Xiphias gladius (swordfish): 120800178
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Entry
120800178 CDS
T07311
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA helicase A [EC:
5.6.2.6
]
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xgl03041
]
120800178 (dhx9)
Enzymes [BR:
xgl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120800178 (dhx9)
Spliceosome [BR:
xgl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120800178 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
AAA_19
ResIII
nSTAND3
AAA_14
Motif
Other DBs
NCBI-GeneID:
120800178
NCBI-ProteinID:
XP_040002005
LinkDB
All DBs
Position
LG15:complement(618175..639187)
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AA seq
1315 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPNYDIRAAGNKNRQKFMCEVRVDGFNYIGMGNSTNKKDAQTN
AARDFVNYLVRVGEMSAAEVPALGVSAPCVDQPDGGGGFGNLPSSGPLPPHLVVKAEQEE
GSGGGPVPGVTGLGYSGGGNSGWGGGGGGGGAQWDRGANLKEYYARRDEQEAQATLESEE
VDLNANLHGNWTLENAKARLNQFFQKEKTSAEYKYSQVGPDHNRSFIAEMQLFVKQLGRR
ITAREHGSNKKLAAQSCALSLIRQLYHLGVIEAYSGVTKKKEGETLEAFEVSVSPELQQQ
LASVVQELGVHIPPPPADPSSSVSLVQGKMATFEPSQRQSGAGVVPWSPPQVNWNPWTSS
NIDEGPLAYCTPEQISGDLHDELMCQLEHDDNLQKILAERDQLPVKQFEEEIMAAVDSSP
VVIIRGATGCGKTTQVPQYILDRYIKGGRASDCNIVVTQPRRISAVSVAERVAYERGEDI
GKSCGYSVRFESVLPRPHASVLFCTVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLMV
VLRDVVQAYPEVRIILMSATIDTTMFREYYFNCPIIEVFGRTFPVQEYFLEDCIQMTNFV
PPPMDRKKKEKDEEGGDDDTNCNLICGPEYTAETKHSMAQINEKETSFELVEALLRYIET
LQVAGAVLIFLPGWNLIYSMQRHLETNPHFGSNRYRILPLHSQIPREEQRKVFEPVPDNI
RKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAG
RVRPGFCFHLCSHARFERLETHMTPEIFRTPLHEVALSIKLLRLGAIGNFLSKAIEPPPL
DAVIEAEHTLKELDALDTNDELTPLGRILARLPIEPRLGKMMIMGCIFHVGDAMCTISAA
SCFPEPFINEGKRLGFVHRNFAGSRFSDHVALLSVFQAWDDVRINGEEAESRFCEHKRLN
MSTLRMTWEAKVQLKEILVNSGFPEECLMTQMFNTVGPDNNLDVVVSLLTFGSYPNVCYH
KEKRKILTTEGRNALIHKSSVNCPFSSHDMTYPSPFFVFGEKIRTRAISAKGMTLVSPLQ
LLLFACKKISSNGDIVELDDWIKLRIPHEVGGGVAALRAGLEALVVEVTKDPEYIRQMDQ
TNQRLLNVIRHVSRPSAAGLNMMSNAQRMGDGPRPPKMGRFDGAGGYQGGGGGGGGGGYR
GGGGGYRGGGGSGYRGGGGGYGGGGGYRGGGGGYRGGGGYGGGGGYRGGGGYRGGGGGGG
GGGGGGGGYRGGGGGVGGGYRGGGGGGGYRGGGGGGGGGYRGGGGGGGGGYRGGF
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcaagaacttcttgtatgcctggtgtgggaaaaagaagctgactcccaac
tacgacatccgagccgcagggaacaaaaataggcagaagtttatgtgcgaggtccgagta
gatggcttcaactacatcgggatgggaaactccaccaacaagaaggacgctcagaccaac
gctgccagggacttcgtcaactacctggtccgagtcggggaaatgagcgcagcagaggtc
ccagctctgggggtgagcgctccatgcgttgatcagcctgacggaggaggcggcttcgga
aacctcccctctagtggtcctctgccgccccaccttgtagtgaaagctgagcaagaagag
ggcagcggtggggggccggttccaggagtgactggactgggttactcaggaggaggaaac
tctggctggggaggagggggagggggaggaggagctcaatgggaccgaggagccaacctg
aaggagtactacgccaggagagacgaacaggaagcacaggcgactctggagtcggaggag
gtggacctgaacgctaatcttcacggtaactggaccctggagaacgccaaggcccgccta
aaccagttcttccagaaggagaaaaccagcgcagagtataaatacagccaagttggaccg
gaccacaacaggagcttcatagcggagatgcagctgtttgtgaaacagctgggcagaagg
atcacagctcgagagcacggctccaacaagaagctggcggcccagtcgtgtgcgctgtct
ctgatccgacagctgtatcatctgggagtcatcgaggcgtactccggagtcaccaagaag
aaggaaggggaaactttggaggcatttgaggtcagcgtgtctccagagcttcagcagcag
ctggccagtgtcgtccaggagctcggagtccacatccccccaccgcctgcagaccccagc
