Xylella fastidiosa M12: Xfasm12_0110
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Entry
Xfasm12_0110 CDS
T00677
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Xfasm12_0110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xfm01007
]
Xfasm12_0110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xfm03016
]
Xfasm12_0110
Enzymes [BR:
xfm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Xfasm12_0110
Amino acid related enzymes [BR:
xfm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Xfasm12_0110
Transfer RNA biogenesis [BR:
xfm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Xfasm12_0110
Prokaryotic type
Xfasm12_0110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
Motif
Other DBs
NCBI-ProteinID:
ACA11149
UniProt:
B0U1L1
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All DBs
Position
complement(129997..132972)
Genome browser
AA seq
991 aa
AA seq
DB search
MSQFTSSYDPTSFEARLYAEWEAAGHFKPSGTGQPYTILLPPPNVTGTLHMGHAFQQTLM
DALVRYHRMCGDDTLWQVGTDHAGIATEMVVSRNVMLEGRGETRDSLGRDGFINKVWEWK
QQSGDTIERQMRRLGVSADWSRSTFTMDPQPSAAVTEAFVRWYEEGLIYRGQRLVNWDPV
LKTAISDLEVENVAEEGMLWSIRYPLSDGVTYEHIEHDAAGNEILRETRDSLIVATTRPE
TLLGDTAVMVHPEDRRYTALIGKTVTLPLTGRQVEVISDTCVDPTFGSGVVKVTPAHDFN
DFEVGVRHQLPMIKVLDDAACILSETYAQGWMTPLNNPKGDSRWINIIDIPESEFVIPAH
LAGLDRYEARKQILADLDTQGLLVAAIPHTLQVPRGDRTGQVIEPYLTAQWFVRMDRLAA
RGLELVERGAVRFVPPNWINTYRHWMNNIRDWCISRQLWWGHRIPAWFDEYDGSFYVGRS
EAEVRAKHALGPEVTLTQDSNVLETWFSSQLWPFSTLGWPDPTAMAERGFERYLPSSVLV
TGFDIIFFWVARMIMATDHFTGNVPFHDVYITGLIRDAQGQKMSKSKGNVLDPLDIIDGI
TLDDLVAKRTTGLMQPKLAEKIAKATRKEFPDGIAPHGADALRFTIAALATHGRDIKFDL
GRAEGYKNFCNKLWNATRFVLMNTADDTAHSPAQHQAGQDGQDAPRTPQPRTDAEQWILS
RLAAVTAEAHAQFAAYRFDLLAQALYEFAWNEFCDWFVELAKPALNGNDTQAAASTRHTL
LYVLETLLRLLHPLIPFITEELWRQVAPRLGIQATTLMLRPYPQPQQLETAAFANAAADV
EWLKIMVSALRRIRSTLNVPPSRRISLLLQGGQEVDRHRITHFAIALHFLLKLEHIDWLS
AATAAPPSAIAIVGSLKLLVPLEGLIDVDAERARLDKEIKRVESEIDKSNGKLSNAVFVQ
NAPTAVVEQERSRLTEWTTQLNGLRERRTTL
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagttcacctccagctatgaccccacctcttttgaagcgcgcttatacgccgag
tgggaagctgcaggccacttcaaaccatccggcaccggccagccctataccatcctgcta
ccgccaccgaatgtcaccggcaccctgcatatgggccatgccttccaacaaaccttgatg
gatgcgctggtgcgctatcaccgcatgtgtggagatgacaccctatggcaagtgggcacc
gaccacgccggtatcgccaccgaaatggtagtcagccggaatgtgatgctcgaaggccgc
ggagaaacccgcgactcgctgggccgcgacggctttatcaacaaagtgtgggagtggaaa
cagcaatccggcgacaccatcgaacggcaaatgcgccgcctcggcgtctccgcagactgg
tcacgcagcaccttcaccatggacccgcagccatcagcggcggtgacagaagcgtttgtg
cgctggtacgaagaagggctgatttaccgcggccaacgtctggtcaactgggacccggtg
