Xiphias gladius (swordfish): 120791697
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Entry
120791697 CDS
T07311
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120791697 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120791697 (exosc5)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120791697 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120791697
NCBI-ProteinID:
XP_039986202
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Position
LG7:24537628..24546167
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AA seq
236 aa
AA seq
DB search
MTTSPRDTPLFLNGGGMMEVCGASNVTLREFGCEQNLLSRPDGSASFIQGDTSVLAGVYG
PAEVKVSKEIYDRATLEVLIQPKVGLPSVRERSQEQCVRETCEASLLLSLHPRSSLTLIL
QVLHDDGSLLSCFLNAACMALMDAGLPMSCLFCGVTCAIDADGQIITDPTAAQEKESRAL
MTFAVDSTEGRVLMSSTKGSFSVHELQQCIAISQKASEKIFQFYRDSVRRRYSKTL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatccccccgcgacacaccgcttttcctcaacggtggcggcatgatggaggtg
tgcggtgcctcaaatgttaccctgagagagtttggctgcgagcagaacctactgtctcga
cctgacggatctgcgtccttcatccaaggagacacaagtgtgttggctggagtgtacgga
ccagctgaggtcaaagtcagcaaggagatctatgaccgggcaacgttggaggttttgata
cagcccaaagttggtctgccaagcgtaagggagcgatcccaggagcagtgtgtgcgagaa
acctgcgaggcgtctctgctcttgtcgctccatcctcgctcctccctgactctcattctt
caggtgttgcatgatgatggttcactcttgtcctgctttttgaatgccgcctgtatggct
ctcatggacgcaggcctgcctatgagttgcctgttctgcggcgtgacctgtgccatcgac
gcagacggtcaaatcatcacagaccccacggcagctcaggaaaaggaaagtcgagctttg
atgacctttgcagttgacagcacagaaggcagagtattgatgtcgtcaaccaaaggatcc
ttttcagttcacgagctgcagcagtgtatagccatcagtcagaaagcatcagagaagatc
ttccagttctacagggactctgtcaggcggcgatactccaaaaccctctga
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