Xiphias gladius (swordfish): 120799920
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Entry
120799920 CDS
T07311
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xgl03000
]
120799920 (ubtfl)
03021 Transcription machinery [BR:
xgl03021
]
120799920 (ubtfl)
Transcription factors [BR:
xgl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
120799920 (ubtfl)
Transcription machinery [BR:
xgl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
120799920 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
NOA36
Motif
Other DBs
NCBI-GeneID:
120799920
NCBI-ProteinID:
XP_040001376
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Position
LG15:1349099..1364147
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AA seq
710 aa
AA seq
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MMNGSSSVSAAQSARIKSEPDNWSKEDCLTLLERIRSLLPDGDAMKYKTTESHFDWEKVC
FGSFTGDMCRQKWQKVSTEVRKYRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARF
KEDHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPEVSQKELKEALRRQWSQLSD
KRRLKWISKALELQKDYEDSMRAYHEAHPDVNSDDHVRSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQKKKQYDIDLQRF
LESLPEEERDRVLTEEKLGGARLGAGVASSPHRAKSPSVKERCREAEPEPWVPAGPPKER
RDGKKTAKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQTGMEAAWKSMEKKEKIPWIK
KAAEDQKRYEVQYQPVRELLEMRAPPAGQGQRKPKFDGEPKKPPVSGYQMFSQELLTNGE
LNHFSLKERMVEIGKRWHKLSQSQKDKYKKLVEEQQVEYKAELEAWVKSLSPQDRAVYKE
FSSSKRRSTTKARSSPGAKVRVTAKGKAVGSRAATPGVGVGKRAMAYRAKQDMSDTDEEE
EKSDSSDSDEDDETSGTTDSDDDDDENDDDDDEDDEDQTSSEESSDSDSD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcagcagcagcgtctccgcggctcagagtgccaggatcaaaagtgaacca
gataactggagtaaggaggactgtctgactctgttggagaggattcgcagcctgctgccg
gacggagacgccatgaaatataaaaccacagagtctcacttcgactgggagaaagtttgc
ttcggcagcttcaccggagacatgtgccgccagaaatggcagaaagtctcaaccgaggtt
cgtaagtacagaacaatgacagagctcatcgtggacgccatcgagttcgtgaagaacccg
tacaaaggcaagaaactgaagactcacccagatttccctaagaaacctctgactccgtac
tttcgcttcttcatggagaaacgagccaaatatgctaaaatccacccggagatgagcaac
ctggacctgaccaagatcctgtccaagaagtacaaggagcttcccgacaaaaagaagcaa
aaatacatcacagagtttcaacgagagaaagaggaatttgagaagaacatggctcgattc
aaggaggaccacccagagctgattgaggagaggaagaagtcggacttgccagagaaacca
aaaactccccaacagctgtggtacaaccacgagaagaagacctacatgaagctccaccca
gaggtgagtcagaaggagttgaaggaggctctgaggagacagtggtcccaactgtctgac
aagaggagactgaagtggatcagcaaggccctggagctccagaaggactatgaggacagt
atgagagcgtatcatgaagctcatccagatgtgaactcagatgatcacgtccggtccgtc
ctcaccaaagcagagcggcagctgaaagacaagtttgacggacggccgacaaaaccacca
cctaacgggtactctctgtactgcgccgagctgatggtgaacatgaaggatgtgcccagc
accgagcggatggttctctgcagtaaacagtggaaaatgatgacgcaaaaagagaaggac
atgtttcagaaacgctgcgagcagaaaaagaagcagtacgacatcgacctgcagaggttt
ctagagagtcttccggaggaggaacgagaccgagtcctgaccgaggaaaaactgggtggg
gcacgactgggagccggcgtggcctccagcccgcacagagccaagtctccatcggtcaag
gagcggtgtcgggaggcggagccagagccatgggtacctgccggaccgccaaaagaaaga
cgggatgggaagaagacggcgaagcttccagagacgccaaaaacagctgaggagatgtgg
caacacagcgtgatcggagactatctggctaaatacagaagtgaccgcaggaaggcccag
acggggatggaggcggcctggaagtcaatggagaagaaggagaagattccttggatcaag
aaggcggcggaggaccagaagcgttacgaggttcagtaccaacctgtgagggagctgttg
gagatgagggctccaccggcaggacagggtcagaggaaacccaagtttgatggagaacca
aagaaacctccagtgagcgggtatcagatgttctcccaggagctgctgaccaatggcgaa
ctgaaccacttcagtctgaaggagcggatggtggagatcgggaagaggtggcacaagctg
agccagagtcagaaagacaagtacaagaagctggtggaggagcagcaggtggagtacaag
gccgagctggaggcctgggtcaagtctctgtctcctcaggatcgagccgtctataaagag
ttttcctcctcgaaacgtcgcagcaccactaaagctcgcagcagtcccggagccaaagtc
cgcgtgacggcgaaggggaaggctgtaggttcgagagccgcaacgccgggggtcggggtg
ggcaagagagccatggcgtaccgggccaagcaggacatgtctgacacggacgaggaggag
gagaaaagcgactcgtccgactccgatgaggatgatgagacatcgggaaccacagacagc
gacgatgacgatgacgagaacgacgacgatgatgatgaggatgatgaagatcaaacctcc
tccgaggaatccagtgactcagactcagactag
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