Xanthomonas fragariae: BER92_08045
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Entry
BER92_08045 CDS
T04667
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xfr
Xanthomonas fragariae
Pathway
xfr00020
Citrate cycle (TCA cycle)
xfr00785
Lipoic acid metabolism
xfr01100
Metabolic pathways
xfr01110
Biosynthesis of secondary metabolites
xfr01120
Microbial metabolism in diverse environments
xfr01200
Carbon metabolism
xfr01210
2-Oxocarboxylic acid metabolism
Module
xfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BER92_08045
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BER92_08045
Enzymes [BR:
xfr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
BER92_08045
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
E1_dh
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
AOD14691
UniProt:
A0A1Y6H9K1
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Position
complement(1778397..1781225)
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AA seq
942 aa
AA seq
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MDNLLKQFAQSSQLAGGNAAYIEDLYEQYLVAPDSVDPKWKSYFDGFKGRDAGDVPHSAA
IAHILTASRQATNAGTGTGASDERERNVGRLITAYRARGHLGAQLDPLGLTPPVNPPDLD
LPFHSLSQADLDSEFSTGGVGGQPRMKLKDLLARLKATYASTIGAEFMHIQEFDQRQWIY
KRLEDAGGKIASDAASRKRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDALIPMMDEII
RQSGNDQVKDIVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHAHDDRAHTGDVKYHM
GFSADIAVGSDTQVHLALAFNPSHLEIVDPVVVGSVRSRQERFGDAERKTVLPILIHGDA
AFAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTSARDDARSTLYCTDVAKMIGAP
VFHVNGDDPDAVMFVSKLAYEFRQKFKKDVVIDLVCYRRWGHNEADEPAATQPVMYQTIR
KHKTTRELYAAKLESDGVLSADEARALVDGYRNKLDSGEYTTELAKRKPDEFAIDWSRYL
VGTPANPVDTRVKRDQLDRLAKLITTIPEGVELHARVSKIYEDRVKMAAGNQLGDWGFAE
NLAYATLLAEGHKLRLVGQDAGRGTFFHRHAILHDQKTDSYYLPLRQLVQNPEDATVIDS
LLSEEAVVGFEYGYSTTDPNALCIWEAQFGDFANGAQVVIDQFIAAGEAKWGRIAGLSLF
LPHGYEGQGPEHSSARLERFLQLCALENMLVCVPTTPAQCFHMIRRQMRMTTRKPLVVMT
PKSLLRHKLAVSSLEELADGEFQHLIPDAKADAGKVRRVVLCSGKVYYDLLEDQTKRGQD
DVAILRAEQLYPFPRAQLAAELKAYANATDVVWCQEEPQNQGAWYQIRHHLNSCLSSGQS
LHYAGRARSPSPAAGHMADHITEQQKLVADALLNPFNDQVAE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
gtggataatctcctaaagcagttcgcgcagtcatcgcagctcgccggcggcaacgccgcc
tatatcgaggatctgtacgagcagtacctcgtcgccccagacagtgtcgatccgaagtgg
aagagctatttcgatggcttcaaaggtcgcgatgctggtgatgtaccgcattcggcggct
attgcccacatcctcactgcttccaggcaagcaaccaatgcggggaccggcactggcgcc
agtgacgagcgcgagcgcaatgtcggccgtctgatcactgcctatcgcgcacgcggtcat
ctcggcgcgcagctcgacccgctcggtctgactccgccggtcaatccgcccgatctggat
ctaccgttccacagcctgtcgcaggcggatctggacagcgagttcagtaccggcggtgtc
