Xanthomonas dyei: NYR95_04680
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Entry
NYR95_04680 CDS
T09460
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00470
D-Amino acid metabolism
xdy00550
Peptidoglycan biosynthesis
xdy01100
Metabolic pathways
xdy01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NYR95_04680
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NYR95_04680
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NYR95_04680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xdy01011
]
NYR95_04680
Enzymes [BR:
xdy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
NYR95_04680
Peptidoglycan biosynthesis and degradation proteins [BR:
xdy01011
]
Precursor biosynthesis
Amino acid ligase
NYR95_04680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
WOB54885
LinkDB
All DBs
Position
1103844..1104899
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AA seq
351 aa
AA seq
DB search
MSASSIGTRDPGTGTGEEQIVQPASSAVTGPGSRVPGPAPSRTSDPAAFGRVAVLLGGTS
SEREVSLNSGSNVLDALRARGVDAQPVDGIPALAQALVAQRFDRVFNVLHGHNGGGEDGI
VQGLMEAFGIPYTGSNVLGSALSMDKIRTKQVWLSLDLPTPRYARLAAGASGDQIHAVAK
QIGLPVIVKPANEGSSVGISRVFDQAQLEEAVLLAARYDGALLMEQLIEGDELTVAILGE
TALPSIRIVPKGQWYDYNAKYVADDTQYLCPGLEGDAEAQIGQLALDAFRAAGARGWGRV
DVMRDRSSGQLYLLEVNTAPGMTSHSLVPKAARQLGIDFEELVWRVLEQTL
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtcctctatcgggacccgggacccgggaaccgggaccggtgaagagcagatc
gtgcagcccgcgtcttctgctgttacgggtcccgggtcccgggtccccggtcccgcaccg
tcgcgaaccagcgaccccgccgcgttcgggcgcgtcgccgtgctgcttggcggcacctcg
tccgagcgcgaagtgtcgttgaattccggcagcaacgtgctggacgcgctgcgcgcgcgc
ggtgtcgatgcgcagccggtggacggcattcccgccttggcgcaggcgctggtcgcgcag
cgcttcgaccgtgtgttcaacgtgctgcatggccataacggcggcggcgaagacggcatc
gtgcagggcttgatggaagccttcggcatcccgtacaccggctccaacgtgctcggctcg
gcgttgagcatggacaagatccgcaccaagcaggtgtggttgtcgctggatctgccgacg
ccgcgttacgcgcgtctggctgccggcgccagcggcgatcaaattcatgctgttgcaaag
cagatcggcttgccggtgatcgtcaagccggccaacgaaggctccagcgtcggtatcagc
cgcgtgttcgatcaggcccagctcgaagaagcggtgctgctggctgcgcgctacgacggt
gcgctgttgatggagcaactgatcgaaggcgacgaactcaccgtggccattctgggcgag
accgcgctgccgtcgatccgcatcgtgcccaagggccagtggtacgactacaacgccaag
tacgtggccgacgacacccagtacctgtgcccgggtctggaaggcgatgccgaagcgcag
atcggtcagctggcactggacgcttttcgcgctgccggcgcacgcggctggggccgcgtc
gatgtcatgcgcgatcgcagcagcggccagctgtatctgctcgaagtgaacaccgctccg
ggcatgaccagccactcgctggtccccaaggccgcgcgtcagctcggcatcgacttcgaa
gaactggtctggcgcgtgctggagcagacgctatga
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