agctcggtgtctctggttcaggggaagatggcgacgttcgagccgtcacagcgtcagagc
ggagccggagtcgtcccctggtcaccacctcaggtcaactggaatccctggaccagcagc
aacatcgacgaaggaccactggcctattgcactccggagcagatcagcggcgacctgcac
gatgagctgatgtgccagctggaacatgacgacaacctgcagaagatcctggcggagcgc
gaccagctgcccgtgaaacagtttgaggaggagatcatggcggccgtcgacagcagcccc
gtggtgatcatcagaggagcgacgggctgcggtaaaaccactcaggttccgcagtacatc
ctggaccgctacatcaagggaggccgagcgtccgactgcaacatcgtggtcacccagccc
agacggatcagcgccgtgtccgtggccgagcgagtcgcctacgagagaggggaggatatc
gggaagagctgcggctacagcgtccgcttcgagtccgtcctccctcgaccccacgccagc
gtcctcttctgcaccgttggcgtcctactgcggaagctcgaggcaggaatcagaggcatc
agtcacgttatcgtcgacgagatccacgagagagacatcaacacggacttcctgatggtg
gtcctcagagacgttgtccaggcttacccagaggtccgcatcatcctcatgtcggccacc
atcgacaccaccatgttcagagaatactacttcaactgtcccatcatcgaggtgttcgga
cgaaccttccctgttcaagagtatttcttggaagattgtattcagatgaccaacttcgtc
cccccaccaatggaccgaaagaagaaagaaaaagacgaggagggaggagacgacgatact
aattgtaatttgatctgtgggccggagtacacggcggagacgaagcattcgatggctcag
attaatgagaaggagacatccttcgagctggtcgaagctcttctgaggtacatcgagacg
ctgcaggtggccggagccgtgctcatcttcctgcccggctggaacctcatctactccatg
cagagacacctggagaccaacccgcactttggaagtaaccgataccggatcctgccgctc
cactctcagatcccccgagaggagcagaggaaggtgtttgaaccggttcctgacaacatc
aggaaggtgattctgtccaccaacatcgcagagacgagtatcaccatcaacgacgtcgtc
tacgtcatcgactcctgcaagcagaaggtgaagctcttcacctcccacaacaacatgacc
aactacgccacagtctgggcctccaagaccaacctggagcagaggaaaggtcgagctgga
cgagttcgacccgggttctgcttccacctctgcagccacgcccggtttgagaggcttgag
actcacatgactccggagatcttcaggactccgctgcacgaagtcgctctgagcatcaaa
ctgctgagactcggagccatcggaaacttcctgtccaaggccatcgagccgccgccgctg
gacgctgtcatcgaggccgaacacactctgaaagagctggatgctctggacactaacgac
gagctcacccccctgggacggattctggctcggctccccatcgaaccccgactggggaag
atgatgatcatgggctgcatcttccatgtcggagatgcgatgtgcaccatctcagccgcc
tcctgtttcccggagcctttcatcaatgagggaaaacgcctcggcttcgtccacagaaac
tttgccggcagccgtttctctgatcacgtggctctgttgtctgttttccaggcctgggac
gacgtcaggattaacggtgaggaggcagaaagtcgtttctgtgaacacaaacgtctcaac
atgtcgactctgaggatgacctgggaggccaaagtccagctgaaggagatcctggtcaac
tctggattccctgaagagtgtctgatgactcagatgttcaacacggtgggaccagacaac
aacctggacgtggtggtttctctgctgaccttcggctcctacccgaacgtctgttaccac
aaagagaagaggaagatcctgaccaccgagggacgcaacgccctcatccacaaatcctcc
gtcaactgtccgttcagcagccacgacatgacctacccgtcgcccttcttcgtcttcggc
gagaagattcgaacccgagcgatctcggctaaagggatgactctggtcagtcctctgcag
ctgctgctgttcgcctgcaagaagatcagctccaacggagacatcgtggagctggacgac
tggatcaaactgaggattccccacgaggtgggcgggggcgtcgcggcgctgcgggccgga
ctggaggctctggtggtggaagtgaccaaagacccggaatacatcagacagatggaccag
accaaccaacggctcctcaacgtcatcagacacgtctccaggccctcggcagccggactc
aacatgatgagcaacgcccagaggatgggagacggtcctcggcctccgaagatgggacgc
tttgatggagcaggaggctaccaggggggaggaggaggaggaggaggggggggatacaga
ggaggaggggggggatacaggggaggaggaggaagcggttacaggggaggaggaggtggg
tacgggggaggtgggggttacagaggaggtggaggaggctacagaggaggtggtggatat
ggaggaggaggaggttatagaggaggagggggctacagaggaggtggaggtggaggagga
ggaggaggaggaggaggaggaggataccgagggggagggggaggagtcggaggaggatac
cgagggggaggaggtggaggaggataccgagggggaggcggaggaggtggaggaggatac
cgagggggaggcggaggaggtggaggaggataccgaggaggtttttaa
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