
Q3BTK4
LinkDB
All DBs
Position
2505690..2506580
Genome browser
AA seq
296 aa
AA seq
DB search
MAALNYNHLRYFWAVAHDGNLTRTAERLNLTQSALSVQIRKLEERLGHALFERRGRQLHL
TEAGQIVLDHADAIFATGDELLGTLRQTGAARQALRVGSLATLSRNFQMEFLRPLLGRTD
IDLILRSGSAGELLRALEALNLDVVLLNRAPAGDALSPFVTHRLAEYPVSLVGTPDRLGH
AASFADRLRSHPIILPTVDSSVRIGFDALADRLGVRPQIVAEVEDMAMMRLLAREDIGLA
VLPPIVVKDEIAAGALMEGDQLPDIVETFHAVTMSRRFPNPLLRLLLQPSTRPDSP
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttgaactacaaccatctgcgctacttctgggcggtcgcgcacgacggcaac
ctcacccgtactgccgagcgtctcaacctcacccagtcggcgctttcggtgcaaatccgc
aagctggaggagcgcctgggccatgcgctgttcgaacgccgcgggcgacaactgcatctg
accgaggccggacagatcgtgctcgaccatgccgatgcgatttttgccaccggcgatgaa
ctgctcggcacgctgcggcagacaggtgcggcgcggcaggcgctgcgggtcggctcgctt
gccacgctgtcgcgcaacttccagatggaattcctgcggccgctgctgggccgcaccgac
atcgacctcattttgcgttcgggcagcgcgggtgaactgctgcgcgcactggaggcgctc
aatctcgacgtggtgctgctgaatcgggcacctgccggcgacgcgctgtcccccttcgtc
actcaccggctcgcggagtacccggtcagcctggtggggacgccggatcgcctgggccat
gcggccagcttcgccgaccgccttcgcagccaccccatcatcctgccgacggtggatagc
agcgtgcgcatcggcttcgacgcattggccgaccggctgggcgtgcggccgcagatcgtg
gcggaagtggaggacatggcgatgatgcgactgcttgcccgcgaggacatcggcctggcg
gttcttccgccgatcgtggtcaaggacgagatcgccgctggcgcgttgatggaaggcgat
caattgccggacatcgtggagaccttccatgcggtgaccatgtcgcgacgtttcccgaat
cctctgctccggcttctgctgcagccctcgaccaggccagacagcccgtaa
DBGET
integrated database retrieval system
