Xanthomonas hydrangeae: LMG31886_23490
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Entry
LMG31886_23490 CDS
T07925
Symbol
ntrC
Name
(GenBank) DNA-binding transcriptional regulator NtrC
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd02020
Two-component system
xhd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMG31886_23490 (ntrC)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LMG31886_23490 (ntrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhd03000
]
LMG31886_23490 (ntrC)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xhd02035
]
LMG31886_23490 (ntrC)
Transcription factors [BR:
xhd03000
]
Prokaryotic type
Helix-turn-helix
Other families
LMG31886_23490 (ntrC)
Bacterial motility proteins [BR:
xhd02035
]
Flagellar system
Flagellar assembly proteins
Others
LMG31886_23490 (ntrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
AAA
TIP49
AAA_7
UPF0175
bpMoxR
MCM
Motif
Other DBs
NCBI-ProteinID:
CAD7736021
LinkDB
All DBs
Position
LMG31886:2795101..2796585
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AA seq
494 aa
AA seq
DB search
MSESRILLIDSDAVRAERTVSLLEFMDFNPRWVTDGADINPGRHRHDEWMAVMVGSAQDA
AQADKFFDWLADAKLPPPVLLMEGSPSAFAQTHGLHEANVWTLDTPLRHAQLEALLRRAS
LKRLDAEHQAGVQQDTGPTGNSEAVTRLRRLIDQVAAFDTTVLVLGESGTGKEVVARAIH
QHSPRRDGPFVAINCGAIPPDLLESELFGHEKGAFTGALSTRKGRFEMAEGGTLLLDEIG
DMSLPMQVKLLRVLQERSFERVGGGQTIRCNVRVIAATHRNLETRISDGQFREDLFYRLN
VFPIEMPALRERVDDLAILVQTIAGQLARTGRGEVRFADEALQALRSYDWPGNVRELTNL
VERLAVLHPGGLVRVQDLPARYRGDFATATALELPPEPALVAAPAEVSALPSNVVTLQPK
SATTEPATASSLPDDGIDLRGHMANIELALINEALERTQGVVAHAAQLLGLRRTTLVEKL
RKYGIDREQTELAN
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcccgcattctgttgatcgacagcgatgccgtgcgcgccgagcgcacggtg
tcgctgctcgagttcatggacttcaatccacgctgggtcaccgacggcgccgacatcaat
cctggccgtcatcgccacgatgagtggatggcggtgatggtgggctcggcgcaggatgct
gcacaggccgacaagttcttcgactggctggccgatgccaagctgccgccaccggtgttg
ctgatggaaggcagcccgagcgcgtttgcgcagacgcacgggctgcacgaagccaacgtc
tggacgctggacacgccgctgcgtcacgcgcagctggaagccttgttgcgccgtgccagc
ctcaagcggctggatgccgagcatcaggccggcgtgcagcaggacaccggcccgaccggc
aacagcgaggcagtgacccgcctgcgccgcctgatcgaccaggtggcggcgttcgacacc
acggtcctggtgctgggcgaatctggcaccggcaaagaagtcgtcgctcgcgccatccac
cagcactcgccacggcgcgatgggccgtttgtggcgatcaactgcggcgcgattccgccg
gacctgttggaaagcgaactgttcggccacgaaaaaggcgcctttaccggcgccctgagc
acccgcaagggccgcttcgaaatggccgagggcggcacgctgctgctcgatgaaatcggc
gacatgagcctgccgatgcaggtgaagctgctgcgcgtgctgcaggagcgcagcttcgag
cgcgtgggcggtggccagaccatccgctgcaacgtgcgggtgatcgccgccacccaccgc
aatctggaaacgcgcatcagcgatggccagttccgcgaggacctgttctatcgcctcaac
gtgtttccgatcgaaatgccggcgctgcgcgaacgcgtggacgacctggccattctggtg
cagaccatcgccgggcaactggcgcgcaccgggcgcggcgaagtgcgctttgccgacgaa
gccttgcaggcgctgcgcagctacgactggccgggcaacgtacgcgagctgaccaatctg
gtggagcgccttgcggtgctgcacccgggcggtctggtgcgcgtgcaggatctgccggca
cgctatcgcggcgattttgccacggccactgcgctcgaacttccgcccgaaccggcgctg
gttgctgcgcctgcagaggtcagcgcattgccgagcaatgtagtgacgctgcagcccaaa
tcggccaccaccgaaccggccaccgcgtccagcctgcccgacgatggcatcgacctgcgt
ggtcacatggcaaacatcgagctggcgctgatcaacgaagcgttggaacgcacccagggc
gtggtggcgcatgcggcccaactgctcggcctgcgccgcaccacgctggtggaaaagctg
cgcaagtacggcatcgatcgcgagcaaaccgagctggcgaactag
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