Xylella fastidiosa subsp. fastidiosa GB514: XFLM_03780
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Entry
XFLM_03780 CDS
T01979
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
xff
Xylella fastidiosa subsp. fastidiosa GB514
Pathway
xff00470
D-Amino acid metabolism
xff00550
Peptidoglycan biosynthesis
xff01100
Metabolic pathways
xff01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xff00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XFLM_03780 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XFLM_03780 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
XFLM_03780 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xff01011
]
XFLM_03780 (ddl)
Enzymes [BR:
xff01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
XFLM_03780 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
xff01011
]
Precursor biosynthesis
Amino acid ligase
XFLM_03780 (ddl)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
ATPgrasp_ST
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ADN62730
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All DBs
Position
complement(791017..791979)
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AA seq
320 aa
AA seq
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MGMSIFSLSPRYTDPAVFGRVAVLLGGTSAEREVSLLSGRNVLEVLRMRGVDAQSVDGVP
ALAQALVERRFDRVFNVLHGHNGGGEDGVVQGLMQAFGVPYTGSDVLGSALSMDKVRTKQ
VWLALGLPTPRYASLSVCATAVEVRKAVEMLGFPVIIKPAKEGSSVGVSRVFALEHLEEA
VALAARYEGELLMEQLIEGDELTVSILDEMALPSIRIVPQGQWYDYNAKYLAEDTQYVCP
GLDDVAEAEIAQLALAAFHSVGCRGWGRVDVMRERGSGRFFLLEVNTAPGMTTHSLVPKA
ASQLGMGFDDLVWRILEQTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggtatgagcatattttcactgtctccacggtatacggatccggcggtgtttggtcgt
gttgcagtgttattaggggggacgtctgctgagcgtgaggtgtctttgctttcaggtcgt
aatgtgttggaagtattgcgcatgcgcggtgttgatgctcagtcggtagatggggttccg
gcactcgctcaggcgctggtggaacggcgttttgatcgtgtgttcaatgtgttgcacggt
cataatggcggtggtgaggatggtgtggtgcaggggttgatgcaggcttttggtgtgccg
tatacaggttcggatgtgcttggttcagcgttgagtatggataaggtgcgcactaaacag
gtttggcttgcgctgggtttgccgacgccgcgttatgcgagtttgagtgtgtgtgccact
gctgttgaggtgcgtaaggcggttgagatgctaggttttccggtgattattaagccggct
aaagaagggtctagtgttggtgtcagtcgtgtgtttgcactggagcatttggaggaggcg
gttgctttagcggcgcgttacgagggtgagttgctgatggagcagttgatcgaaggggat
gaattgacggtgtcgattcttgatgaaatggcgttgccctcaattcggatcgttcctcag
gggcagtggtatgactataacgcgaagtatcttgctgaagacacgcagtatgtgtgcccg
ggtttggatgatgttgctgaggctgaaatcgctcaacttgcgttggctgcattccatagt
gttggttgtcgtggttggggtcgtgtggatgtgatgcgcgagcgcggcagtgggcgcttt
ttcttattggaagtcaatactgctcctggaatgacgactcactcgttagtgccaaaggca
gcgagtcagttgggtatgggttttgatgatttggtgtggcggattctggagcagacttta
tga
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