Xiphias gladius (swordfish): 120784050
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Entry
120784050 CDS
T07311
Symbol
arhgef5
Name
(RefSeq) trichohyalin isoform X1
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120784050 (arhgef5)
Membrane trafficking [BR:
xgl04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120784050 (arhgef5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
Motif
Other DBs
NCBI-GeneID:
120784050
NCBI-ProteinID:
XP_039973409
LinkDB
All DBs
Position
LG22:complement(18935967..18948697)
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AA seq
1872 aa
AA seq
DB search
MGTKRPSCTLFDTLSNINTSDRKLQPRGKICRDPSPRPTMTAQSERERDSNREEDRRRER
EMEKMRDKARYKEMDPREGYYERAPAPRAREGEREWRERERRQEGERNRNGWPVSNVERY
TDREVERGKKKGDTFPRMTKSSAECGRRMMSTTEIGEEKEEWRQRERPRRTETDDWGKDR
GKAWQRERYRERERDEIRSRAREEGKRGGRPVEDEKLRQRETYQEFDAGFQDRGREVGDS
WDRRERDAARKREKPRPNMGEREAKMTSPQRQRDRVIYSDRKEREEAHRKEGRRDTRSEG
DSDERELRREIVRDREREELIYQHSRSEGDNKGKRARERDQNRQGYREEDRQRYRDRERE
VDRTRRRGVEKDRERYREVDKRAAMEADREGERWKESGRDFKEDRAWSNDRKEDGRYREY
EQRRDRERKEREADPRWDDTAGRNSRSLNKTAPRVPPQSQSSGEWSSDMDSETRYRRGRD
SYEERESGRESITESEIDLEEQRDPERAAESGQREQKRSERHERDRGEISGSMPEPRRMW
LEPQRGKNSKKEFVDRERHTKRKEKRREEGRSMESQEGWGREGRLEKEEPDERCLEKSSY
IRRHAGRNEYRGDIERAYEGISVDGEEVGEVWRETDKGRKEYWSDSNGGRERSWQRDAER
ENMADNTEESDKEEDGGSDYLAYSNKEGGSDSGWKQERDGMLSGEDGFVTVSSSGDEEDD
REDDEDEEFEDCQEFWEGGVAYDGSSPVGFKGYEGDEEKEGEWTMGKEEALDEGEMGREK
QRKYVFCVIGQTLPQSKLGDMSPSQVDQIESVERDKKILGRCHHCSDDVAQRPQDDRHLT
LSRHEEHPVINNQDTEGKSEHDTARKERFAIGETTIVDIRYRASSEIQDTETGEEMRSKV
EHPNAETGQIKRDSKTERLLIEWREKNKELAEREMGELSPVPSNPYAYVCSQDSFEQIQP
IFDGINTGAMSPEEVEAIRIRMSGAWSMSEEPKRHSQAPHLKWAKNVVREILGNSEEQTV
DELDSEKQGHQVVNQSETVIKDNTQQEEVSQGTGEIPVVKLNEHHSQAELEEEEPLEVEG
LRGMGQSQADMHADQFTAMHDDTPTHTHADTLLDTEGEEDHSVDKETEPSGGPQLEKADI
EVKITQEGGDEVTLSKTEKEESKEKEVEMYLSVSNTLYKPHSCPILNYGSDSDLLIPSRE
GKSHEEEDRMGESEQDRQGGEAEQRGTAVEAGKTSVGEEIEVESSEGEVVAEREIEGGTL
ASTCSFRDLGPEARIRRRGIRKTTERRNGELVEVEEVEGVGRDRRTRIFSTTDDEDDRSK
SWGEVELRNVLDTIERKKRNSKFFNAAQLYQQYSEAAQNFEILRQSRSDVLSVCEDNAPS
PAPSPPPARRPLPPLPPVPHPHSLSHTGSITSVKSLPVPEPPKSEGRPSSPRLSISLTQS
ATLWRDLPGVRNSGELEELTEDQGRLQEVRFEVVTSEASYCRSLDIVVEHFVKSKQLGAL
LTTQDRNWLFSRLADVRAISHSFLSKLEERVETDIVHFTVCDIIARHCQRFKMVYVPYLT
NQSYQDATYQRLMNENPGFKRIVEKLERSPVCQRLPLRSFLVLPFQRITRIKLLVQNIVK
RTTPGTAEATQAIKALKLLEKLIQESNDSISQMKNIESLVSLSAKVDFECRTLPLISQSR
RLVREGPVTELMDFSLKDTERNIYLHLFNDYLLLSLQKEGGRFTVIDHSPVSELRVENCR
VKLHSLQKNLFRLHMSHKSLLLRTDTQSDKLRWISALSQPHPEIDFSAAQDFPQMQCIRA
FVAQQPDELSLEKADIVLVHQQSSDHWVEGTRLSDRHHGWVPESHLEIISSSRVRQRNLS
DALKLTTATAAV
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaaaaggcccagctgcaccctctttgacactttatctaacataaacacgtct
gaccgcaagcttcagccacgtggaaaaatctgccgggatcctagtcccaggccaacgatg
actgcccagtcggagcgagagagagacagcaaccgagaggaagaccggaggagggaaaga
gaaatggagaaaatgagagacaaagcaagatacaaagaaatggacccacgggagggatac
