Xiphophorus hellerii (green swordtail): 116724857
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Entry
116724857 CDS
T07363
Symbol
dcc
Name
(RefSeq) netrin receptor DCC isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
xhe
Xiphophorus hellerii (green swordtail)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
V-set
C2-set_2
Interfer-bind
Ig_5
CRLF2-like_D2
Ig_4
Tissue_fac
Sp38
V-set_CD47
Arylsulfotran_N
Herpes_UL74
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
116724857
NCBI-ProteinID:
XP_032426513
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All DBs
Position
8:1089420..1246036
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AA seq
1531 aa
AA seq
DB search
MELGALGCTGDVWRLLAPGMRMRRVYLLLLCWLLGAHSSAQASDAPSSSSSSSPSPGFVA
FSFTVEPQDTVTVRGGTLQLDCQAQAGSAAAGPASITWRKDGVLLSAVVDERRRQLENGT
LTVQNVVHSRHHRPDEGEYQCLATLDGLGSIVSRTAKVTVAGPLRVIVPTESVSSFLGDT
ALLRCEVSGDPRPVIRWQKNREDLPLSFQPESRLAVLPSGSLQVSRVQPPDSATYRCLAD
NPGSTRTGTDAELRVLPEPGLSRNLQFLQRPSRVTALLGTDAVLECSASGYPTPSIQWRR
GEEVIQSWNKKFSLLAGSNLIIRTVTDDDSGAYSCTAANKNQNITAQAELSVQVPPQFLN
YPTNSYAYEATDIELECAVTGNPLPAVRWMKNGEEVIPSDYFQIVDGTNLQILGLVKSDE
GFYQCVAENSAGGAQAMAQLLLREPEATPTQFSPALTPPLPPSGSPLTYSSSSDPPPVSP
SPGVALPSAPRDLVPVLVSSRFVRLSWRPPEETGGGVQTYGVYYSQAGVERERSVNVSEP
ESLELTVSNLKPEESYSFRVVAYSEAGPGRSSAPLQIATKPDLQVPSRVESLRALALSPT
SIQVSWEPPSLPNGPVLGYRLLWTESPSGKEQSVEVSGINYKMDGLNKFTEYTVRVLAVN
RYGPGTASETVTVTTHSDVPSAPPQNITLEVVLSRSIKVSWQPPPRSAQNGIITAYKIKY
RKTGRRGDQEAIEPNNFWYLFTGLEKGSQYSFQVAAMTVNGTGPCSDWYTAQTPENDLDE
SQVPDQPSSLHVRPLPNSIIMSWTPPLSPNILVRGYIIGYGVGSPYAETVRVDSKQRYYS
IENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSLTDPIDPLEDDLFHLFDKFPTPMPDT
STPMIPPVGVQAVALSSDSVRVSWADNSMTKNQKSSEVRYYSVKWKSSVSTSGKYKSADT
TALSHTVTGLKPNTMYEFAVMVTKGRRSSTWSMTAHATTYEAAPSSAPKDLTVISREGRP
RAVLISWQPPMEANGRITGYILYYTLDKNIPIDDWVMEAISGDRLTHQVVDLNLDTVYYF
RIQAKNAKGVGPLSEPVQFRTAKVELPDKMANDQGRGEHAFWPSDTNPIDRSSINESPIG
QMRPPHGSVTPQRNSYLLVIILVSVGAISMVVVTALVCIHRSSSQQRKKRASHGAGKRKG
SQKELRPPDLWIHHEEMEMKNLEKASSIAPSGRDSPLQACQDRPQVAHSQSESQMGSKSS
HSGADADEASSGISTLDRSVTARRGTRAKMMIPMDLQPSNTPVVSAIPVPTLESSQYPGI
LPSPSCGFTHNKFSLRPMPFPSLTVDRGYTPAMPSDSSAAPLLQQQAPPPPAAPLLPGSA
APTSDPVPPVGPVPGAPAASGPSEEAQAAAGRSIPTACVRPTHPLRSFTNPLLPPPMGTI
DPKVYTSMLPQAGASLPKPQVKTASLGQAGKARSPLLPVSVPTAPDLQEEGGAKPAEDSA
TNVYEQDDLSEQMASLEGLMQQLNAITGSAF
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggagctgggcgcgctgggatgtactggggatgtttggaggctgctggctcccgggatg
