Xiphophorus hellerii (green swordtail): 116728580
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Entry
116728580 CDS
T07363
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116728580
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116728580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116728580
Spliceosome [BR:
xhe03041
]
Common components
Common spliceosomal components
SR proteins
116728580
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116728580
NCBI-ProteinID:
XP_032432693
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All DBs
Position
11:10316887..10321003
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AA seq
249 aa
AA seq
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MSGGFARGPSGSNDCRIYVGNLPPDIRSKDVEDLFYKYGSVRDIDLKNRRGGPPFAFVQF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGMGPSRNRYGPPSR
RSENRVVVSGLPQSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDN
TKFRSHEGETAYIRVKMDGNRSPSYGPSRSRSRSRSRSKSRSRSYSPRRSRGSPQYSPRR
SRSRSRSRT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggattcgctcgaggaccctcgggaagcaacgattgtcggatatatgtgggg
aatcttcccccagacatccgctccaaagacgtcgaagacttattttataaatatggatct
gtgcgtgatattgacctgaagaaccgcagaggaggaccgccgtttgctttcgttcagttc
gaggaccccagggacgctgaggatgctgtgtatgggcgagatggttatgattacgatggc
tatcgactgcgtgtggagtttcctagaagtggaaggggtggtggcggaggaggaggagga
ggaggtggtggaggcggaggcatggggccgtcaaggaatcggtacggccctccatcccga
cgctccgaaaacagagtggttgtgtcaggtcttccccaaagcgggagctggcaggacctg
aaggatcacatgcgggaggcaggtgatgtatgttacgctgatgtcttccgcgatggcaca
ggtgtggtggagtttgtgcgcaaagaagacatgacctacgctgtgcgtaaattggataac
accaagtttcgttctcatgagggagagacggcctacattcgtgtgaagatggatggcaat
cgcagccccagctacggcccctctcgctctcgtagccgcagcagaagccgcagcaagagc
cgatcccgcagctactccccgcgccgcagccggggatccccccagtactcgccccggcgt
tctcgttcacgctcccgttcccgcacttaa
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