tatgaaagagctcctgcacccagggcgagagagggagaaagagagtggagggagagagaa
aggaggcaagaaggcgagagaaacagaaacgggtggccagtgtcaaatgtagagaggtac
actgacagagaggtggaaagggggaagaaaaaaggcgatacatttcccagaatgacaaaa
agcagcgcagaatgtggcagaagaatgatgtccaccactgagattggtgaagaaaaagaa
gaatggaggcagagagagaggccgaggcgaacagagacagatgactgggggaaagacaga
gggaaggcatggcagagagagaggtacagagagagggaaagagatgagatccgaagcagg
gcaagggaagagggaaaaaggggaggaagacctgtagaagatgagaaattgcgacagagg
gagacatatcaggagtttgatgctggttttcaagacaggggaagagaagtgggtgattca
tgggacagaagagaaagagatgcagcaagaaaaagagaaaagccaaggcctaacatggga
gagagggaggccaagatgacttccccgcaaagacaaagagacagagtgatctactcagat
aggaaggagagggaagaggcgcacaggaaagagggaaggagagacaccagaagtgaagga
gacagtgacgagagagagttgaggagggaaatagtgagggacagagagagggaggagttg
atatatcaacacagcagaagtgaaggggacaacaagggcaaaagggcgagggagagagat
caaaataggcagggatacagggaagaggacaggcagagatacagagacagagaacgagaa
gtggatagaaccaggaggaggggagtggaaaaagatagggagaggtacagagaggttgac
aagagagcagcaatggaggcagacagggagggagagagatggaaggaaagtgggagagac
ttcaaggaagacagagcgtggtcaaatgacaggaaagaggatggtaggtacagagagtat
gagcagaggagagacagagaaagaaaggagagagaggctgatcccaggtgggatgataca
gcaggcagaaacagccgatccctgaacaagacggctcctagggtgccaccccaatcccag
agcagtggagagtggagcagcgacatggacagtgagacgagatatagaagaggtagagac
agttatgaagagagggaatcggggagagagagcattactgagagtgaaatagatttagaa
gaacagagagatccagagagagctgctgaaagtggtcaaagggagcagaaaagaagtgaa
agacatgagagagatagaggagaaatatccggcagcatgccagagccgagaaggatgtgg
ttagagccgcagaggggtaagaatagtaaaaaagaatttgtagacagagagagacacaca
aagcggaaagagaagaggagagaagaagggaggagtatggagtcacaggaagggtgggga
agagagggaagactggaaaaggaggaaccagatgagaggtgcttggaaaaaagcagttac
atacgaagacatgcagggagaaatgagtacaggggagacatagagagggcgtacgagggt
atcagtgtagatggagaggaggtgggagaggtctggagagagacagataagggaaggaag
gaatattggtctgacagcaatggtgggagagagagaagctggcagagggatgcagagaga
gagaacatggcagataacacggaggagagtgacaaggaggaagacggtgggagcgattac
ttggcctactccaacaaagaaggaggaagtgactcagggtggaagcaagagagagatggg
atgctgtccggagaggacggctttgtgaccgtgtccagcagcggagacgaggaggatgac
agagaggacgatgaagatgaggagtttgaggactgccaggagttctgggaaggtggagtt
gcatatgacggctcctcacctgttggcttcaaggggtatgagggagatgaggagaaggaa
ggggaatggacaatggggaaggaggaggcccttgatgagggggaaatggggagggaaaag
cagcggaagtacgtgttctgtgtgattgggcaaaccttgccccagtcgaaacttggagat
atgtcaccgtcacaagttgatcagatagaaagtgttgaaagagacaaaaaaattctagga
aggtgtcatcactgtagcgatgacgttgcacagagacctcaggatgataggcatctgaca
ctgagtagacacgaggaacacccagtcatcaacaaccaggacacagaaggcaagagtgag
catgacacagcaaggaaggagaggttcgccataggagaaacaactatagtggatatcaga
tacagagcgtcttcagagattcaagacacagagactggagaggaaatgaggagcaaagtg
gagcacccaaatgctgaaacagggcagattaaaagagactcaaagactgaaagactcctc
atagagtggagagaaaaaaataaagaactggctgaaagagaaatgggggaactttctccg
gtcccgagtaatccctatgcttatgtttgttctcaggacagttttgaacaaattcaaccc
atcttcgatgggataaacactggagcaatgagtccagaagaggtggaggccattcgaatc
