KEGG   Xiphophorus hellerii (green swordtail): 116724857
Entry
116724857         CDS       T07363                                 
Symbol
dcc
Name
(RefSeq) netrin receptor DCC isoform X1
  KO
K06765  deleted in colorectal carcinoma
Organism
xhe  Xiphophorus hellerii (green swordtail)
SSDB
Motif
Pfam: Neogenin_C fn3 I-set Ig_3 Ig_2 ig Pur_ac_phosph_N V-set C2-set_2 Interfer-bind Ig_5 CRLF2-like_D2 Ig_4 Tissue_fac Sp38 V-set_CD47 Arylsulfotran_N Herpes_UL74 GH101_dom-5
Other DBs
NCBI-GeneID: 116724857
NCBI-ProteinID: XP_032426513
LinkDB
Position
8:1089420..1246036
AA seq 1531 aa
MELGALGCTGDVWRLLAPGMRMRRVYLLLLCWLLGAHSSAQASDAPSSSSSSSPSPGFVA
FSFTVEPQDTVTVRGGTLQLDCQAQAGSAAAGPASITWRKDGVLLSAVVDERRRQLENGT
LTVQNVVHSRHHRPDEGEYQCLATLDGLGSIVSRTAKVTVAGPLRVIVPTESVSSFLGDT
ALLRCEVSGDPRPVIRWQKNREDLPLSFQPESRLAVLPSGSLQVSRVQPPDSATYRCLAD
NPGSTRTGTDAELRVLPEPGLSRNLQFLQRPSRVTALLGTDAVLECSASGYPTPSIQWRR
GEEVIQSWNKKFSLLAGSNLIIRTVTDDDSGAYSCTAANKNQNITAQAELSVQVPPQFLN
YPTNSYAYEATDIELECAVTGNPLPAVRWMKNGEEVIPSDYFQIVDGTNLQILGLVKSDE
GFYQCVAENSAGGAQAMAQLLLREPEATPTQFSPALTPPLPPSGSPLTYSSSSDPPPVSP
SPGVALPSAPRDLVPVLVSSRFVRLSWRPPEETGGGVQTYGVYYSQAGVERERSVNVSEP
ESLELTVSNLKPEESYSFRVVAYSEAGPGRSSAPLQIATKPDLQVPSRVESLRALALSPT
SIQVSWEPPSLPNGPVLGYRLLWTESPSGKEQSVEVSGINYKMDGLNKFTEYTVRVLAVN
RYGPGTASETVTVTTHSDVPSAPPQNITLEVVLSRSIKVSWQPPPRSAQNGIITAYKIKY
RKTGRRGDQEAIEPNNFWYLFTGLEKGSQYSFQVAAMTVNGTGPCSDWYTAQTPENDLDE
SQVPDQPSSLHVRPLPNSIIMSWTPPLSPNILVRGYIIGYGVGSPYAETVRVDSKQRYYS
IENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSLTDPIDPLEDDLFHLFDKFPTPMPDT
STPMIPPVGVQAVALSSDSVRVSWADNSMTKNQKSSEVRYYSVKWKSSVSTSGKYKSADT
TALSHTVTGLKPNTMYEFAVMVTKGRRSSTWSMTAHATTYEAAPSSAPKDLTVISREGRP
RAVLISWQPPMEANGRITGYILYYTLDKNIPIDDWVMEAISGDRLTHQVVDLNLDTVYYF
RIQAKNAKGVGPLSEPVQFRTAKVELPDKMANDQGRGEHAFWPSDTNPIDRSSINESPIG
QMRPPHGSVTPQRNSYLLVIILVSVGAISMVVVTALVCIHRSSSQQRKKRASHGAGKRKG
SQKELRPPDLWIHHEEMEMKNLEKASSIAPSGRDSPLQACQDRPQVAHSQSESQMGSKSS
HSGADADEASSGISTLDRSVTARRGTRAKMMIPMDLQPSNTPVVSAIPVPTLESSQYPGI
LPSPSCGFTHNKFSLRPMPFPSLTVDRGYTPAMPSDSSAAPLLQQQAPPPPAAPLLPGSA
APTSDPVPPVGPVPGAPAASGPSEEAQAAAGRSIPTACVRPTHPLRSFTNPLLPPPMGTI
DPKVYTSMLPQAGASLPKPQVKTASLGQAGKARSPLLPVSVPTAPDLQEEGGAKPAEDSA
TNVYEQDDLSEQMASLEGLMQQLNAITGSAF
NT seq 4596 nt   +upstreamnt  +downstreamnt
atggagctgggcgcgctgggatgtactggggatgtttggaggctgctggctcccgggatg
aggatgaggagggtctacctgctgctgctctgctggctgctgggagcgcacagctcagcc