ctgaaaaccgccatctctgatctggaagtggagaatgtcgcagaggaaggcatgctatgg
tcgatccgctatccactgagcgacggtgtcacctacgaacacattgagcatgatgccgca
gggaatgaaatcctgcgcgagacccgcgactccctcatcgtagccaccacccgtccggaa
accctgctcggcgacaccgcggtgatggtgcatcctgaagaccggcgctacaccgcattg
atcggtaaaaccgtgacattgccgctgaccggacgccaggtcgaagtgatcagcgacacc
tgcgtagatcccacattcggcagcggtgtcgtcaaagtcactccagcgcatgacttcaac
gactttgaagttggtgtgcgacaccaattaccaatgatcaaagtgctcgacgatgccgcc
tgcattctctccgagacatacgcccaaggttggatgacccctctaaacaacccaaaagga
gatagtcgctggatcaatatcattgatattccggagagcgagtttgtcataccagcacat
ctggcgggcctggaccgctacgaagcacgcaagcagatactggccgatttggacacacaa
ggcctgctcgtcgcggcgataccacataccttgcaagtgccgcgtggcgaccgaaccggc
caggtaattgaaccctatctcactgcacagtggtttgtgaggatggataggctcgccgca
cgcggattggaactggtcgagcgcggcgctgtgagatttgttccgccaaactggatcaac
acctaccgccattggatgaataacatccgagactggtgcatcagccgccaactgtggtgg
ggccaccgtatcccggcctggttcgacgagtatgatggatcattctacgttggtcgcagt
gaagcagaggtccgtgccaaacacgccctcggccccgaagtgacgctcacgcaagacagc
aatgtgctggaaacctggttctcctcgcaactgtggcccttctccaccctggggtggccc
gatccaacggccatggccgaacgcggctttgaacgctatctgccttcatcggttttggtc
accggattcgacattattttcttctgggtggcccgcatgatcatggccaccgaccatttc
accggaaacgtgccattccacgatgtgtacatcactggtctgattcgcgatgcccaaggc
cagaaaatgtccaaatccaaaggcaacgtgctcgacccgctggacatcatcgacggcatt
accttggatgacctggtcgccaagcgcaccaccggactgatgcaacccaagcttgccgaa
aaaatcgccaaagccacacgcaaagaatttcctgacggcatcgccccgcacggggccgat
gcgttgcgcttcaccatcgcggcactagcaacccacgggcgcgatattaaattcgacctt
ggccgcgccgaagggtacaaaaacttctgcaacaaactgtggaacgccacccgttttgtg
ctgatgaacaccgccgacgacaccgcccactcacccgcgcaacaccaagcgggccaagac
gggcaggacgcaccccgcaccccgcaaccgcgcaccgacgccgaacaatggattctgtcg
cggctggccgccgtcaccgcagaagcacatgcgcaatttgccgcctaccgcttcgattta
ttggcgcaggccttgtacgaatttgcgtggaacgaattttgtgattggttcgtcgaactg
gccaaacccgcactcaatggcaatgacacccaggccgccgccagcacccgtcacaccctg
ctgtacgtgttagaaaccctgctgcgtctgctgcatccactcatcccgtttatcacggaa
gaactctggcgccaggtggcgccacgcctgggcatccaagcaacaacgctgatgctgcgc
ccctatccacagccacagcagctagagaccgcggccttcgccaacgccgccgccgatgtt
gaatggctaaaaatcatggtcagcgcattgcgccggatacgcagcaccctcaacgtgcca
ccttcgcggcgcatctccctgctgctccaaggaggccaggaggttgaccggcatcgtatc
acgcatttcgccattgcattgcactttttgctcaaactcgaacacatcgactggctgagc
gccgcgaccgccgcccctccgtccgcgatagccatcgttggcagcttaaaactactggtg
ccgctggaaggtttgattgatgtggacgccgaacgcgcgcgcctggataaagaaatcaaa
cgtgtcgaaagcgaaatcgataaaagcaacgggaaattgagtaacgccgtctttgtgcaa
aacgcccctacggcggtggtggagcaagaacgcagccgcctcacggagtggacgacacaa
ctcaacgggctacgcgaacgacgcaccacactatga
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