Xanthomonas citri pv. fuscans: XFF4834R_chr13230
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Entry
XFF4834R_chr13230 CDS
T03094
Name
(GenBank) probable multidrug efflux system transporter
KO
K18138
multidrug efflux pump
Organism
xfu
Xanthomonas citri pv. fuscans
Pathway
xfu01501
beta-Lactam resistance
xfu01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XFF4834R_chr13230
01503 Cationic antimicrobial peptide (CAMP) resistance
XFF4834R_chr13230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xfu02000
]
XFF4834R_chr13230
01504 Antimicrobial resistance genes [BR:
xfu01504
]
XFF4834R_chr13230
Transporters [BR:
xfu02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
XFF4834R_chr13230
Antimicrobial resistance genes [BR:
xfu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
XFF4834R_chr13230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
CDF60916
LinkDB
All DBs
Position
1509907..1513032
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLSDLSITRPVMAVVMSLLLIVLGVMSFTRLTLRELPAIDPPIVSVDVEYTGASAAVVE
SRITQVLEDALAGIEGISTIEARSRNGSSDISIEFVQSRDVEAAANDVRDAVSRVSDRMP
DQARPPEISKVEADADPILWLNMSSSTMDTLQLSDYAERYVVDRFSSLDGVAQVRIGGRQ
RYAMRIWLDRDQLAARELTVADVEAALQNENVELPAGSIESAQRDFTLRVERSYLKPEDF
AKLPLNKGEGGYVVRLGDVARVELTSAERRAYFQSNGVPNVGLGIVRNSTANALDVAREA
RAQAEEVQKSLPKGTNIFVAFDTTTFIDAAVERVYHTLVEAVVLVLVVIWVFLGSARAAL
IPAVTVPVCLIAAFIALYAFDFSINLLTLLALVLCIGLVVDDAIVVVENIQRRIDLGEPP
LVAAKRGTGQVAFAVIATTAVLVAVFLPVGFLEGNTGRLFRELAVALAAAVAISAFVALT
LTPMMSSKLLRAHGQAKPNRFHHWFDGRMQAVSGAYGRSLERHVHRTWIFALLMLLALGA
SAWLMGRIPSELAPAEDRGNFQIMIDGPEGAGFDYTVGQMHQVEDILRPFVGPDKPIVRA
NPRVPGGFGSSEEMHTGRVSVFLQDWEKRTRPTTEVADEVQQKLNVLSGVRARTQVSGGL
VRSRGQPFQLVLGGPDYAEIAQWRDRILQRMEANPGLVGPDSDYKETRPQMRVNIDRLRA
ADLGVPVTAIGGALEALMGSRRVTTFVDNGEEYDVMLQAGREGRMSPEDLTAIRVRSNRG
ELIPLSNLVTLSEVAEAGTLNRFNRLRAITITAGLAPGYPLGDAIAWAQQAAQEELPDYA
QVDWKGESREYQQSGSAVLLTFGMALLVVYLVLAAQFESFAHPLVIMLTVPLAVLGALVG
LWLTGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDEGRSVHAAIVESASVRLRPIL
MTSIATVVGAIPLVVAGGPGSASRATIGVVVIFGVSLSTLLSLYVVPAFYSLIAPYTKSP
EAVARQLETLEAQTPSVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccgacctgtcgatcacccgcccggtgatggcggtggtgatgagtttgctg
ctgatcgtgctgggggtgatgtcgttcacccgcctcacgttgcgcgaattgccggccatc
gatccgcccatcgtgtcggtggatgtggaatacaccggcgcctcggcggcagtggtggaa
agccgcatcacccaggtgctggaagacgcgctggccggcatcgagggcatctccaccatc
gaggcgcgcagccgcaatggctcctccgatatcagcatcgaattcgtgcagtcgcgcgat
gtggaggcggctgccaacgacgtgcgcgatgcggtcagccgcgtgtccgaccgcatgccc
gaccaggcgcggccaccggagatttccaaggtcgaagccgatgccgaccccatcctgtgg
ctcaacatgagctccagcacgatggacacgctgcagctgtccgactacgccgagcgctat
gtggtcgatcgcttctccagcctggacggcgtggcgcaggtgcggatcggcgggcgccag