aggatgaggagggtctacctgctgctgctctgctggctgctgggagcgcacagctcagcc
caggcctccgacgctccatcgtcttcctcttcctcgtcgcccagccctggctttgtggcc
ttctccttcaccgtggagccccaggacacggtaacggtgcggggcgggacgctgcaactg
gactgccaggcccaggcgggctcggcggcggcgggccccgcctccatcacgtggcgtaaa
gatggcgtcctgctgagcgcggtggtggacgagcggcgccggcagctggagaacggcacg
ctgacggtgcagaacgtggtgcactcccggcaccaccggcccgacgaaggggagtaccaa
tgcctcgccacgctggacgggctgggaagcatcgtcagccggacggcgaaggtcacagtg
gccggtccgttgagggtgatcgtccccaccgagtcggtctcgtcgttcctgggcgacacc
gccctgctgcgctgcgaggtctctggcgacccgaggcccgtcatccgctggcagaagaac
cgggaggacctgccgctcagtttccagcccgaatcccggctggcggttctgccgtccggg
tcgctgcaggtgagccgggtccagccgccggactcagcgacgtaccgctgcctggccgac
aacccgggcagcaccaggaccgggacggacgccgaactccgagttctcccagaacctggg
ctcagcaggaacctgcagttcctccagcgtccgtccagagtaacggccctcctgggaaca
gacgccgtgctggaatgttccgcctctggttacccgactcccagcatccagtggaggaga
ggagaggaggtgatccagagctggaacaagaagttctccctgctagcaggcagtaacctg
atcatcagaaccgtcaccgacgacgactccggcgcctacagctgcacggctgccaacaag
aaccagaacatcacggcgcaggcagaactcagcgtccaagttcctccccagttcctgaac
tacccgaccaacagctacgcctacgaggcgaccgacatcgagctggagtgcgccgtgacg
gggaacccgctgccggccgtccgctggatgaagaacggagaggaagtcattcccagcgac
tacttccagatcgtagacggaaccaacctgcagattctgggtttggtgaaatcagatgaa
ggattttatcagtgtgtcgctgaaaactcagcaggcggcgctcaggccatggcccagctg
ctgctccgagagccagaggccacacccactcagttcagccccgccctcacacctcctctt
cctccttctggctcccctttgacttactcctcctcctctgatcccccaccagtgtccccc
agcccaggcgttgccctcccctctgccccccgcgacctggtccctgtcctagtgtccagc
cggttcgtccggctcagctggcgccccccggaggagaccggaggaggcgtgcagacgtac
ggcgtctactactcccaggccggagtcgagagggagcggtcagtgaacgtgtcggagccg
gagtctctggagctgaccgtgtccaacctgaagcccgaggagagctacagcttcagggtg
gtggcgtacagcgaggcggggcccggccgcagctccgcccccctgcagatcgccaccaag
cccgacctccaggtccccagcagggtggagtctctgcgggccctggctctgtcccccacc
tccatccaggtgagctgggagccgcccagcctccctaacggacccgtcctgggctaccgg
ctgctgtggaccgagagcccgtccggaaaggagcagagcgtggaggtgagcgggattaac
tacaagatggacggactcaacaagttcaccgaatacacggtccgggttctggccgtcaac
cgctacggaccgggcaccgcctccgagacggttaccgtgacgacgcactccgacgtgccc
agcgctcctcctcagaacatcaccctggaggtcgtcctgtcccggagcatcaaggtgtca
tggcagccgccccctcgcagcgcccagaacggcatcatcaccgcatacaagatcaaatac
aggaagactggtcgccgtggagaccaggaggccatcgaacccaacaacttctggtacttg
ttcacaggtctggagaagggcagtcagtacagcttccaggtggcggccatgacggtgaac
ggaacgggtccctgcagcgactggtacaccgcccagacgccggagaacgatttggacgag