caggcctccgacgctccatcgtcttcctcttcctcgtcgcccagccctggctttgtggcc
ttctccttcaccgtggagccccaggacacggtaacggtgcggggcgggacgctgcaactg
gactgccaggcccaggcgggctcggcggcggcgggccccgcctccatcacgtggcgtaaa
gatggcgtcctgctgagcgcggtggtggacgagcggcgccggcagctggagaacggcacg
ctgacggtgcagaacgtggtgcactcccggcaccaccggcccgacgaaggggagtaccaa
tgcctcgccacgctggacgggctgggaagcatcgtcagccggacggcgaaggtcacagtg
gccggtccgttgagggtgatcgtccccaccgagtcggtctcgtcgttcctgggcgacacc
gccctgctgcgctgcgaggtctctggcgacccgaggcccgtcatccgctggcagaagaac
cgggaggacctgccgctcagtttccagcccgaatcccggctggcggttctgccgtccggg
tcgctgcaggtgagccgggtccagccgccggactcagcgacgtaccgctgcctggccgac
aacccgggcagcaccaggaccgggacggacgccgaactccgagttctcccagaacctggg
ctcagcaggaacctgcagttcctccagcgtccgtccagagtaacggccctcctgggaaca
gacgccgtgctggaatgttccgcctctggttacccgactcccagcatccagtggaggaga
ggagaggaggtgatccagagctggaacaagaagttctccctgctagcaggcagtaacctg
atcatcagaaccgtcaccgacgacgactccggcgcctacagctgcacggctgccaacaag
aaccagaacatcacggcgcaggcagaactcagcgtccaagttcctccccagttcctgaac
tacccgaccaacagctacgcctacgaggcgaccgacatcgagctggagtgcgccgtgacg
gggaacccgctgccggccgtccgctggatgaagaacggagaggaagtcattcccagcgac
tacttccagatcgtagacggaaccaacctgcagattctgggtttggtgaaatcagatgaa
ggattttatcagtgtgtcgctgaaaactcagcaggcggcgctcaggccatggcccagctg
ctgctccgagagccagaggccacacccactcagttcagccccgccctcacacctcctctt
cctccttctggctcccctttgacttactcctcctcctctgatcccccaccagtgtccccc
agcccaggcgttgccctcccctctgccccccgcgacctggtccctgtcctagtgtccagc
cggttcgtccggctcagctggcgccccccggaggagaccggaggaggcgtgcagacgtac
ggcgtctactactcccaggccggagtcgagagggagcggtcagtgaacgtgtcggagccg
gagtctctggagctgaccgtgtccaacctgaagcccgaggagagctacagcttcagggtg
gtggcgtacagcgaggcggggcccggccgcagctccgcccccctgcagatcgccaccaag
cccgacctccaggtccccagcagggtggagtctctgcgggccctggctctgtcccccacc
tccatccaggtgagctgggagccgcccagcctccctaacggacccgtcctgggctaccgg
ctgctgtggaccgagagcccgtccggaaaggagcagagcgtggaggtgagcgggattaac
tacaagatggacggactcaacaagttcaccgaatacacggtccgggttctggccgtcaac
cgctacggaccgggcaccgcctccgagacggttaccgtgacgacgcactccgacgtgccc
agcgctcctcctcagaacatcaccctggaggtcgtcctgtcccggagcatcaaggtgtca
tggcagccgccccctcgcagcgcccagaacggcatcatcaccgcatacaagatcaaatac
aggaagactggtcgccgtggagaccaggaggccatcgaacccaacaacttctggtacttg
ttcacaggtctggagaagggcagtcagtacagcttccaggtggcggccatgacggtgaac
ggaacgggtccctgcagcgactggtacaccgcccagacgccggagaacgatttggacgag
agtcaggttccggaccagcccagctcgctgcacgtccggccgctgcccaacagcatcatc
