Xylella fastidiosa M12: Xfasm12_0889
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Entry
Xfasm12_0889 CDS
T00677
Name
(GenBank) Oxoglutarate dehydrogenase (succinyl-transferring)
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xfm
Xylella fastidiosa M12
Pathway
xfm00020
Citrate cycle (TCA cycle)
xfm00785
Lipoic acid metabolism
xfm01100
Metabolic pathways
xfm01110
Biosynthesis of secondary metabolites
xfm01120
Microbial metabolism in diverse environments
xfm01200
Carbon metabolism
xfm01210
2-Oxocarboxylic acid metabolism
Module
xfm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xfm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Xfasm12_0889
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Xfasm12_0889
Enzymes [BR:
xfm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Xfasm12_0889
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ACA11874
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All DBs
Position
complement(960612..963503)
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AA seq
963 aa
AA seq
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MTLGRRLDISVHCRRSQPPSTRLSIVDNLIKQFTQSSPLAGGNAAYIEDLYEQYLVLPNS
VDPKWKAYFDGFKGRDAGDIPHSAVIAHITDTAKQSVKQGPSDERERNIGRLITAYRSRG
HLGARIDPLGLAPPSNPPDLDLPFHNLSQADLDNEFSTGGIGGQPRMKLRNLLAHLKATY
TDTIGTEFMHISEFEQRQWIYRRLESVSGKIASNATNRKRILERLTAAEGLERYLHTKYV
GQKRFSLEGGDALIPLMDTLVRQAGNNDVKDIVVGMAHRGRLNVLVNTLGKNPRKLFDEF
EGKFEHAHHDRAHTGDVKYHMGFSADIAVGDGKQVHLALSFNPSHLEIVDPVVAGSVRSR
QERFGDTERKTVLPILIHGDAAFAGQGVVMELLQMSQARGFAVGGTLHVIINNQIGFTTS
ARDDARSTPYCTDVAKMIGAPVFHVNGDDPDAVVFVAQLAYEFRQQFKKDVVIDLVCYRR
WGHNEADEPAATQPVMYQTIRKHKTTRELYATKLEGEGVIAAGEAKAMVDDYRAKLDSGK
FTTELASKHTDEFVIDWSKYLSGKLEDTVKTSVKRQTLNKLAALINTTPATVELHPRVAK
IYEDRIKMAAGEQPGDWGFAENLAYATLLAEGHKLRLVGQDAGRGTFFHRHAILHDQKTD
SYYLPLRQLVSNPDDATVIDSLLSEEAVMGFEYGYSTTDPNTLCIWEAQFGDFANGAQVV
IDQFIAAGEVKWGRISGLSLFLPHGYEGQGPEHSSARLERFLQLCALENMLVCVPTTPAQ
AFHMIRRQMRMSTRKPLVVMTPKSLLRHKLAVSTLDELANGKFQHIIPDDAADPKHVKRI
VMCAGKVYYDILENQQKRSQNDVAIIRIEQLYPFPRALLASELKRFNKATDVVWCQEEPQ
NQGAWYQIKHHLQAVLAHGQRLHYAGRSSSPSPAVGHMAEHMAEQESLVADALLNPFNDH
VAE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtgactctaggacgtcgcttagacatatccgtgcattgcagacgtagccaacccccatcg
acccgactaagcatcgtggacaatctaatcaagcagtttacccaatcctctcctctggcc
ggcggcaatgccgcctacattgaagatctttacgagcaataccttgtcttgcccaatagc
gtcgatcccaagtggaaagcttacttcgacggttttaagggacgtgatgcaggtgacatc
ccacactcggcggtcatcgctcatatcaccgacacagccaagcaaagtgtcaagcagggc
ccaagcgacgaacgggaacgcaacatcggccgtctcatcaccgcttatcgctcacgtggc
catctcggtgcccgaatcgatccactggggctggctccgccaagtaacccgcctgatcta
