Xiphophorus hellerii (green swordtail): 116728718 Help Entry 116728718         CDS       T07363                                  Symbol rad50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe03440   Homologous recombination xhe03450   Non-homologous end-joining xhe04218   Cellular senescence Brite KEGG Orthology (KO) [BR:xhe00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     116728718 (rad50)    03450 Non-homologous end-joining     116728718 (rad50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     116728718 (rad50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:xhe03032]     116728718 (rad50)    03400 DNA repair and recombination proteins [BR:xhe03400]     116728718 (rad50) DNA replication proteins [BR:xhe03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     116728718 (rad50) DNA repair and recombination proteins [BR:xhe03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      116728718 (rad50)     BRCA1-C complex      116728718 (rad50)    NHEJ (non-homologous end-joining)     MRX complex      116728718 (rad50) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_23 Rad50_zn_hook AAA_21 SbcC_Walker_B SMC_N ABC_tran AAA_15 zf-met AAA_29 AAA_13 AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  116728718 NCBI-ProteinID:  XP_032432891 LinkDB All DBs Position 11:25713590..25738845 Genome browser AA seq 1312 aa AA seqDB search MSKIDKMSILGVRSFGIEDKDKQIISFFTPLTVLVGPNGAGKTTIIECLKYATSGELPPG SKGGAFVHDPKDAHETDVRAQIRLLFSDVNGEKVTIQRSMSCTQKAKNYSFKSLEQVITR IKDGEKVSLSSKCGELDREMISALGVSKPVLNHVIFCHQEDSNWPLSEGKALKDKFDSIF AATKYIKALETMRQLRLKQSQTVKECQVELRYLKQNKEKAQQLRETVATKEAQLMASKDS VQQTESHIEPLENRLMEFDQKLGKVMKLDNDIKALDSRKKQMEEDNKELEETMEQVFQGS DEELQDIYQNHQRTVKEKERRLTDCQKELERAGWECQRLNRVKADLLVEQGRLQLEADRH TQNVKSRDTLVRSLSSHLEMEGYDRPPFTSLQLESFHRHVTQRLEQEKETLSQIIAGLQE KEQQKQQSIDEIRDKKTGLERTVELKRDMQGKKQQELRNIRADLQKLEGSSNRLQELENE LAKNERELERAVQSSNVEELKTEIEELQREKTELDRAQRRLDQEMQILNTHTTARTQMDM LKKDKTEKEEQVRKTKARHGEDLMLLLGHFPNKRELEDWIYSKSKEINSTRDKLAKLNKD LASSEQNKSHIAAELRKKEQQLSSDEEKFFSVCGSQDLEQDLGRLQEDLEKVSKQRAMLA GATAVYTQFISQLTEEREPCCPVCQRTFPSESDLQEVISDMQSKLRLVPDKLKNTEQDLK RKERKKDEMMALKPVRQAIVQSQEKELPELRNRLQTVNREIERLKAEVEEQETLLGTLMS EEETAKACLQDISLMDRYLMDLKELDRKIAQQAAKLQGVDLTRNIQQVSQEKQETQHKLD TTSSKMELKRKLIQDQQDQIQILKSTVNETRAEKLQLSSDMQKQQQLEEQCIDFTAEIQA LTRDIREAKEQLSPLSAALEKLQQEKQELMEHKRKKQEEGQEKINGIKERVKSVSSLERD IKKYMDDGREEYKEQKESELQETNTQLHEAEKQKEKINKEMGNIRQDIDTQKVQERWLQD NLTLRKRVEELKEVVAKRETLMKEMGNMQVLQLRQERRDAERKLEELKKNRSIALGRQKG FEEEILHYRKELREDQYDKAEECYKNKMITMRTTELVIKDLDLYYKALDQTIMRFHSMKM DEINKIIRDLWRSTYRGQDIEYVEIRSDVDENSSAGVKRRVYNYRVVMVKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSRQR NFQLLIITHDEDFVELLGRSSYIENFYRIRKNQDQNSEINKCSISSLSSYLH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcaaagatagacaaaatgagcatcctcggagtgaggagctttgggattgaggataaa gacaaacaaatcatttctttttttactcctttgactgttctggtgggacccaacggagca gggaaaacgactattattgaatgcctcaagtatgcaacatcgggggaacttccccctgga tctaaaggaggagcttttgttcatgatccaaaggatgcccatgagacggacgtacgagct cagattcgactcttgttctcagatgtgaatggagagaaagtcaccatccagcgctccatg tcctgcacacagaaagcaaagaactattcattcaaaagcttagagcaggtcattactaga ataaaagatggtgaaaaagtaagcctttcttctaagtgtggtgagctggatcgggagatg atttctgctttaggagtatccaagccggtgctgaatcatgtcatcttttgtcaccaagaa gattccaactggccacttagtgagggcaaagcactcaaagacaaatttgactccatcttt gctgcaaccaaatatattaaggcactggagacaatgcgtcagctgcgtctcaaacagagt cagacagtcaaagaatgccaagtggagttacgctacctgaagcaaaacaaggagaaggct