Xylella fastidiosa M23: XfasM23_1744
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Entry
XfasM23_1744 CDS
T00692
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xfn
Xylella fastidiosa M23
Pathway
xfn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xfn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XfasM23_1744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfn03400
]
XfasM23_1744
Enzymes [BR:
xfn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XfasM23_1744
DNA repair and recombination proteins [BR:
xfn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XfasM23_1744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
UvrD-helicase
Helicase_RecD
UvrD_C
SLFN-g3_helicase
T2SSE
Phageshock_PspD
DEAD
nSTAND3
AAA_16
Herpes_Helicase
ATPase
AAA_28
SH3_13
Rad17
AAA_24
AAA_7
TrwB_AAD_bind
Mg_chelatase
SRP54
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ACB93148
UniProt:
B2I7Y3
LinkDB
All DBs
Position
complement(1927929..1929848)
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AA seq
639 aa
AA seq
DB search
MSLLAALNQAGVLRTLDDALARSLCRLDPKTPDKVAAAAALASMAVAHGHAGVDLAHPGL
LAGEMFDWPSAAEWVHLLRASRWVAEPSEGEAPAPTGQPLVLEQGVLYLRRYREYERRLA
IGLRRIAAARLPPAESAAVATVFAALFPQARAGQDRQALAAALALQRALLLVTGGPGTGK
TTTIARLLLLRVAQARQQGQASLRIALAAPTGRAAERMAESLRAAAGHVSAAGGDAALFA
ALPSGASTVHRLLGVIPDTPRFRHCEDNPLPYDVIVVDEASMMDLPLMCKLVDAVADGTQ
LILLGDPDQLPSVEAGDVLAGILAAAGSGEVLDVADAQVLAPLLGAPSAAVVAECHVVRG
GLHGHRVHLQHSHRQGEDLALAPLAEAVRLGDATAVLGMLRRGTLRGVQFHEGVLDPCVG
AGQVLLAHWRALAALSDPVQALAAAGRLRLLTALREGPQGAAGINARIERLLGGGGVDGY
FHGRLLLMTETSSRQRLFNGDIGVCLRDDDGTMWAWFSGAGGEGVRAFAPAALPAHESAF
AMTVHKAQGSEFDTVWLQLPRQESRVLSRELIYTGLTRARHGLHVAGSESVLCAALARQA
VRVSGLAWRLGVTGCNTVPIGAGAGDAEVFGKGGQGVLF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcgccgcgctcaaccaggctggtgtgttgcgtacgttggatgatgcgttg
gcgcggagtttgtgccgtcttgatccgaagactccggacaaggtggccgctgccgctgcg
ctggcctcaatggcggtggcgcatggtcacgcgggtgtagatctggcccatcctggattg
ctcgctggagagatgttcgactggccttccgctgcggagtgggtgcatctgctgcgcgcc
agtcggtgggtggccgagccatctgagggggaggcaccagcaccgacagggcagccgttg
gtgcttgagcaaggggtgctctatctgcgtcgctatcgtgagtatgagcggcgtttagcg
atcggtttgcgtcggattgccgctgcacggttgccaccggctgaatcggccgcggtggcg
acggtgtttgcggcgttgtttccacaggcacgcgctgggcaggatcgtcaggcattggcg
gctgcgttggcgttgcagcgtgcgttattgctggtcacgggggggcctgggactggcaag
acaacgacgattgcgcgcctgttattgctgcgtgtcgcccaggcgcggcaacaggggcag
gcgtcgttacgtattgcgctggccgcgccgacgggccgtgcggccgagcgaatggctgaa
agtctgcgtgcggcggcagggcatgtgtccgcggcggggggggatgcggcgttgtttgcc
gcgttgccgtcgggagcgagtacggtgcatcgtttgcttggggtgatccccgatacgccg
cgctttcgtcattgtgaggacaatccgttgccttatgacgtgatcgtggtggatgaggct
tcaatgatggatctgccgctgatgtgtaagttggtggatgctgtggcggacgggacgcag
ttgattttgctgggtgatccggatcagttgccgtcagtggaggcgggcgatgtgcttgcg
gggattcttgccgctgccggttccggtgaggtgttggatgtcgccgatgcgcaggtattg
gcgcccttgttaggcgcgccgtctgcagcggttgttgcagagtgtcacgttgtccgcggg
gggttacatgggcatcgggtgcatctgcaacacagtcaccgtcagggtgaggatttagcg
ttggcgccgttggctgaggcggtgcgtttgggggatgcgactgcggtgctggggatgttg
cgtcgcggcacacttcgtggggtgcaatttcatgagggggtcttggatccgtgtgtcggg
gctggtcaggtgttgttggcgcattggcgtgcgttggctgcgttgtctgatccggtgcag
gcattggcagcggcggggcgattacgtttgttgacggcgttgcgtgaggggccgcagggg
gcggcggggatcaatgcgcggattgagcgcctgctcggcggcggcggtgtggatggttac
tttcatgggcggctgttgttgatgactgagactagttctcgtcagcgtttgttcaatggt
gatattggggtgtgtcttcgggatgatgatgggacgatgtgggcttggttttctggtgct
gggggagagggtgtccgcgcatttgcaccggctgcgttgccggcgcatgagagtgcgttt
gcgatgacggtgcataaggcgcaggggtcggagttcgatacggtgtggttgcagttgccg
cgtcaggagagtcgggtgctgtcacgggagttgatctatacggggttgactcgtgcacgc
catgggttgcatgtggcgggcagtgagtcggtgttgtgtgcggcgttggcacggcaagcg
gtgcgtgtgtcggggctggcttggcggcttggtgtcactggttgcaacacggtgccaata
ggggcaggtgcgggggatgcggaggtgtttggcaagggggggcaaggggtgttgttctga
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