gatctgccatttcataatctatcgcaagccgatctcgacaatgaattcagcacgggtggc
atcggtggccagccacggatgaagctgcgcaatctgctcgcacacttaaaagcaacctat
accgataccatcggcacagaattcatgcatatctctgaattcgaacagcgccagtggatc
tatcggcgtctggaaagtgtcagtggcaaaattgctagtaacgcgaccaaccgcaaacgc
atcctcgagcgtctgaccgccgcagagggcctggaacgttatctgcatacgaaatatgta
ggacagaaacgcttctctctggagggaggtgatgcattgattccgttgatggacaccttg
gtgcgtcaagccggcaacaatgatgtcaaggatatcgtagtcggtatggcccaccgcggc
cgactaaacgtgctggtcaacacgttgggcaaaaatccacgcaaattgttcgacgagttc
gagggcaagttcgagcacgcccatcacgaccgcgctcacaccggtgacgtgaaataccat
atgggcttctcagctgacatcgccgtcggcgatggcaagcaagtacatttggcgctctcc
ttcaatccatcgcaccttgaaatcgttgatccagtcgttgcagggtcagtacgttcgcgt
caagagcgcttcggagacacagaacgcaaaaccgtgctaccaatcctgatccatggcgac
gctgcattcgccggccaaggtgtggtcatggaactgctccagatgtcacaggcacgtggc
ttcgcagtgggcggcactctgcatgtgatcattaataatcaaatcggcttcaccaccagt
gcgcgggatgacgctcgctccactccatactgcactgatgtcgccaaaatgattggcgca
ccagtgttccacgttaacggtgacgatccagacgccgtcgttttcgtagcgcaactggcc
tacgaattccgccagcaattcaaaaaagacgtagtcattgatctagtttgctaccgccgc
tggggacacaatgaggcagatgaaccggctgcaacgcaaccagtgatgtaccagaccatc
cggaagcacaaaaccacccgcgagctttacgcaaccaagctagagggcgaaggcgtcatt
gcggcaggcgaagccaaagcaatggtagatgactaccgagccaaactggactcaggcaag
ttcaccactgagcttgcaagcaaacacacggatgaattcgtcatcgactggtccaagtac
ctgtccggaaaactagaggatacggtcaagaccagcgtgaagcgtcagacgctgaacaag
ttggccgcactcatcaataccactccagccactgtggaattgcacccacgtgtcgccaag
atctatgaagaccgcatcaaaatggctgctggcgaacagccgggtgactggggctttgcc
gaaaatctggcctatgccacgttgctggctgaaggccacaagctacgcttggtcggccaa
gacgccggacgcggcacctttttccaccgccacgccatcctgcacgatcaaaaaaccgac
agctattatctgccgctgcgccaactggtcagcaacccggacgatgcgacggtaatcgac
tcgctgctcagcgaggaagccgttatgggctttgagtatggttactcgaccaccgatccc
aacacgctgtgtatctgggaagcgcagttcggcgattttgccaacggtgcccaagtggtc
attgatcaattcatcgctgccggtgaggtcaaatggggtcgaattagcggcctgtcgcta
ttcttaccgcacggttatgagggccaaggtccggaacatagttccgcacgtttagaacgt
ttcctgcaattgtgtgcactggaaaatatgctggtctgcgtgcccaccactccagcgcaa
gcatttcacatgatccgtcgacagatgcgcatgtccacgcggaaaccgctggtcgtcatg
acgcctaaatcactgctacgccacaagctggcagtctctactttggacgaactggctaac
ggtaagttccaacacatcatcccagacgatgcagctgaccctaaacacgtcaagcgcatc
gttatgtgtgccggcaaggtctattacgacatattggaaaaccagcagaaacgaagccaa
aacgacgtagccatcatacgtatcgagcagttgtatccgttcccgcgtgcgttgctggcc
agcgaactaaaacgcttcaacaaggctaccgatgtcgtttggtgccaggaagagccgcaa
aaccaaggtgcgtggtaccaaatcaagcatcacctacaagccgtattggcacatggtcag
aggcttcactatgccggccgctcaagttctccatctccagccgttgggcacatggcagaa
catatggccgagcaagaaagcctcgttgccgatgcactgttgaatccgttcaacgatcat
gtcgctgaataa
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