Xanthomonas citri pv. fuscans: XFF4834R_chr27150
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Entry
XFF4834R_chr27150 CDS
T03094
Symbol
trpI
Name
(GenBank) TrpBA operon transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
xfu
Xanthomonas citri pv. fuscans
Brite
KEGG Orthology (KO) [BR:
xfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xfu03000
]
XFF4834R_chr27150 (trpI)
Transcription factors [BR:
xfu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
XFF4834R_chr27150 (trpI)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_11
HTH_20
HTH_28
HTH_IclR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CDF62198
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Position
3129031..3129957
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AA seq
308 aa
AA seq
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MSGSFPPLAALRAFEAAARLQSVSRAAQELHVTHGAVSRHVRSLEQALGTALFARQGRGL
MLTAAGVRLRDATGEGFGVIGQAWAGLRRPAAEAPLVLGCSGSLLARWVIPRLGLLQQEL
PDVRLHLSASEQPPGPDLDGLDAALLLDTPPWPSEWQVHALGVEWIGPVLNPQLASILQI
EGSDPAVLGDHALLHTRSRPQAWPEWAQAHGLAPEALRFGTEFEHLVYLLEAAAAGLGIA
IAPQPLVAADLAAGRLLAPWGFTATHGRWVLCAAKRNPDPRIERLAGWLGKALAEDQHKF
PAMDATKA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctcatttcccccgctggcggcgctgcgcgcgttcgaagctgccgcgcgcttg
cagagcgtcagccgtgctgcccaggaactgcacgtcacccatggcgccgtcagccggcat
gtgcgttcgctggaacaggcattgggcaccgcgctgtttgcacgccagggccgcggcctg
atgctgaccgcggcaggggttcggcttcgcgatgccaccggcgaaggctttggcgtgatt
ggtcaggcctgggcgggactacgacgcccggccgccgaggcgccgctggtgctgggatgt
tcgggcagcttgctggcgcgctgggtgattccgcgcctgggactgctgcagcaagagctg
ccggacgtgcgcctgcatctgtcggccagcgaacagccccctggaccggacctggacggt
ctggatgccgccctgctgctggacacaccaccctggccgagcgaatggcaggtgcacgcg
ctgggcgtggagtggattgggccggtgctgaatccgcagctcgcatcaatcttgcagatc
gagggaagcgacccggccgtgctcggcgatcacgcgctgctgcacacccgctcgcgcccg
caggcctggccggaatgggcacaggcgcacgggctggctcctgaggcgctgcgcttcggc
accgaattcgagcacctggtgtatctgctggaagccgctgccgctggcctggggatcgcg
attgcgccgcagccgttggtcgccgcggacctggcagccgggcgcctgctggcgccgtgg
ggattcaccgccacgcatggccgctgggtgttgtgcgccgccaagcgcaaccccgatcca
cgcatcgaacggctggcaggttggctaggaaaagcgctggcggaagatcagcacaagttt
ccggccatggatgcaacgaaagcctga
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