Xiphophorus hellerii (green swordtail): 116719070
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Entry
116719070 CDS
T07363
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1 isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116719070 (wdhd1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
116719070 (wdhd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
Ctf4_C
WD40
ANAPC4_WD40
HMG_box
eIF2A
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
116719070
NCBI-ProteinID:
XP_032417327
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All DBs
Position
4:3207688..3236468
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AA seq
1105 aa
AA seq
DB search
MPCERKPMRYGHSEGHTEVCFDDTGRYIVTCGNDGDVRIWESLDDDDPKFITVGEKAYSL
ALKKGKLVTASSSNTVQIHTFPDGDPDGILTRFTTNATHVTFNRSGTRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVTFDPKDEYLASSSCDGSVVVWSIEQQTQVISWPLLQKT
NDVSNATSLCRLAFQPAAGKFLAVPVETRVHLYERGTWDHVGSLSDELLTQPVNVAAWSP
CGRFLAAGAIGGLLTIWDVNSRLVVERQKHEKGFTVCSLAWHPSGSQIVYTDTEGCLGLL
DGLGTSGTGTSSTKASAAKPKDYDDLFDEDDDRLMDEGLSDANSPVKKAAEDEDDDDFLI
PSTGRVRNRGAILNDENSLDTGSLKLGQDKFGDDEDDDAGSSVAPAAAQRPVYDGPVPTP
PQKAFQPGATPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAMHLTNSLGHT
MADLSQEAVLLACPSTDDLASKLQCLHFSCWDTSKEWMVDLPPGEDVKALCLGQGWAAVA
TSALLLRLFSVGGVQREIFSLPGPVVCMAGHGEQLLVVYHRATGFDGEQALGIQLLQFGL
RKRQLMNGEPLPLSPKSYLSWAGFTAEGTACYVDSNGLVRMLNRALGNTWTPVCNTRETC
KSKSDHYWVVGAHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTSTEKGQMEEQ
YWRSVLFHNHYSFLSSSGYEVDEAAQTQSDKEQQELLMKMFALSCKLEREFRCVELAELM
TQNVVTLAIRYASRSRRMNLAQRLSEIALEKSTQLQEDEEPEDEPEFTSDRRTSGYRQSE
PYNTRQNEEEEDDEEEERVEEEDRREMETEETKRRLNPFAKESGLPAKPSLTPVGRVGRS
NPFKVADSGKPTSSSGQPRASNILDNMRSSRKLAPLSGSAGKPSKGPVLKPLAPRTKAKA
QSTLLQISSNKMPSKKTPEAAEPAADLQKQPDVVAPPAENTENKRPKTGFQLWLDENRKI
IIADNPDLDETDVIKEAMGRFRTMSADERLSWTERAKGQSGDAADVKKRKRSENEAVESD
ESNAKKKSSSLDPSSKLSAFAFSKN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgccctgcgaaaggaagccgatgcgctacggccactcggagggacacaccgaggtctgc
ttcgatgacaccgggaggtatatcgtaacctgtggaaacgacggcgatgttcggatttgg
gaaagcctggatgacgacgatccaaagttcatcaccgttggggaaaaggcttactccctc
gcactcaagaaaggcaagttggtgacggcgagctccagcaacacggtgcagatccacacg
tttcctgacggcgatccagatggcatcctgacgcggttcaccaccaacgccactcacgtc
accttcaaccgcagcggcaccagagtcgccgccgggtccagtgacttcatggtgaaggtg
gtggaggtgtcagacagcagccagcagaaaacactgcggggtcacgaagcgcccgtcctc
agtgtgacctttgaccctaaagatgaatacttggcgtcttccagctgcgacggctcggtc
gtcgtgtggagcatcgagcagcagactcaggtgatcagctggccgttgctgcagaaaacg
aacgacgtcagcaacgccacgtctctgtgccgtttggcgttccagcctgcagccgggaag
tttttagctgttccagtagaaaccagagttcacctgtacgagcggggaacctgggatcac
gtcggctcgctgtccgacgagctgctcactcagcctgtgaacgtggcggcctggtcccct
