Xanthomonas cucurbitae: EBN15_00365
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Entry
EBN15_00365 CDS
T06553
Name
(GenBank) autotransporter domain-containing protein
Organism
xcz
Xanthomonas cucurbitae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Calx-beta
SprB
Big_9
Cadherin_5
NtrZ
Motif
Other DBs
NCBI-ProteinID:
QHG85677
UniProt:
A0A6P1L0F5
LinkDB
All DBs
Position
73133..78490
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AA seq
1785 aa
AA seq
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MRAGVPVRRVVAWVVFALAMLLPGLAWSQGASAYCPTQNRTINQGQSATFDVTNCDGPTD
IGMGDDPRNPLAPFGNGGGNGSTPNGTIVLSELAGPPNNTQTVTYTHGNNSATSDTFYLR
DEDENVLTFNITIVPSRSASIAVTPASSLENSGGSFVYTVTLSQTNSMATTVNLTRSGSA
DSANDYSGALSTVVIPANATSASFTITPTPDATVEADETVVYTVGTGTGYVPGSPGSATA
IIVNDDFPVASIAVSPASVAENGGNNLLYTVTLSQAPTSPVSIGFATGGSATSGTDYTAV
NSSLVIAAGQTTGTITIVPSPDTTAEPDETVTITLDNGSGYLVGAPASATGTIANDDQPA
LSINDVSLSEGNAGTTNATFTVSLSQPAGAGGVTFDIATANGTATAGVDYVASSATAQTI
PNGSSSATFTVLVNGDTLNEPNETFLVNVSNVAGASVTDAQGVGTIVNDDALPALSIDDV
SVNEGNSGTVTATFTVSLSAASAQAVTVNYATANGSATAGSDYTAGSGTLNFAPGVTTQT
VVITVNGDLTVESNETFSVNLSGATNAAVARATGTGTILNDDVVVTIAPTSLPAATAGTA
YSQNLSAAGGTAPYSFAITGGALPAGLTLSATGVLAGTPTASGSFGFTVTATDSGVPSSG
NRVYTLTVGAPAMTLPATTLPNGTAGQAYSAPITPASGGIAPYTYALSTGALPPGISINS
ATGALSGVPTAPGSASFTLTATDSTGGTPAQASQNYALNIVSPSIVVAPSSLPAATRGTA
YSQGLSASGGAAPYTYAISSGVLPAGLSLASNGTLSGTATVEGSFSFTVQATDANTFTGT
QAYTLTVAGPNLVLPASTLPAGTAGQAYTAAITPATGGTAPYSYALSAGTLPAGIVVDAA
TGGLSGTPTVAGSFTFTLTVSDSTPSPAAQASRSYSLTVAAPQVVVAPSSLPGATRGTAY
SQGLSASGGAAPYTYAISSGVLPAGLSLASNGTLSGTATVEGSFSFTVQATDANTFTGTQ
AYTLTVAGPNLVLPASTLPAGTAGQAYTAAITPATGGTVPYSYALSAGALPAGIVVDAAT
GGLSGTPTIAGSFTFTLTVSDSTPSPAAQASRSYVLTIGAATLVIAQGTLPPAVSGTAYT
QTLASSGGVAPYGFAVSSGTLPAGLTLASNGTLSGTPSAAGTSNFTITVTDRSAASASQA
YTFTVGGAAPVAVADTAVTMDGTVVTVAVTGNDTGTISAVAITTAPANGTAVVDGLQVIY
TPNAGFIGTDVLRYTATGSGGTSAATTLTITVNARPVAVSITAEAVPGEAQQVDLTRNAT
GGPFVTAAVVAVLPASAGTASITRVGGAAIASAAGASGPSTAATAMAEPPSFVLTFTPNP
AFVGQATVQFTLSNAFATSIPANVVFNIAPRRDPSQDSEVRGLVDAQSESTRRFARAQID
NFQRRLEATHRGGGGVSNAVSFQPTSHCREADRGTGAQHCHPDTQDADNDFRDAPAVATG
SSTGAQGQGDLGLWVGGAIRSGSLNRQANSNGVDFQTDGLSVGADYRLAQSLAIGAGLGW
GRDDSDVGTRGSRSKGTAYTMALYASFHPGKAFFFDTLVGYQLLSYDLRRFVTDDSSLAE
GNRDGKQWIASLSTGADLQRGELQVTPYARVDVARATLDGYVEDGVAPFALRYADMDVAT
STGNLGLRLEWRREVAWGRLTPQLRVEYQRDFQGRGDATLSYADLSGGPFYRTGQAAFDR
NRLMVGIGAALLTEQGLSTRLEYRGITDGDSNTDQTWMLNLEKKY
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atgagggctggcgtgccggtgcgccgggtcgtggcgtgggtggtgtttgctctggcgatg
ctgttgcctggcttggcctggtcgcaaggcgcgtccgcgtactgcccaacgcagaaccgg
accatcaatcagggccagtcggccacgttcgacgtgaccaattgcgatggtcccaccgac
atcggaatgggcgatgaccccagaaacccgctggcccctttcggcaacggcggaggtaat