cgaatgagtggggcatggagcatgtctgaggagcccaaacggcattcccaagccccccac
ctgaaatgggccaaaaacgtggttcgtgagatcctgggaaactcagaggaacagactgtg
gatgaactggactcagaaaaacaaggacatcaagtagtcaaccagtctgagacagtgatc
aaggacaacacacagcaggaggaggtttcacaagggactggagagattcctgttgttaag
ttgaacgaacatcactctcaggcagagttggaggaggaagagccgttggaggtggaggga
ttgagaggtatggggcagagccaagctgacatgcatgctgaccagttcacagctatgcat
gatgacacacccacacacactcatgctgacacactgttagacacagaaggggaggaggat
cacagtgtggacaaagagactgagccttctggtggccctcagttagaaaaggcagatata
gaggtgaaaattactcaagaaggaggcgatgaggttacattatcaaaaacagaaaaagaa
gaaagcaaagagaaagaagtggaaatgtatttatctgtgagcaacacactgtacaagcct
cacagctgccccattcttaattatggatctgattctgatctcctcatcccctccagagag
ggtaagagccatgaggaggaagacagaatgggtgaaagtgaacaggacaggcagggagga
gaggccgagcagaggggtaccgcagtggaggcaggaaagacgagtgtaggagaagaaatt
gaggtggaaagcagtgaaggagaggtggtggcagaaagggaaatagaaggagggactctg
gcgagcacctgcagtttccgagatttgggtcccgaggctcgaatacgaaggaggggaatc
cgtaaaaccactgaaagaagaaatggagagcttgtagaagtggaagaagtggaaggtgtt
ggaagggatcgcagaaccagaatattctctacaacagatgatgaggatgatcggagcaaa
agctggggagaagtggagctgaggaatgttttggacacgattgaaagaaagaaaaggaat
tcaaagtttttcaatgctgcccagctctaccagcagtacagtgaggccgcacagaacttt
gagatcctgcgtcagtctcgctccgatgtcctgtctgtgtgcgaggacaatgccccctct
ccggctccctcacctcctcctgcccgcagacctttacctcccctacctcctgtcccgcac
ccccactccttgtcccacacagggtccatcaccagtgtcaaaagcttgcctgttcctgag
cctcccaagagcgagggcaggccttcctctccacgtctttccatctcactcacacagtcg
gccacattgtggcgtgacctgccaggggtcaggaacagcggtgagctggaggagctcaca
gaggaccaggggcgactacaggaggtgagatttgaagtagtgacctcagaagcctcctac
tgtcggagtttggacattgttgttgaacattttgtcaagtcaaaacagctgggggcgctg
ttgaccactcaagatagaaactggctgttttcccggctggctgacgttcgtgccatcagc
cacagttttttgtcaaagctggaggagcgggtggaaacagacatcgtgcacttcaccgtg
tgtgatatcatcgctcggcactgtcagcgcttcaaaatggtttatgtgccctacctcacc
aaccagtcctaccaggatgccacctaccagagactcatgaatgagaatccagggttcaag
cggattgtggaaaaattagagaggagtcctgtttgtcagagacttcctcttcgttctttc
cttgtccttcctttccaaaggatcacaagaataaagctgctggtccagaacattgtgaag
aggacaactccaggtactgcggaggcgacgcaggccatcaaagctttgaaacttctggag
aagctgattcaagagagtaatgatagcatctctcagatgaaaaacatcgagtccctggtc
tcgcttagtgctaaggttgactttgagtgcaggactctccctctgatcagtcagtctcgg
aggttggtgcgggaaggaccggtcaccgagctgatggatttctctctaaaagacacagag
aggaacatttacttgcacctgttcaatgactacttactactgtcattacaaaaagaaggt
ggaagatttacagtaattgaccactctcctgtatcagagctacgtgtagagaactgccgt
gtaaagcttcactccttgcagaagaacctgttccggctgcacatgtcacacaaatccctg
ctgctaaggactgacacacagagtgataagcttcgttggatatctgccctatcccagcca
catcctgaaatagatttttctgcagctcaagattttccacagatgcagtgtattcgagct
tttgttgcccagcagcctgatgagctgtccttagaaaaggctgacattgttctagtgcac
caacaaagcagcgaccattgggtagaggggaccagactgtccgatcggcatcatggatgg
gtgcccgagtcccatttggaaatcataagcagctcaagagtccgacaacgcaacctgtca
gatgcactcaaactcacaactgccacagctgcagtttga
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integrated database retrieval system
