Xiphias gladius (swordfish): 120792300
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Entry
120792300 CDS
T07311
Name
(RefSeq) SR-related and CTD-associated factor 4-like isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xgl03021
]
120792300
03041 Spliceosome [BR:
xgl03041
]
120792300
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120792300
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
120792300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
FMP27-BLTP2_C
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
120792300
NCBI-ProteinID:
XP_039987317
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Position
LG7:22453101..22477180
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AA seq
762 aa
AA seq
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MDAVNAFNMELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV
PGLYVVDSIVRQSRHQFGVDKDVFGPRFLKNFTDTFQNLYRCPEDDKSKIVRVLNLWQKN
GVFDMDIIQPLMDMANGAIVPPPALEVPADPQPQIQPPITSASTVTAVPQLPTPDALAAV
AQLFQSPHGQELQRMLQNFQQTDKTLATTIANDIPHPPQMPVAQLKPYSAHTEKKSSLAE
KLLDRFDYDDEPEDITPKDQSAQSQCIPENVFNQFPGQMPNTENVHPHMMGQTGGIEQGG
GMSHGEHYMMPDGCHSINEAYSQSRGNSREDSNMRRESRHRGYGRRSRSRSGSRSPRRRR
SRSSSRSRRSRHQRSHSHSREQRWRSRSRSQDRSEREKDRERRQKGLPSIKTQTLSVCST
TLWVGQLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYTALNKLSRGSY
KVNQKPVKIAWALNKGIKSAHKKFWDVERGVTYIPWSKVKFEELESYREGGMLDTETLNP
EWNNAMDLNKQAAVNGALESVPADGTVTAHIQVPAVQLAAPIGSPPAFPGPIMLSPTAMP
HGGAPFIPTEFDPTNLAPAGSVKPLEDSIQDPKRDKGTPSDVGSDNQLGSPSATAMTMSG
PAAIQSPRPGMPPLQPHPGMGNPHLPPFLSPPNMPHMPPQMMPGGPMFRPERFRMPMPFP
PRGPAFHRHPSMGPEGMDDREERHFRNGRPGFGCPPFHRGRW
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtgaacgcgttcaacatggagttgttctccatgattgacatgaagcctcca
atatcccgtgctaaaatgatgtctgtaacaaagtcagccatcaaagctatcaagctttac
aaacatgttgtccagatagttgaaaagttcatcaagaagtgcaagccagaattaaaagtc
cctggtttgtatgtggttgattccatcgttcgacaatcacgccatcagtttggtgttgac
aaggatgtatttgggcctagattcttgaagaacttcacagataccttccaaaatctttat
cgctgcccagaggatgataagagcaaaattgtccgtgtcctgaacctctggcagaagaat
ggtgtgttcgacatggacatcattcagcctctgatggatatggcaaatggagccattgta
cctccacctgcattggaagttcctgctgacccccaaccacagatacagcctcctatcaca
agtgcctcaactgtgactgctgtgccccagctacccactcctgatgccttagctgctgtg
gcacagctgtttcagtccccccatggtcaggagctacagaggatgctccaaaacttccag
cagacagataagaccctggcaacaacaatcgcaaacgacataccacaccctccccagatg
cctgtggcccagctcaaaccgtacagtgcacacacagaaaagaaaagctctttagctgag
aaactccttgatcgttttgactatgatgatgaacctgaggatataactcctaaagaccag
agtgcccagtcacaatgcattcctgaaaatgtatttaaccagtttcctggtcagatgccc
aacacagagaacgttcatccacatatgatgggacagactggtggtatagagcaaggtgga
ggaatgagtcatggtgaacattatatgatgccagatggatgtcattccataaatgaggca
tattcacaatcgcggggaaattcaagagaagactcaaatatgagacgggagagtagacac
agaggctatggcaggagatcaagatccagatctggttccagatctcccaggagaagacgg
tcaagatcttcatcccgctcaagaaggtcaaggcatcaacgctctcattctcactccaga
gaacagcgctggagatctcgctctcgttctcaagacaggagcgaaagagagaaggacaga
gagcgcagacagaaaggtcttcccagtataaaaacccagacactcagcgtttgcagcact
acgctttgggttgggcagctagacaagaaaactcagcaatctgatgtgatgtcccttttg
gaagagtttggccagattgagtccatcaatatgattcctccgaggggttgcgcctatatt
gttatggttcacagacaagatgcctatacagctttaaacaagctcagtagggggtcatac
aaagtcaatcagaagccagttaagattgcttgggctttgaacaaaggtataaaatcggcc
cacaaaaagttctgggatgtggagcggggagttacctacattccctggagcaaagtcaaa
tttgaggagttggagagctatcgggaagggggtatgctggacacagagacacttaatcca
gagtggaataatgccatggacctcaataagcaggcagctgtaaatggagcattggaaagt
gtaccagcagatggaacggtcactgctcacattcaggtgccagcggttcaactggcagca
cccattgggagtccacctgctttccctggtcccatcatgctgtcccctacagccatgcct
catggaggagccccgttcatccccactgagtttgaccctacgaacttggcaccagcaggc
agtgtaaaacctctagaggactccatccaggatcctaaaagagacaaaggcacaccttca
gatgtaggaagtgacaaccagctgggctctccttcagcaacggcgatgaccatgtcaggc
ccagcagccatacagagtcccagaccgggtatgccgcctctgcagcctcaccctggcatg
ggaaatcctcatctacctccattcctctcacctcccaacatgccacacatgcccccgcaa
atgatgcccggcggacccatgtttcgaccggagaggttcagaatgcccatgcccttccct
cctcgtggccctgctttccatcgacatccttccatgggaccagagggcatggacgacagg
gaagagaggcacttccgaaatgggaggccggggttcgggtgcccacctttccacagaggg
aggtggtag
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