ggcagcactcccaacggaaccattgtcctcagtgagctggccggacctcccaacaacacg
cagaccgtcacctatacgcacggaaacaatagcgccacgtccgacacgttctacctgcgc
gacgaggacgagaatgtcctcaccttcaacatcaccatcgtgccgtcgcgatccgccagc
attgcggtgacgccggccagcagtttggaaaacagcggcggctcgttcgtctacacggtc
acgctgagccagaccaacagcatggccacgacggtgaacctgacccgcagcggtagcgcg
gacagcgccaacgactattccggcgcgctaagcaccgtcgtgattccggccaacgccacg
tcggccagctttaccatcaccccgacccccgacgcgacggtggaagccgatgagacggtc
gtctataccgttggtaccggtaccgggtacgtccccggcagcccgggcagcgccactgcc
atcatcgtcaacgatgactttcccgtcgcgagcattgcggtgtccccggccagcgtggcc
gaaaatggcgggaacaacctgctctataccgtcaccctgagccaggccccgacctcgccc
gtctcgattggtttcgccactggcggttcggcgacgtccggcactgactatacagctgtc
aattcgtcgctggtcattgcggccggccagaccaccggcaccatcaccatcgtgcccagc
cccgacaccaccgccgagcccgacgagaccgtgaccatcaccctggacaatggcagcggt
tacctcgtgggtgcgccagccagcgccaccggcaccatcgccaatgacgaccagccggcg
ctgtcgatcaacgacgtctccctgagcgaaggcaatgccggcaccaccaatgccaccttc
acggtatcgctcagccaaccggccggcgccggcggcgtcaccttcgacatcgccaccgcc
aatggcaccgccaccgctggcgtggactacgtggcgtccagcgccaccgcgcaaaccatt
cccaacggcagcagcagcgccaccttcaccgtgctggtgaacggtgacaccctcaacgag
ccgaacgaaaccttcttggtcaacgtcagcaacgtcgccggcgccagcgtgaccgatgca
cagggagtgggcaccatcgtcaacgacgatgcactaccggcgttgtcgatcgatgacgtc
agcgtcaacgaaggcaatagcgggaccgtcacggccacgttcacggtgagcctgagcgct
gccagcgcgcaggcggtcaccgtcaactacgccaccgccaatggcagtgccaccgccggc
agcgactacaccgccggctcggggacgctgaattttgcgcccggcgtcaccacgcagacc
gtggtcatcaccgtcaatggcgacctcacggtcgagtccaacgaaacattcagcgtcaat
ctgtccggtgccaccaatgccgccgtcgcgcgcgcgaccggcacgggcaccatcctcaac
gacgatgtggtggtcaccatcgcgccgacgtcgttgccggcggctactgccggcacggcg
tacagccagaacctgagtgccgcaggcggcaccgcaccttacagtttcgccatcaccggc
ggcgcgttgccggccgggctcaccctgagcgccaccggcgtgctggccggcacgcccacc
gccagcggcagctttggcttcactgtgacggctaccgacagtggtgtcccgagctccggc
aaccgcgtctatacgctgaccgtgggcgcgccggccatgaccctgccggcgaccaccttg
cccaacggcactgccggccaggcctacagcgcgccgatcaccccggctagtggcggcatc
gcaccgtacacctacgcgctcagcaccggcgcgttgccgccgggaatctcgatcaatagc
gcgaccggcgcgctcagtggcgtgccgacggcgccaggcagcgccagcttcaccctgact
gcgaccgacagcaccggcggtacgcccgcacaggccagccagaactatgcactcaacatc
gtttcgcccagcatcgtggtggcaccgagcagcttgcccgctgccacgcgcggcacggcc
tacagccagggcttgagcgccagtggcggcgctgcgccatacacctatgcgatcagcagc
ggggtgttgccggcgggcctgagcttggccagcaatggcacgttgtcgggcacggccacg
gtggagggcagcttcagcttcactgtccaggccaccgatgcgaataccttcaccggaacg
caggcctacacgttgacggtagctggcccgaatctggtgctgccagcttccaccctgccg
gctggcacagccggtcaggcgtatacggcggccatcaccccggccaccggcggcaccgcg
ccctacagctatgcgctgagcgcgggcacactgccggccggcatcgtggtggatgcggcc
acgggtggattgagcggtacgccgacggtggcgggcagcttcaccttcacgctcaccgtt
tccgacagcacgcccagcccggctgcgcaggcatcgcgcagctattcgctgaccgtcgct
