Xiphias gladius (swordfish): 120784660
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Entry
120784660 CDS
T07311
Symbol
prdm13
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120784660 (prdm13)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120784660 (prdm13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
SET
zf-BED
GPS2_interact
ADK_lid
Motif
Other DBs
NCBI-GeneID:
120784660
NCBI-ProteinID:
XP_039974567
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Position
LG22:7029727..7036229
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AA seq
628 aa
AA seq
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MQATRASTTVSVFADCSIPAGLRIGPVPGIFKLGKYVSDRKEVGPKKKIRLVRGEFVDES
GCPIPDWVGFIRAARNSQEQNLEAVSDLPGGQIFYRVLKEIPAGEELSVWYSNALAQWYD
IPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRGFVSSEQARGTETF
SRSPKSGDIPNTSTSPRGGHSNSSFSDSGRRAVSSSSFLNKAGLSKKSSSEEQDRALDMS
VTSARNQGQLLSLGATSSVLSSMGFHPGVRSAFKPTGVSKVPGSDASREDANGKLSGLGF
SKLIGSMKPLRNVGETLNGGGNHPPKCAPAIMDAASPMVPCTNAIRGFPLMPHMEETSAF
KHVESRMHSGLSPSRYPQMPPGLHFERFSLPHFDGVKTYGGDCNIPLMPFTVYNGELLYS
SPYYPLKFHFGNLLKYPESMSYFSAPSLSQDLGSITNIDREIAMHTQQLSEIAAEKNRTR
LESMPAGGASNAGSGKPXKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPFGD
PSNLNKHIRLHAEGNTPYRCDFCGKVLVRRRDLERHVKSRHPGQTVKKLDDKPGGLFEDA
EQKSDNDSDVDVCFTDDQSDQESSKNND
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccacccgggcgtccaccaccgtcagtgtgtttgcggactgcagcatcccggcc
gggctccggataggaccggtaccgggcatcttcaaactggggaagtacgtgtcggatcgc
aaggaagttggaccaaagaagaagatccgcctggtccgcggggagttcgtggacgagtcg
ggctgtcccataccagactgggtcggattcatccgcgccgccaggaacagtcaagagcaa
aacctggaggctgtgtcggacttacctggtggacagattttctaccgtgtgctgaaagaa
atccctgcaggagaggagctcagcgtgtggtactccaacgctctggcccagtggtacgac
atccccaccacggccactcccacgcacgacgagaaaggtgaggagcgttacatctgctgg
tactgctggagaatattcaaataccccaacacactcaaggcccacgtccacttccactgc
gctctgagcaacgggcgggggtttgtgagcagcgagcaggccagaggcacagagactttc
agcaggtccccaaagtccggagacatccccaacacctccacctctccgaggggcggccac
agtaactcttccttctcagactcgggcaggcgggcagtgtcctcctcgtcatttctaaac
aaagcggggctgtcgaagaaaagcagctcggaggagcaggacagggccctcgacatgagc
gtcacctcagccagaaaccaaggacagctcctcagcctgggcgccacatcctccgtgctg
agcagcatgggcttccacccaggcgtgcgctctgccttcaagccgaccggcgtctccaaa
gtcccgggctcggatgcttccagggaggacgccaacggcaagctgagcggcctgggattc
agcaaactcattgggagcatgaaaccactccgcaacgtgggcgagactctaaatggagga
gggaaccatcctccaaaatgcgcacctgcgatcatggacgccgcctctccaatggtccca
tgcacaaacgctatccggggtttcccgctgatgcctcacatggaggagacctcggctttt
aagcacgtagagagccggatgcactccggcctgtccccatcccgttacccgcaaatgccc
cctggactccattttgagcggttttctctccctcacttcgatggtgtcaagacttatggg
ggagactgtaacatcccattgatgcccttcacagtctacaacggggagcttctgtacagc
tcaccttactatccgctgaaattccacttcggcaacctcctcaagtacccagagtccatg
tcctactttagtgcgccctcactgagccaagacctgggctccatcaccaacatcgaccgg
gagatcgccatgcacacgcaacagctgtccgaaatcgctgcggagaaaaaccggacgagg
ctggaatcgatgcctgccgggggggccagcaacgccggctccggtaaaccgnaaaaagga
cacctgtgtctgtactgcggcaagctgtactccagaaaatacggcctgaaaatccacatg
aggactcacacaggttacaaaccgctcaagtgcaaggtgtgcttcaggcccttcggagac
cccagcaacctgaacaaacacatccggcttcacgccgagggaaacaccccctacaggtgc
gacttctgcggcaaggtgctggtgcggaggcgggacctggagaggcatgtcaagtccaga
cacccaggacagaccgtcaagaaactggacgacaagccgggcggcctgttcgaggacgca
gagcaaaagagcgacaatgacagtgatgtagacgtgtgcttcaccgacgaccagagcgac
caagagtcgagcaaaaacaatgactga
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