cagcagctcagagagactgtggccaccaaggaggctcaactgatggcctccaaagacagt gtccaacagacggagagccatattgagccgcttgagaatcgactgatggagttcgaccag aaactggggaaggtaatgaagttggacaatgacattaaggctttggacagcaggaagaaa cagatggaggaggacaacaaagagctggaggaaaccatggaacaggtgtttcagggttca gatgaggagctacaagacatttaccagaaccaccagaggacagtgaaggagaaggagcgc aggttgacagactgccagaaagagctggagagagccggttgggaatgtcagagactcaac agagtgaaggccgatctcttagtcgagcaaggtcgtcttcagctggaagctgatcgccat actcagaatgtcaagagccgtgacactctggttcgctctttgtcatcccatctggagatg gagggttacgaccgcccccccttcacctctctgcagcttgaaagctttcatcgtcacgtc acacaaagactggagcaggagaaagagacactcagtcagattatagcaggtctgcaggaa aaggagcaacagaagcagcagtctatcgatgaaataagggataagaagactggcctggag agaaccgtagagctgaagagggacatgcagggaaagaagcagcaggaactgaggaacatc agggcagatctgcagaaactcgaagggtcatccaatcgactgcaagagctggaaaatgaa ttggccaaaaatgagcgtgagctggaacgtgccgttcagagctccaatgttgaagagctg aagactgagattgaggaactccagagagaaaagactgagcttgaccgggcgcagagacgg ctcgatcaagagatgcaaattcttaacacgcacacaactgcacgcacgcagatggacatg ttgaagaaagataaaacagagaaagaggagcaggtacggaaaaccaaggctcgtcacggc gaggatctcatgctcctcctgggtcattttcccaacaagagagaactggaagactggatc tattccaagtccaaggaaatcaatagcacaagggacaaacttgccaaattaaataaggac ttggcatcaagtgagcagaacaaaagccatattgctgctgagttgcggaagaaggaacaa caactaagcagcgatgaagagaagttcttcagcgtgtgtggcagtcaggatctggagcag gatttgggcagactgcaagaagatctggagaaagtatccaaacaaagagccatgttagca ggagccacagcagtgtacactcagttcatcagccagctgacagaggagagggagccctgc tgccctgtgtgccagcggacctttccttcagaatctgacctgcaggaagttatcagcgac atgcagtccaagctacgcctggtgcctgacaaactgaagaacacagagcaggacctgaag aggaaggagaggaagaaggatgaaatgatggcactcaaacctgtgagacaggccattgta cagtctcaggagaaggagttgcctgagctgagaaaccgacttcagactgtgaacagagaa atcgagaggctcaaggcagaagtagaagaacaggagacgctgcttggtaccttaatgtct gaggaggaaacagccaaggcctgtctacaagacatctctctgatggaccgatacttgatg gaccttaaagagctggacagaaaaattgctcagcaggcagctaaactccagggagtagac ctgactagaaacattcagcaagttagtcaggagaaacaagaaactcagcacaagctggac accacctctagcaaaatggagctgaaacgtaagctgatccaagaccaacaggaccagatt cagatcctgaaaagtaccgtaaatgaaacaagagcagagaagctgcagctaagcagcgac atgcagaaacagcagcagctggaggagcaatgtattgactttactgcagagattcaggct ttaaccagagacattagggaagcaaaggaacaactgtcacctctgtctgctgctttggaa aagctgcaacaagagaaacaagagttaatggagcataaaagaaagaaacaggaagaaggc caagagaagatcaatggcataaaagagagggtaaagtctgtctccagtttggaacgagat ataaaaaaatacatggatgatgggagagaggaatataaagagcaaaaggaatctgagctt caagaaaccaacactcagctccatgaggctgagaagcagaaagaaaagattaataaggag atgggaaacatccgtcaggacatagatacccaaaaggtccaagagcgctggttacaagac aatctgacattaaggaaacgagttgaggaactgaaggaggttgtagctaaacgagaaact cttatgaaagagatgggcaacatgcaggtgttgcagctgcgccaagaacgtcgtgatgca gaacgcaagttagaagagttgaagaagaaccggagcatcgcactcggtcggcagaaaggc tttgaagaagagattctgcattacagaaaagagttgagagaagatcagtatgacaaagct gaggagtgctacaaaaacaagatgatcaccatgaggaccacggagttggtcattaaagac cttgatctctactacaaagcccttgatcaaaccatcatgagattccacagtatgaagatg gatgagatcaataaaattattagagacctgtggcgcagcacctacaggggtcaagatatt gaatatgtggagatcaggtcggatgtggatgagaattcatcagctggagtcaagaggagg gtttacaactacagagtagttatggtgaaaggagacacagctctggatatgagaggacgc tgcagtgctggccagaaggtgttggcgtccctgatcatccgtcttgctctggcagagact ttctgtctgaactgtgggatcttggccttggatgagcccaccaccaacctggacagagag aacatcgagtccttggcacatgcccttgtagaaatcatcaagagtcgttctcgtcagcgc aatttccagctgctcatcatcacccacgatgaagactttgtagagctcctgggccgctct agctacatcgagaacttctaccgaatccgcaagaaccaggaccagaactccgaaatcaac aagtgcagcatctcctctctctcgtcttatctccattaa

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