Xanthomonas dyei: NYR95_22840
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Entry
NYR95_22840 CDS
T09460
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NYR95_22840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xdy03400
]
NYR95_22840
Enzymes [BR:
xdy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NYR95_22840
DNA repair and recombination proteins [BR:
xdy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NYR95_22840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
SH3_13
Helicase_RecD
AAA_22
RecD_N
DEAD
nSTAND3
UvrD_C
T2SSE
AAA_16
AAA_28
SLFN-g3_helicase
Rad17
ATPase
AAA_7
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
WOB54040
LinkDB
All DBs
Position
complement(5229100..5231481)
Genome browser
AA seq
793 aa
AA seq
DB search
MSHPTLLTALHQSGALRTLDLAFAQSLQRLAPDTDPQVLAAAALASLAVTSGHAGLDPAR
AAMLLDQRDGPSPAFPDPTDWQRTLAASRWVDQPNPEDPAAADCPLVLEHGLLYLRRYRE
YERRLALGLQRVAAQPMPAFDANALAPLFAQLFPNATPTAQPVDPIPLPPGEGARSAGEG
SGLPEPSHHQDGTKPPAPSNSPDRQAQAAALALRRKLLLITGGPGTGKTTTIARLLLLRI
AQAHAAGHAPPRIALAAPTGRAAERMAESLRAIAAGIQLPPTYSAFQAKQPPNPAVSPLP
QAGEGARRAGEGPPLPWESLLPSGASTLHRLLGVIPDSPNFRHNADNPLPFDLIVVDEAS
MVDLPLMCKLVEAVTDGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDALQPQDADALQ
PLLGHAPTGSTPASIQTISHTISHSHSSGLAGHRVHLLRGYRQAENFALAPLADAIRAGD
ADTALALLRSGELAGVHFHEEGDDPLTLGRDALLAHWRALADAQDPAAALRDAGRLRLLT
AVRAGPQGARGLNARIEQLLADTGSGARRLGGASPWFQGRLLLITENSYRHGLFNGDVGI
CLRSDASPSSGQSDANPFSGRDNTSATSERSDASTETTRADAAPSSGPSHPSGTANRADP
AADRRAQGPLVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDDVWLQLPTRD
ARVLSRELLYTGITRARGALHLAGSEAVIRAALARHAARISGLAWRLGAQQQAAPAKPAT
EPSTASPVQGSLF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccaaccctgctgaccgccctccaccagagcggcgccctgcgcacgctggat
ctggccttcgcccaaagcctgcaacgcctggccccagacaccgacccacaggtcctggcg
gccgccgcgctcgcgtcgctggcagtcaccagcggccatgccgggctggacccggcgcgc
gccgccatgctgctggaccaacgcgacggcccatcgcccgcattcccggaccctaccgac
tggcaacgcaccctggccgcctcgcgctgggtcgaccaaccgaaccccgaagatccggcc
gccgccgactgcccgctggtcctcgaacacggcctgctctacctgcgccgctaccgcgag
tacgaacgccggcttgcgctaggcctgcaacgcgtcgctgcccagcccatgccggcgttc
gacgccaacgcgctggcgccgttgttcgcacagctgttcccaaacgcgaccccaaccgct
cagcccgtggacccaatccctctccccccgggagagggtgcccgaagcgcgggtgagggg
tcgggcctgcccgagccatcccaccaccaagacggcacgaagccaccggccccgtccaac
tcccccgaccgccaggcccaagccgccgcgctggccctgcgccgcaaactgctgctgatc
accggcggccccggcaccggcaagaccaccaccatcgcccgcttgttgctgttgcgcatc
gcccaggcccatgccgccggccacgcgccgccacgtatcgcgctggccgcgcccaccggc
cgcgccgccgagcgcatggccgaaagcctgcgcgccatcgccgccggcatccagctgccg
cctacttacagtgccttccaagcgaagcagccaccgaaccccgctgtttcccctctcccg
caagcgggagagggtgcccgaagggcgggtgagggcccgccactgccctgggaatccctc
ctcccatccggcgccagcaccctgcatcgcctgctcggcgtcatcccggattcgccaaac
ttccgccataacgcagacaacccgttgccgttcgacctgatcgtcgtcgacgaagcctcc
atggtcgacctgccgctgatgtgcaagctggtcgaagccgtcaccgatggcactcagctg
atcctgctcggcgacgccgaccaactgccctcggtagaagccggcgatgtgctcgccgcc
attctgcaggccgccggccccggcgacgccctgcaaccgcaggacgccgacgcgctgcaa
ccgctgctcggccacgcgcccactggcagcacgcctgccagcatccagaccattagccac
accatcagccacagccacagcagcggcctggccggccaccgcgtgcacctgctacgcggc
tatcggcaagcggaaaacttcgcgctcgccccactggccgacgccatccgcgccggcgac
gccgacaccgcgctggccctgctgcgcagcggcgagctggccggcgtgcacttccacgaa
gagggcgacgacccgctcaccctcggccgcgacgcactgcttgcccactggcgcgccctg
gccgatgcgcaagaccccgccgccgccctgcgcgatgcagggcgcctgcgcctgctcacc
gccgtgcgcgccggcccgcaaggcgcgcgcggcctcaacgcccgcatcgaacaactgctc
gccgacaccggctccggcgcgcgcagactcggcggcgcctcgccctggttccagggccgc
ctgctgctgatcaccgaaaacagctaccgccacggcctgttcaacggcgacgtcggcatc
tgtttgcgcagcgacgcgagtccctcttcggggcaaagcgacgcgaatcccttctcgggg
cgcgacaacacaagcgccacctcagagcgcagcgatgcgagcaccgagacaacgcgcgcc
gacgcagccccgtcttctggcccaagccaccccagcggcaccgcaaaccgcgccgacccc
gccgccgaccgccgtgcccaaggccccttggtcgcctggttcgaaggcgacggcgacggc
caggtgcgcggcttccaccccgccgccttgcccgcccacgagagcgccttcgccatgacc
gtgcacaaggcccagggcagcgaattcgacgacgtctggctgcaactgcccacccgcgac
gcccgcgtgctcagccgcgaactgctctacaccggcatcacccgcgcccgcggcgccctg
cacctggccggcagcgaagcggtcatccgcgccgcgctcgcccggcacgccgcgcgcatt
tcgggattggcgtggcggttgggtgcgcagcagcaggcggcacccgccaagccagcaaca
gaaccatccaccgcgtcgcccgtgcaggggtcgttgttctga
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