agtcaggttccggaccagcccagctcgctgcacgtccggccgctgcccaacagcatcatc
atgtcctggacgccgccgctcagccccaacatcctggtccgcggttacatcattggctac
ggcgtgggaagcccctacgccgagacggtccgagtggacagcaagcagagatactactcc
atcgagaacctggagccgagctctcactacgtcatctcactgaaggccttcaacaacgcc
ggggagggagttcctctgtacgagagcgccgtgaccagatcactgacagaccccattgac
ccgttagaggacgaccttttccacctctttgataaattcccaactcccatgccagacacc
agcactcccatgatccccccagtaggagtccaggccgtagcgctgtcctcggactcggtc
cgcgtctcctgggccgacaactccatgaccaagaaccagaagtcgtcggaggtccggtac
tactccgtcaagtggaagtccagcgtctcgaccagcgggaagtacaagtctgcagacacc
acggctctcagccacaccgtcaccggactcaaacccaacaccatgtacgagttcgccgtc
atggtaaccaaaggtcggaggtccagcacctggagtatgacggcccacgccacgacgtat
gaagcagctccaagctccgcccccaaagatctgacggtcatcagtcgggaaggacgccct
cgtgccgttctcatcagctggcagccgccgatggaagctaacggacggatcacaggctac
atcctgtactacaccctggataagaacatccccatcgacgactgggtgatggaggccatc
agcggcgaccggctgacccaccaggtcgtggatctgaacctcgacaccgtttactacttc
aggattcaggccaaaaacgccaaaggagtgggacctctgtcggagccggtgcagttcagg
acggctaaagtggagcttccagacaagatggccaacgatcaaggtcggggagaacacgcc
ttctggccgtccgacaccaacccgatcgacaggagcagcatcaacgagtctcccattggt
cagatgcgtccgccgcacggcagcgtcacgcctcagaggaacagctacctgctggtcatc
atcctggtttccgtgggcgccatcagcatggtcgtcgtcacggcgctcgtctgcatccac
cgctcgtcctcccagcagaggaagaagcgggccagccacggcgccgggaagcgtaagggc
agccagaaggagctgcggccgccggacctgtggatccaccatgaggagatggagatgaag
aacctggagaaggcgtccagcatcgccccgtccggacgcgactcgccgctccaggcctgc
caggaccgcccccaggtggcccacagccaatcagagagccagatgggcagcaagagcagc
cactcaggagccgacgccgacgaggcgtccagcggcatctccactctggaccgatccgtc
accgccaggaggggaaccagggccaagatgatgatccccatggacctgcagcccagcaac
acgcctgtggtcagcgccatcccggttcctacgctggaatcctctcagtatccggggatt
ctgccttcaccgtcctgcggcttcacacacaacaagttcagcctcaggcccatgccgttc
cccagcctgacggtggacagaggatacacaccagcgatgccgtcggactcctccgccgcc
cccctgctgcagcagcaggctccgccccctccggccgccccgctgctgcccggttccgcc
gctcccacctccgacccggtccccccggtggggcccgtgcccggggcccccgccgcctcg
ggcccctcggaggaggcccaggcggcggccgggcgcagcatccccacagcctgcgtccgg
cccacgcaccccctgcgcagcttcaccaacccgctgctgccgccgccgatggggaccatc
gaccccaaggtctacacctccatgctgccgcaggccggtgccagcctgccgaagccccag
gtgaagacggcgtctctgggtcaggccgggaaggcccgctcccctctgctgcccgtctcg
gtaccgacggcgccggacctgcaggaggaaggcggagccaagccggcagaagattcagcc
accaacgtgtacgagcaggacgacctgtcggagcagatggccagtctggaaggactgatg
cagcaactcaacgccatcactggctccgccttctaa
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