Xiphias gladius (swordfish): 120807035
Help
Entry
120807035 CDS
T07311
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
xgl
Xiphias gladius (swordfish)
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xgl00535
]
120807035 (optc)
Proteoglycans [BR:
xgl00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
120807035 (optc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
120807035
NCBI-ProteinID:
XP_040014596
LinkDB
All DBs
Position
LG21:complement(30474715..30522721)
Genome browser
AA seq
333 aa
AA seq
DB search
MFELRMSLQSLMVAPVLVLVILSPCPGIAAPPGEPDDEAFDMENYDLNNETEWENLDINI
YGDSYDYEDLDQEIEVGTVAPDTPPPAIQPIAQQYEEEVTLPTLAPAPVSLDFKGPGLFG
PETGLGMPICLLCVCIGGSVYCDDMGLDQIPPLPKDTTHFYGRFNKIRHVKKTDFINLNK
LQSIDLTGNQISGMDEDVFRSLTQLQELSLADNNMQFLPELPITMKRIDLRNNKLISRGV
HSEGFKDMSQLEFLYLSSNNLDYIPTPLPLSLRALHLQNNNIQSLHEDTFCNLHDRNFIR
RNLEDIRLDGNPLNINLFAKAYVCLPRLPVGSH
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagctgaggatgtctctgcagtctctgatggtggctcctgtcttggtcctggtc
atcctcagcccctgccctggcattgcagcccctccaggtgagccagatgatgaagctttt
gacatggagaactacgacctgaacaatgagacagaatgggagaacctggacatcaacatt
tatggagacagctatgattatgaggacttggaccaagagattgaggtgggcactgtagca
ccggacacccccccaccagccatccagcccatagctcaacagtacgaggaggaggtgacc
ctgcccacccttgctccagctcctgtttccctggacttcaagggaccaggactctttggc
cctgagactggcctgggtatgcctatctgcctactgtgtgtgtgtatcggcgggagtgtg
tactgtgatgacatgggcctggatcagatcccacccctgcccaaagacaccacccatttt
tatggccgcttcaataagatccgacatgtcaagaaaacagactttatcaatctcaataag
ctgcagtccattgatctaaccgggaaccagatctcagggatggatgaagatgtgtttcgt
tctctgacgcagctccaggagttatcgttggctgataacaatatgcagttcttgcctgag
ctgccaatcaccatgaaacgcatagatctacgcaacaacaagctgatcagtcgtggggta
cattctgagggattcaaggatatgagccagctggaattcctctatctgtccagcaacaac
ctggattacattcctacaccactgccactgagcttgagagcgttacacctgcagaacaac
aacatccaatcgctgcatgaggacaccttctgtaacctccatgatcgcaacttcatccgc
cgtaacctggaggacatccgtctggacggcaaccccctgaacatcaacctatttgccaag
gcctatgtttgcctgccacgcctgcctgtaggaagtcactga
DBGET
integrated database retrieval system
