Xanthomonas hydrangeae: LMG31886_20330
Help
Entry
LMG31886_20330 CDS
T07925
Symbol
sdhA
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00020
Citrate cycle (TCA cycle)
xhd00190
Oxidative phosphorylation
xhd00650
Butanoate metabolism
xhd01100
Metabolic pathways
xhd01110
Biosynthesis of secondary metabolites
xhd01120
Microbial metabolism in diverse environments
xhd01200
Carbon metabolism
Module
xhd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xhd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xhd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LMG31886_20330 (sdhA)
00650 Butanoate metabolism
LMG31886_20330 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LMG31886_20330 (sdhA)
Enzymes [BR:
xhd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LMG31886_20330 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CAD7734177
LinkDB
All DBs
Position
LMG31886:2431295..2433085
Genome browser
AA seq
596 aa
AA seq
DB search
MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEEGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMADGTLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPVQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTVE
IREGRGVGEHKDHILLDLTHLGPEVINEKLPGIAESAHIFAGVDVTKQPIPVLPTVHYNM
GGIPTNFYGEVVRKQGDDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKPNQPHKMLPSDACDKALGLLDKLRYANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHSHEDFPDRDDVNWQKHTLVTVDDKGKCEFEYRPVHMYTLSQDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttataagattacggaacacaagtacgacatggtcgtggtgggcgccggcggc
gccggcctgcgcgccacgttcggcctggcccagaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccggtcgcataccgtcgcagcgcagggcggtatttccgccgcgctc
ggcaacatgggcgaagacgactggcgctaccacttctacgacaccatcaagggctccgat
tggctgggcgaccaggacgcgatcgagtacatgtgtcgcgaggcgatcccggccatcatc
gaactcgaacattacggcgtgccgttctcgcgtaccgaagaggggaagatctatcagcgc
ccgttcggtggcatgaccaccaagtacggcgaaggcccgtctgcacagcgcacctgcgcg
gcggccgaccgtaccggtcacgccatgttgcacacgctgtatcagcagtcgctggcgcat
aacgcgcgtttcatgatcgagtactttgcgctcgatctgatcttcgacgaagaaggcgtc
tgccgcggcgtgcttgcgctggacatggcggacggcaccttgcatctgttccgtgcccac
ggcgtggtgctggccaccggcggctatggccgtgcctacttcagcgccacctccgcccac
acctgtaccggtgacggcggcggcctggtgatgcgtgccggcctgccggtgcaggacatg
gagttcgtgcagttccatcccaccggcatctacggtgcgggctgcctgatcaccgagggt
gtgcgcggcgaaggcggcatcctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcaccgcattacaaggatctggcatcgcgcgatgtggtctcgcgctcgatgacggtggag
atccgcgaaggccgtggcgtgggcgagcacaaggatcacatcctgctcgacctgacccat
ctcggcccggaagtcatcaacgaaaagctgcccggcattgccgaaagcgcgcacatcttt
gccggtgtggacgtgaccaagcagccgatcccggtgctgccgaccgtgcactacaacatg
ggcggcattccgaccaatttctacggggaagtcgtgcgcaagcagggcgacgacccggat
gccgtggtgcctggcctgtacgcgatcggtgaagccgcctgcgtgtcggtgcacggtgcc
aaccggttgggttccaactcgctgctggatctggtggtgttcggccgtgcggtggcaaac
cgctgcgccgagacggtcaagcccaaccagccgcacaagatgttgccgtcggatgcctgc
gacaaggcgctcggcctgctggacaagttgcgctacgccaacggctccacgccgacctcg
gtgatccgcgacaacatgcagcgcaccatgcagtccgatgctgcggtgttccgcaccagc
aagacgctgaaggaaggcgtggacaagatggccgagatcttcgccaccttcgaagacgtc
aaggtctccgaccgctcgctggtctggaactcggatctgatcgagacctacgagttgaac
aacctgctgctcaatgcggtggcgacgatcaattcggccgagcagcgcaaggaaagccgt
ggcgcgcattcgcacgaagacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtcactgtcgacgacaagggcaagtgcgagttcgaatatcgcccggtgcacatgtac
acgctgagtcaggacgtggatgtcgtcccgccgaagccacgcgtctactga
DBGET
integrated database retrieval system