gctccgcaggtggtggtggcaccgagcagcttgcccggcgccacgcgcggcacggcctac
agccagggcttgagcgccagtggcggcgctgcgccgtacacctatgcgatcagcagcggg
gtgttgccggcgggcctgagcttggccagcaatggcacgttgtcgggcacggccacggtg
gagggcagcttcagcttcactgtccaggccaccgatgcgaataccttcaccggaacgcag
gcctacacgttgacggtagctggcccgaatctggtgctgccagcttccaccctgccggct
ggcacggccggtcaggcgtacacggcggccatcaccccggccaccggcggcaccgtgccg
tacagctatgcgctgagtgcgggcgcactgccggccggcatcgtggtggatgcggccacg
ggtggattgagcggtacgccgacgatagcgggcagcttcaccttcacgctgaccgtttcc
gacagcacgcccagcccggctgcgcaggcatcgcgcagctatgtgctgaccatcggcgct
gccacgctggtgattgcgcagggcacgttgccgccggccgtgagcggtaccgcatacaca
cagacgctggcctccagtggaggggtggcgccttacggtttcgcggtgagcagcggtacc
ctaccggcgggcctgaccctggccagcaacggcacgctgtcgggcacgcccagcgctgcg
ggcaccagcaacttcaccattaccgtgaccgaccgcagtgccgccagcgcctcgcaggcc
tataccttcaccgttggcggtgccgcgccggtagcggtggcagacaccgccgtaaccatg
gatggcacggtcgtgaccgtggcggtgaccggtaacgacaccgggacgatcagcgccgtc
gccattaccaccgcgcctgccaatggcacggcggtcgtcgatgggctgcaggtgatctat
acgccgaacgctggcttcatcggcaccgacgtgctgcgctataccgccaccggtagtggc
ggcacctcggccgcaaccacgctgaccatcaccgtcaacgcgcggccggtggcggtatcg
atcaccgcagaagcggtacctggcgaagcgcagcaggtggacctcacccgtaatgccacc
ggcgggccattcgtgaccgccgcagtggtggcggtgctgccggcctcggcaggcacggcc
agcatcacccgtgttggcggtgcagccattgcctcggcggcgggtgcctccggcccatcg
acggcggccactgccatggccgagccgcccagcttcgtactgacctttacacccaacccg
gccttcgttggccaggccacggtgcagttcaccctgtccaatgcgttcgccacctccatc
ccggccaacgttgtcttcaacatcgcgccgcgccgcgatccgagccaggattcagaagta
cgtggcctggtagatgcgcagtccgagtccacgcggcggtttgcgcgggcgcagatcgac
aacttccagcgccgtctggaagcgacccatcgcggtggtggcggcgtcagcaacgcggtg
agcttccagcccacctcgcattgccgtgaggccgaccgcggcaccggtgcgcagcactgc
cacccggacacgcaggacgccgacaacgacttccgcgatgcgcctgcggtggcaacaggc
agcagcaccggtgcgcagggccagggcgatctgggcctctgggtcggcggtgcgatccgt
tcgggcagcttgaaccggcaggccaacagcaatggcgtggatttccagaccgacggcttg
agcgtgggtgccgactaccggctggcgcagtcgctggcgatcggtgctggcctgggttgg
ggccgcgacgacagcgatgttggcacacgcggcagccgcagcaagggcaccgcgtacacc
atggccctgtatgccagcttccatccgggcaaggcgttcttcttcgacaccctggtgggc
taccagctgctgtcctacgacttgcgccgtttcgtgaccgacgacagctcgctggccgaa
ggcaaccgcgacggcaagcagtggatcgcctcactgtccacgggtgcggacctgcaacga
ggcgagctgcaggtgaccccgtatgcgcgcgtggatgtggcacgcgccacgctggatggc
tatgtcgaagacggtgtggcgccgttcgcgctgcgctatgccgacatggacgtggccacc
agtaccggtaacctgggcctgcgcctggaatggcgccgcgaagtggcctggggccggctg
actccgcagttgcgcgtggagtatcagcgcgacttccagggtcgcggcgatgccacgttg
agctatgccgatctcagcggcggtccgttctaccgcaccgggcaggccgcgttcgaccgc
aatcgcctgatggtgggtatcggcgcggcgttgctgaccgagcagggcctgtccacgcgg
ctggaataccgcggcatcaccgatggcgacagcaataccgatcagacctggatgctcaac
ctggaaaagaaatactga
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