ggtggtcagccgcggatgaagctaaaggatctgctggctcgcctgaaagcgacctacgcc
agcaccatcggcgcagagttcatgcatattcaggaattcgaccagcgccaatggatctac
aagcgcctggaagatgccggcggcaagatcgccagcgacgctgccagccgcaagcgcacg
ctagagcggctcaccgccgccgaaggcctggagcgctacctgcataccaagtacgtcggt
caaaaacgcttctcgctggaaggcggcgatgcgttgatcccgatgatggacgagatcatt
cgccagtccggcaacgatcaggtcaaggacatcgtgatcggcatggcccaccgcggccgc
ctcaacgtgctggtcaataccttgggcaagaacccgcgcaagctgttcgacgagttcgaa
ggcaagttcgagcacgcccacgacgaccgcgcgcacaccggcgacgtcaagtaccacatg
ggcttctcggccgacatcgccgtcggtagcgacacgcaggtgcacctggcgctggcgttc
aacccgtcgcacctggaaatcgtcgacccggtcgtggtcggcagcgtgcgttcacgtcag
gaacgtttcggggatgcagagcgcaagaccgtgctgccgatcctgatccacggcgatgcc
gcattcgctggccagggcgtggtgatggagctgttccagatgtcgcaggcacgtggtttc
gcggttggcggcaccgtgcacatcgtggtgaacaaccagatcggcttcaccaccagcgcc
cgcgacgacgcccgttccacgctgtactgcactgacgttgccaagatgatcggcgcgccg
gttttccacgtgaacggcgacgacccggatgcggtgatgttcgtgtccaagctggcgtac
gaattccgccagaagttcaagaaagatgtggtcatcgacctggtctgctaccgccgttgg
ggccataacgaggccgatgaaccggcagcgacccaaccagtgatgtatcagaccatccgc
aaacacaagaccacccgcgagctctatgccgccaagctggaaagcgacggcgtgctgagt
gctgatgaggctagggcgctggtcgacggctaccgcaacaagctcgattcgggcgaatac
accaccgaattagccaagcgcaagccggacgaattcgccatcgattggtccaggtatctg
gtcggcacccctgccaatccggtagacacgcgcgtcaagcgcgatcagctggaccgtctg
gccaagctgatcaccacaatcccggaaggcgtcgagctgcatgcacgcgtgtccaagatc
tacgaggaccgcgtcaagatggccgccggcaatcagctaggcgactggggctttgccgaa
aacctggcctacgccaccttgcttgccgaaggccacaagctgcgtctggttggtcaggac
gccggtcgtggcacgttcttccaccgtcacgcgatcctgcacgatcagaagaccgacagc
tattacctgccgctgcgccagctggtgcagaacccggaagacgccaccgtgatcgattcg
ctgctcagcgaagaagcggtggtgggctttgaatacggctactccaccaccgacccgaat
gcgctatgcatatgggaagcgcagttcggcgacttcgccaatggtgcgcaggtggtgata
gaccagttcatcgccgctggcgaagccaagtggggccgcatcgcgggcctgtcgctgttc
ctgccgcacggctacgaaggccagggtccggagcacagctccgcgcggctggagcgcttc
ctgcagctgtgcgcgctggaaaacatgctggtgtgcgtgccgaccaccccggcgcagtgc
ttccacatgatccgtcgtcagatgcgcatgacgacccgcaagccgctggtggtgatgacg
ccgaagtcgctgttgcgccacaagctggcggtgtcgagcctggaagaactggccgacggt
gagttccagcatctgattccagatgccaaggccgatgccggaaaggtcaggcgggtggtg
ctgtgctcgggcaaggtctattacgacctgctcgaagaccagaccaagcgtggccaggac
gacgttgccattcttcgtgcggagcagctgtatccgttcccgcgtgcgcagttggccgcc
gaactcaaggcttatgccaatgccaccgacgtggtgtggtgtcaggaagagccgcagaat
cagggcgcgtggtaccagatccgccaccatctgaactcctgcctgtccagcggtcagagc
ctgcactacgccggccgtgcccgttcgccctcgcctgctgccggccatatggccgaccac
atcaccgaacagcagaagctggtcgccgatgcgctactcaatccgttcaacgaccaagtc
gctgaataa
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