atgtcctggacgccgccgctcagccccaacatcctggtccgcggttacatcattggctac
ggcgtgggaagcccctacgccgagacggtccgagtggacagcaagcagagatactactcc
atcgagaacctggagccgagctctcactacgtcatctcactgaaggccttcaacaacgcc
ggggagggagttcctctgtacgagagcgccgtgaccagatcactgacagaccccattgac
ccgttagaggacgaccttttccacctctttgataaattcccaactcccatgccagacacc
agcactcccatgatccccccagtaggagtccaggccgtagcgctgtcctcggactcggtc
cgcgtctcctgggccgacaactccatgaccaagaaccagaagtcgtcggaggtccggtac
tactccgtcaagtggaagtccagcgtctcgaccagcgggaagtacaagtctgcagacacc
acggctctcagccacaccgtcaccggactcaaacccaacaccatgtacgagttcgccgtc
atggtaaccaaaggtcggaggtccagcacctggagtatgacggcccacgccacgacgtat
gaagcagctccaagctccgcccccaaagatctgacggtcatcagtcgggaaggacgccct
cgtgccgttctcatcagctggcagccgccgatggaagctaacggacggatcacaggctac
atcctgtactacaccctggataagaacatccccatcgacgactgggtgatggaggccatc
agcggcgaccggctgacccaccaggtcgtggatctgaacctcgacaccgtttactacttc
aggattcaggccaaaaacgccaaaggagtgggacctctgtcggagccggtgcagttcagg
acggctaaagtggagcttccagacaagatggccaacgatcaaggtcggggagaacacgcc
ttctggccgtccgacaccaacccgatcgacaggagcagcatcaacgagtctcccattggt
cagatgcgtccgccgcacggcagcgtcacgcctcagaggaacagctacctgctggtcatc
atcctggtttccgtgggcgccatcagcatggtcgtcgtcacggcgctcgtctgcatccac
cgctcgtcctcccagcagaggaagaagcgggccagccacggcgccgggaagcgtaagggc
agccagaaggagctgcggccgccggacctgtggatccaccatgaggagatggagatgaag
aacctggagaaggcgtccagcatcgccccgtccggacgcgactcgccgctccaggcctgc
caggaccgcccccaggtggcccacagccaatcagagagccagatgggcagcaagagcagc
cactcaggagccgacgccgacgaggcgtccagcggcatctccactctggaccgatccgtc
accgccaggaggggaaccagggccaagatgatgatccccatggacctgcagcccagcaac
acgcctgtggtcagcgccatcccggttcctacgctggaatcctctcagtatccggggatt
ctgccttcaccgtcctgcggcttcacacacaacaagttcagcctcaggcccatgccgttc
cccagcctgacggtggacagaggatacacaccagcgatgccgtcggactcctccgccgcc
cccctgctgcagcagcaggctccgccccctccggccgccccgctgctgcccggttccgcc
gctcccacctccgacccggtccccccggtggggcccgtgcccggggcccccgccgcctcg
ggcccctcggaggaggcccaggcggcggccgggcgcagcatccccacagcctgcgtccgg
cccacgcaccccctgcgcagcttcaccaacccgctgctgccgccgccgatggggaccatc
gaccccaaggtctacacctccatgctgccgcaggccggtgccagcctgccgaagccccag
gtgaagacggcgtctctgggtcaggccgggaaggcccgctcccctctgctgcccgtctcg
gtaccgacggcgccggacctgcaggaggaaggcggagccaagccggcagaagattcagcc
accaacgtgtacgagcaggacgacctgtcggagcagatggccagtctggaaggactgatg
cagcaactcaacgccatcactggctccgccttctaa

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