Xiphophorus hellerii (green swordtail): 116721450
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Entry
116721450 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar transcription factor 1-A-like
KO
K09273
upstream-binding transcription factor
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116721450
03021 Transcription machinery [BR:
xhe03021
]
116721450
Transcription factors [BR:
xhe03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116721450
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116721450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
DUF4473
Motif
Other DBs
NCBI-GeneID:
116721450
NCBI-ProteinID:
XP_032421074
LinkDB
All DBs
Position
6:30534517..30542827
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AA seq
836 aa
AA seq
DB search
MAPRARWRPGPVSTAGPGSTENPTWFLETEPEPVRFSGAPSCCCCCISQTTAAQSCPLPA
SGGGGSTTSSRSPDPTQREVLEGSLVKLCSSKSLKDRWVCVCDCRASVTMNGSSSISAAQ
RIKAETDAWSQEDCLTLLERLRGLLPDGDAMKYKTTESHFDWDKVGFGRFTGDMCRQKWQ
KVSSEVRKYRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLTPYFRFFMEKRAKYAKI
HPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARFREEHPDLMEERKKS
DLPEKPKTPQQLWYNHEKKAYMKLHPEVSQKELKEALRRQWSQLSDKRRLKWISKALELQ
KDYEDSMRAYHEAHPDSNSEEHVRSVLTKAERQLKDKFDGRPTKPPPNGYSLYCAELMVN
MKDVPSTERMVLCSKQWKMLTQKEKDMFQKRCEQKKKQYDVDLQRFLESLPEEERDRVLT
EEKMGGAKLNVGVVPSPLRAKSPSVKERGREAEPEAWPAAAGGASAPRERRDARKTAKLP
ETPKTAEETWQHSVTGDYLAKYRSDRRKAQAAMEAAWRSMEKKEKIPWIKKAAEDQKRYE
VRYPPDPXPLRPDWLQCALTAAVLXRELLEMRAPPVGQRKPKFDGEPKKPPVSGYQMFSQ
ELLTNGELNHFSLKERMVEIGKRWQKLSQAQKDKYKKQVEEQQVEYKAHLEAWVKSLSPQ
DRAVYKEFSSSKRRSSSSKATASPVAKVRVTAKGKVGGARAVTPGVTVGKRAMAYRAKQD
MSDSDEEEEKSGSSDSDEDDETSGSSDSEDEDENDDDEEEDDDQSSSEESSELDSD
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggcccccagagctcggtggagacccggacccgtcagcacagcaggtcccggttcaaca
gaaaaccccacatggtttctcgaaacagaaccagagccggtccggttcagtggagctccc
agctgctgctgctgctgcatcagccagaccactgctgctcagtcctgccccctaccggcc
agcggaggaggaggcagcaccacctcctccaggagtcctgacccgacccaaagggaggtt
ctggagggttctttggtgaaactatgctcatctaaaagtttgaaggacagatgggtgtgt
gtgtgtgattgcagagcctccgtcacgatgaacggcagcagcagcatctctgcggctcag
aggatcaaggctgaaacagacgcgtggagccaggaggactgcctgacgctgctggagcgg
ctccgcggtctgctgcccgacggagacgccatgaagtacaaaaccaccgagtcgcacttc
gactgggacaaggtcggcttcggccgcttcaccggggacatgtgccgccagaagtggcag
aaggtctcctccgaggtccggaagtaccggaccatgacggagctcattgtggacgccatt
gagtttgtcaagaacccgtacaaaggcaagaagctgaagacccacccggacttccccaag
aagccgctgactccctacttccgcttcttcatggagaaacgggccaaatacgccaagatc
catccggagatgagcaacctggacctcaccaagatcctgtccaagaagtacaaggagctg
ccagataagaagaagcaaaagtacatcacagagttccagcgggagaaggaggagtttgag
aagaacatggcccggttcagggaggagcatccggacctgatggaggagaggaagaagtcg
gacctgccggagaaacccaagacgccccagcagctgtggtacaaccacgagaagaaggcc
tacatgaagctgcacccagaggtgagtcagaaggagctgaaggaggcgctgaggaggcag
tggtcccagctgtccgacaagcgcaggctgaagtggatcagcaaggcgctggagctgcag
aaggactatgaggacagcatgagggcgtaccacgaggcccacccagactccaactcagag
gaacacgtccgctctgtcctcaccaaggccgagagacagctgaaggacaagttcgatgga
cggcccaccaagccgccgccgaacggttactccctgtactgcgctgagctgatggtcaac
atgaaggacgtgccgagcaccgagcgcatggtgctgtgcagcaagcagtggaagatgctg
acccagaaggagaaggacatgttccagaagcgctgcgagcagaaaaagaagcagtacgac
gtggacctgcagcgcttcctggagagccttcctgaggaggagcgggaccgagtcctgaca
gaggagaaaatgggcggagccaagctgaatgtgggcgtggttcccagccctctcagagcc
aagtctccatcggtcaaggagcgcggccgggaggcggagccagaggcgtggccagcagcc
gcaggcggagcctcagcgcccagagagcgacgggacgccaggaagacagcgaagcttcca
gagacgccgaaaaccgccgaggagacgtggcagcacagcgtgacaggagattacctggcc
aagtaccggagtgaccgcaggaaggcgcaggcggcgatggaggcggcttggcgctccatg
gagaaaaaggagaaaattccctggatcaagaaagcagcagaggaccagaaacgttacgag
gttcggtaccctcctgacccctgacccctgcgtcctgattggctgcagtgtgcgctaact
gctgctgtcctctagagggagctgttggagatgagagcgccccctgtcggccagaggaag
cccaagttcgatggggagccgaagaagcctccagtgagcggctaccagatgttctcccag
gagctgctgacgaacggagagctgaaccacttcagtctgaaggagcgcatggtggagatc
ggcaagcgctggcagaagctcagccaggcgcagaaggacaagtacaagaagcaggtggag
gagcagcaggtggagtacaaggcccacctggaggcctgggtcaagtcgctgtccccacag
gaccgcgccgtctacaaggagttctcctcctcgaaacgtcgcagcagctcctccaaagcc
accgccagccccgtggccaaggtccgggtgacggcgaaggggaaggtgggcggagccagg
gctgtgaccccaggggtcaccgtggggaagagggccatggcatatcgcgccaagcaggac
atgtctgactccgatgaggaggaggagaagagcggttcctcagactctgatgaagacgat
gagacatcaggaagttcagacagcgaggatgaagatgagaacgatgacgatgaagaggag
gatgacgaccaatcttcctcggaggaatccagcgagttggactcagattag
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