Xiphias gladius (swordfish): 120789419
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Entry
120789419 CDS
T07311
Symbol
col10a1b
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
xgl
Xiphias gladius (swordfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120789419
NCBI-ProteinID:
XP_039982064
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Position
LG4:23832283..23837513
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AA seq
657 aa
AA seq
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MDLRVTSLLLALLALAEATPERYYHVPKVSKNPYPIKSQAIAGEQGPPGPPGEPGPMGPT
GPPGKSGIGYTGPQGPAGPPGPPGYSQAGKPGIPGGPGKPGTPGIPGERGAHGLTGAMGP
RGAPGTPGIPGPAGLSSVGKPGPSGIPGAMGPRGEPGLKGHPGIPGLPGPKGERGIGVPG
VQGPPGAVGPMGPSGMPGKPGVGKPGAPGYPGEPGKSGTPGRDGAPGPMGMTGPKGYTGA
PGTGAPGKPGQNGTPGSPGPMGLKGPQGPAGQPGSPGMPGVGKTGEPGIPGSRGAPGTPG
TTGQKGEPGPTGFTGLPGAPGPMGSAGPQGGRGFQGEAGPAGPKGDTGMMGAPGPRGTKG
DQGAQGFTGKPGVPGAVGAPGNPGHNGPQGPKGVQGHTGAPGLPGANGAPGPKGYTGPPG
APGKSGENGRPGPMGPVGSPGQTGHAGVKGHPGLPGPPGPAGLTAKGSAGPPGPPGIPGA
RGQDGFPGPAGPPGPPGPPGEVIYHHEKSMPIKSHEVVMSHEMMKAPMSAFSAVLTRAYP
AAATPVQFNQVLYNGEHHYDVHTGVFTCQIPGIYYFSYHIHVNGANALVALYKNDEPVVF
TYDEYNKGFLDQMSGSAVLMLHADDRVYVQVPDEESNGIFAADNVHCAFSGFLIAST
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggtaacaagccttctccttgccctcctcgctttggctgaggcaacccct
gagaggtactaccatgtaccaaaagtaagcaagaatccctaccccatcaagagtcaggcc
attgcaggagagcaaggtccaccaggacctccaggtgaaccaggaccaatgggcccaact
ggacctcctggaaagagtggtataggatatactggaccacaaggcccagcaggacctccc
ggaccccctggctactctcaagcaggtaaacctggtatcccaggtggccctggaaaacca
ggtacccccggtatccctggtgagagaggtgcacatggcctaactggagcaatgggtccc
agaggtgcacctggtacacctggaatacctggacctgctggactttcttctgttggaaaa
cctggaccaagtggcattcctggagcaatgggaccaagaggagagcctggcctgaaggga
catcctggtattcctggtcttcctggccccaaaggagagagaggtattggagttcctggg
gttcaaggaccaccaggcgcagttggaccaatgggtccatctggtatgcctggcaaacct
ggagttggtaaacctggtgcccctggctatcctggggaaccaggcaagtctggcacgcca
ggaagagatggtgctcctgggccaatgggtatgacagggccaaagggttacactggggct
ccaggcacaggagcacctggaaaaccaggccagaatggtaccccaggttcgcctggacct
atggggctcaaaggtccacaaggtcctgctggtcagccaggctcccctggcatgccaggt
gttggcaaaacgggtgaacctggaataccaggcagcagaggagcccctggtactccagga
accactggtcagaaaggagagccaggcccaactgggtttactggtctaccaggtgctcct
ggtcctatgggctctgcaggtccacagggtggaagaggattccagggtgaggcaggccca
gcaggacccaaaggcgatactggtatgatgggtgcaccaggcccaaggggaaccaaaggt
gaccagggagctcagggtttcaccggaaaaccaggtgtccctggggcagtaggtgctcca
ggtaatccaggtcataatggtcctcagggtccaaagggtgtacaaggccatactggtgcc
ccaggactcccaggtgcaaatggcgctccaggaccaaaaggatacacaggtcccccagga
gcacctggaaaaagtggtgagaacggaaggccaggacccatgggaccagttgggtcccct
ggtcaaacaggtcacgcaggagttaagggccatccaggtcttccaggcccacctggccca
gctggcttaacagccaagggcagtgctggtcctcctggtccacctggaattccaggtgcg
agaggtcaagatggtttcccaggccctgccggccctcctggtccacctggcccaccagga
gaggtgatctatcaccatgagaagagcatgccaatcaagtcccacgaggttgtgatgtct
catgagatgatgaaggcccccatgtctgccttcagtgctgtgctgaccagggcctacccc
gcagctgcaacacctgttcagttcaaccaggttctgtacaatggggagcaccattatgac
gtccatactggcgtgtttacctgccagatcccaggaatctactatttcagctatcatatt
catgtgaatggtgccaatgcattggtggccctctacaaaaacgatgagccagttgttttc
acctatgatgagtacaacaagggcttcctggatcagatgtcaggcagtgctgttctaatg
ctgcatgctgatgacagagtctatgtccaggtccctgatgaggagagtaatggtatattt
gcagcagataatgttcactgcgctttctctgggttcctgattgcctcaacgtga
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