cgctatgcgatgcgcatctggctggaccgcgaccagctggccgcacgcgaactcaccgtg
gccgatgtggaagcggcgctgcagaacgaaaacgtggagttgccggccggcagcatcgaa
tcggcgcagcgcgatttcaccttgcgcgtggagcgcagttatctcaagcccgaagatttc
gccaagctgccgttgaacaagggcgagggcggttacgtggtacggctgggcgatgtggcc
agggtggagctgacctcggccgagcggcgcgcctatttccagagcaatggcgtgcccaac
gtggggctgggcatcgtgcgcaactccaccgccaatgcgctggacgtggcgcgcgaagcg
cgcgcgcaagccgaagaagtgcagaagtctctaccgaagggcaccaacatcttcgtcgcc
ttcgataccaccaccttcatcgatgcggcggtggagcgcgtgtatcacacgctggtggaa
gcggtggtgctggtgctggtggtgatctgggtgtttctgggcagcgcgcgcgctgcgctg
attcctgcggtgacggtgccggtgtgtctgattgccgcgttcattgcgctatacgccttc
gatttttcgatcaacctgctcaccctgctggccttggtgttgtgtatcggcttggtggtg
gacgacgccatcgtggtggtggaaaacatccagcgccggatcgatctgggcgaaccgccg
ctggtagccgccaagcgcggcaccgggcaggtggcgttcgcggtgattgcgaccacggcc
gtgctggtggcggtgtttctgccggtcggttttctggaaggcaataccgggcggctgttc
cgcgagttggcggtggcgctggcggcggcagtggcgatttcggccttcgtggcgctgacg
ctgacgccgatgatgtcgtccaagttgttgcgcgcgcatgggcaggccaagcccaatcgc
ttccaccactggttcgatgggcgcatgcaggcggtgtccggtgcgtatgggcgctcgctg
gagcggcatgtgcaccgcacctggatctttgcgctgctgatgctgttggcgctgggcgcc
agcgcatggctgatgggccgcattccctccgaactggcgccggccgaagaccgcggcaat
ttccagatcatgatcgacggaccggaaggtgccggcttcgattacacggtggggcagatg
catcaggtggaagacatcctgcgccccttcgtagggccggacaaacccatcgtgcgcgcc
aacccgcgcgtgcccggtggctttggcagcagcgaggaaatgcacaccggccgggtcagc
gtgttcttgcaggattgggaaaagcgcacccgccccaccaccgaagtggccgatgaggtg
cagcagaaactcaacgtgctcagcggcgtgcgtgcgcgcacgcaggtgagcggcgggctg
gtgcgtagccgcggccagccgtttcagctggtgctgggcgggccggattacgcggagatt
gcgcagtggcgcgatcgcattttgcagcgcatggaagccaaccccggcctggtcggcccg
gactcggattacaaggaaacccgcccgcagatgcgcgtcaatatcgaccgcctgcgcgcg
gccgatctgggcgtgccggtcactgccattggcggcgcgctggaagcgctgatgggctcg
cgccgcgtcaccaccttcgtcgacaacggcgaggaatacgacgtgatgctgcaggccggg
cgcgagggccgcatgtcgccggaagacctcaccgccattcgcgtgcggtccaaccgcggc
gaactgatcccgctctccaacctggtgaccttgagcgaagtggccgaagccggcaccttg
aaccgcttcaatcgcctgcgcgcgatcacgatcaccgccggcctggcaccgggttatccg
cttggcgatgccattgcctgggcgcagcaggccgcgcaggaagagcttcccgactatgcg
caggtggactggaaaggcgaatcgcgcgagtaccagcaatcgggcagtgcggtgttgctg
accttcggcatggcgctgctggtggtgtatctggtgctggccgcgcagttcgagagcttc
gcgcacccgttggtgatcatgctgacggtgccgttggcggtgctgggcgcgctggtgggg
ctgtggctgaccggcggcaccctcaacctgttcagtcagatcggcatcgtgatgctggtg
ggcctggcggccaagaacggcatcctgatcgtggaattcgccaaccagttgcgcgacgaa
gggcgcagtgtgcatgcggcgatcgtggaatcggcatcggtgcgtttgcgcccgatcctg
atgacctcgattgcgacggtagtcggcgcgattccgctggtggtggccggcgggcccggt
tcggccagccgcgccacgattggcgtggtggtgatcttcggcgtctcgctgtccacgttg
ttgtcgctgtacgtggtgccggcgttctacagcctgatcgcgccgtacaccaagtcgccc
gaagcggtggcacgccagctggaaaccctggaagcgcagacgccgtcggtgggtgggcat
gcgtga
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