tgcggccgcttccttgcagccggcgccatcggaggtttgctgacgatctgggacgtgaac
agccgactggtagtggaacggcagaagcatgagaaaggattcacggtgtgtagcttggcc
tggcatccatccggcagccagatcgtctacacggacacagagggctgcctgggcctgctg
gacggactcggcacctccggtaccggtaccagctccaccaaggcttcagctgcgaaacct
aaagactacgacgacctgtttgacgaggatgatgacaggctgatggatgaaggactaagc
gacgccaattcaccagtaaagaaggcggcggaggatgaggacgatgacgacttcctgatc
ccgtccacgggtcgagtgaggaacagaggcgccatcctgaacgatgagaactcgctggac
acaggatccctaaaactcggtcaagataagtttggtgatgatgaggatgatgacgccggc
agctctgtagccccggcggcggcgcagcgccccgtctacgacggcccggtgccgactcct
ccccagaaggcctttcagcccggagccacgccagctcacctcactcaccgcttcatgatg
tggaactctgtggggatagtgcgaggctacaacgacgagcaggacaacgccatcgacgtg
gagtttcatgacaccgccgtccaccacgccatgcacctcaccaactccctgggtcacacc
atggccgacctttcccaggaggccgtgctgctggcctgtccaagcaccgacgacctcgcc
agtaagctgcagtgcctccacttctcctgctgggacaccagtaaggagtggatggtggac
ctgccgccgggcgaggacgtgaaggcgctgtgtctgggtcagggctgggcggccgtcgcc
accagcgcgctgctgctgcggctgttctccgtcggcggcgtccagagggagatcttcagc
ctgccggggccggtggtgtgcatggccggccacggggagcagctgctggtggtttaccac
agagcgacgggtttcgacggagaacaagctctcggcattcagctgctgcagtttggtctc
agaaagaggcagctgatgaacggcgaaccgctccccctctcccccaagtcgtacctctcc
tgggctgggttcaccgccgaaggcacggcgtgctacgtggattcaaacgggctggtgcgg
atgctgaaccgcgccctgggcaacacgtggacgccagtttgtaacaccagagaaacctgc
aagagcaaatcggatcactactgggtggttggggcgcacgagaacccccagcagctcagg
tgtatcccatgcaaaggctcccggtatcctcccactctgcctcggccggctgtcgccatc
ctgccgtttaagctgccgctgtgtcagaccagcacagaaaagggacaaatggaggagcag
tactggcgttccgtcctcttccataatcactacagcttcctgtcctccagcggctacgaa
gtcgacgaggctgcgcagacgcagtcggacaaggagcagcaggagcttctcatgaagatg
tttgctttgtcctgtaaactggagcgggagtttcgctgcgtggagctggcggagctgatg
acccagaacgtggtgactctggcgatccggtacgcgtcccgatccaggcggatgaacctg
gcgcagcggctcagcgagatcgcgctagagaagtcgacccagcttcaggaagacgaggaa
cccgaagatgagccggagttcaccagcgacagacgcacctcgggttatcggcagagcgaa
ccttacaacacgaggcagaatgaggaggaggaggatgatgaagaagaagagcgagtggag
gaagaggacagaagggaaatggagaccgaggaaactaaaagacgtttgaatcctttcgct
aaagagtcgggtttacctgcgaagccgtcgctgacgccagttggtcgagttggaagatca
aaccccttcaaggtcgctgattctggcaagccgacgtcttcgtccggacaacctcgagcg
tcaaacatcctggacaacatgaggtccagcaggaagctggcgccgctcagcgggtcggca
ggaaaacccagcaaagggcccgtcctcaagccgctggctcccagaaccaaagccaaggct
cagtcaactctgctgcagatctccagcaacaagatgcccagtaagaaaactccggaggcc
gcggagccggccgcagatctgcagaaacagcctgacgttgtagcgccacctgcagaaaac
acagaaaataagaggccaaaaacgggcttccagctgtggctggatgagaaccggaaaatc
ataatcgccgataatccggacctggatgagacggacgtcatcaaagaggcgatgggacga
ttcaggacgatgtcagcagacgagagactgtcgtggacagaaagagcgaaaggacaaagc
ggagacgctgcagacgtgaagaaaagaaagagatcagaaaacgaagcggtggagagcgat
gaaagtaacgccaaaaagaagtcgtcgtcgctggatccgtcctccaagctgtctgcgttc
gcattcagcaaaaactga
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