Xanthomonas hydrangeae: LMG31886_44340
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Entry
LMG31886_44340 CDS
T07925
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LMG31886_44340 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhd03400
]
LMG31886_44340 (recD)
Enzymes [BR:
xhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LMG31886_44340 (recD)
DNA repair and recombination proteins [BR:
xhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LMG31886_44340 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
AAA_22
UvrD_C
RecD_N
DEAD
AAA_16
T2SSE
nSTAND3
SLFN-g3_helicase
AAA_28
ATPase
Rad17
Motif
Other DBs
NCBI-ProteinID:
CAD7747736
LinkDB
All DBs
Position
LMG31886:complement(5172885..5175110)
Genome browser
AA seq
741 aa
AA seq
DB search
MNQPNLFSALIKADALRPLDLALAQSLQRLAPDTDPQVLAGAALASLAVTSGHAGLDPAR
AGMLLDARESPAPALPDPADWQRTLAASRWVDQPNPEDPAAADCPLVLEHGLLYLRRYRE
YERRLALGLQRIAAQSPPPFDAATLAPLFAQLFPNAAASSPLPPGEGARRAGEGTGLPEP
SVDQKGKAPPKPSHHQDVTNPPAPSHSQDRQAQAAALALRRTLLLVTGGPGTGKTTTIAR
LLLLRIAQAHASNTPAPRIALAAPTGRAAERMAESLRLAVTRAIANGIDPALADALPSSA
STLHRLLGVIPDSPQFRHTADNPLPFDLIVVDEASMVDLPLMCKLVEAVADGTQLILLGD
ADQLPSVEAGDVLAAILQAAGPGDTLQPQDADALQPLLGSTPTSSTPASTQTGGHTVSHT
HSGGLAGHRVHLLRGYRQADDFALAPLADAVRAGDADTALALLRSGELAGVHFHEDGEDP
LTLGRDALLAHWRALADAHDPAAALRDAARLRLLTAVRAGPQGARGLNARIEQLLAETGS
GARRLGSASPWFQGRLLLITENSYRHGLFNGDVGICLRSDASPSSGRSDEGPSSPPGQSA
ATANRHAPGTDSRAQGPLVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDTV
WLQLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRAALARHAARISGLAWRLGAEQQ
AAPARPATESPTALPVQGSLF
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccaaacctcttcagcgcgctgatcaaggccgacgcgctacgcccgctggat
ctggcactcgcgcaaagcctgcaacgcctggccccggacaccgacccccaggtcctggcc
ggcgccgcgctcgcctcgctggccgtcaccagcggccacgcagggctggaccccgcccgt
gccggcatgctgctggacgcgcgcgagagcccagcgcccgcactgccggaccccgccgac
tggcaacgcaccctggccgcctcgcgctgggtcgaccagccgaacccggaagaccccgcc
gccgccgactgcccgctggtcctcgaacacggcctgctctacctgcgccgctaccgcgag
tacgaacgccgcctggcgctgggcctgcaacgcatcgccgcccagtcgccgccgcctttc
gacgccgccacgctggccccgctgttcgcgcagctattcccgaacgcagccgcctcatcc
cctctccccccgggagagggtgcccgaagggcgggtgagggtacgggcctgcccgagcca
tctgtcgaccaaaaaggtaaggccccacccaagccatcccaccaccaagacgttacgaac
ccaccggccccatcccactcccaagaccgccaggcccaggccgccgccctcgccctgcgc
cgcaccctgctgctggtcaccggcggccccggcaccggcaagaccaccaccatcgcgcgc
ctactgttactgcgcatcgcccaggcacatgcatccaacacaccggccccgcgcatcgcc
ctggccgcgcccaccggccgcgccgccgagcgcatggccgagagcctgcgcttagcggtc
acgcgcgccatcgccaacggcatcgacccggccctggccgacgcactgcccagcagcgcc
agcaccctgcatcgcctgcttggcgtcatccccgattccccgcagttccgccacaccgca
gacaacccgctgccgttcgacctgatcgtggtcgacgaagcctcgatggtcgacctgccg
ctgatgtgcaagctggtcgaagccgtggccgacggcacccagctgatcctgctcggtgac
gccgaccagctgccctcggtggaagccggcgacgtgctcgccgccatcctgcaggccgcc
ggccccggcgacaccctgcagccgcaggatgccgacgcgctgcagccgctgctcggcagt
acgcccactagcagcacgcctgcaagcacccagacaggcggccacaccgtcagccacacc
cacagcggcggcctggccggccatcgcgtgcacctgctgcgcggctaccggcaggcggac
gactttgcactggccccgttggccgacgccgtgcgcgccggcgacgccgacaccgccctg
gccctgctgcgcagcggcgagctggccggcgtgcacttccacgaagacggcgaagacccg
ctcaccctgggccgcgacgcactgctcgcgcactggcgcgcgctggccgacgcgcacgac
ccggccgccgccctgcgcgatgctgcgcgcctgcgcctgctcaccgccgtgcgcgccggc
ccgcagggcgcacgcggcctcaacgcccgtatcgaacaactgctggccgaaaccggctcc
ggcgcccgccgcctcggtagcgcctcgccctggttccagggccgcctgctgctgatcacc
gaaaacagctaccgccacggcctgttcaacggcgacgtcggcatctgcctgcgaagcgac
gcgagtccctcttcggggcgcagcgacgaaggcccgtcttcaccgccaggccagtccgcc
gccaccgccaaccgccacgccccaggcactgacagccgtgcccagggcccattggtcgcc
tggttcgaaggcgacggcgacggccaggtgcgcggcttccaccccgccgcactgcccgcg
cacgaaagcgccttcgccatgaccgtgcacaaggcccagggcagcgagttcgacaccgtc
tggctgcaactgcccacccgcgacgcccgcgtgctcagccgcgaactgctctacaccggc
atcacccgcgcccgccgcgccctgcacctggccggcagcgaagcggtcatccgcgccgcg
ctcgcccggcacgccgcccgcatctcgggcctggcgtggcggctgggtgcggagcagcag
gcggcacccgccaggccagcaacagaatcacccactgcgttgcccgtacaggggtcgttg
ttctga
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