Xiphophorus hellerii (green swordtail): 116731418
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Entry
116731418 CDS
T07363
Name
(RefSeq) cingulin-like isoform X1
KO
K06102
cingulin
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116731418
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GFIT
Motif
Pfam:
Myosin_tail_1
PI3K_P85_iSH2
DUF2452
KxDL
GDH_HM1
UPF0113_N
Motif
Other DBs
NCBI-GeneID:
116731418
NCBI-ProteinID:
XP_032437036
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All DBs
Position
13:12321498..12355007
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AA seq
1169 aa
AA seq
DB search
MGTPSTDRKAQLDYGVQIRFIKDLHDTGGVPLEKSRANSNATPPSNKYGVAVRVQGISGQ
PYVVLKDGEKGDSYGVQLSNPNPTSGPTSPYNSIPNHSKEPADFPNSSSPLVNSSRSPVS
PAEDEDGEIFGSPLRRPPGDGQAGTQGEEEGRAGRERRMERPKSEPQLKATPSETEKKIN
GTDNEEYNEAGLKPVKLKSAGPKGFNRTAAGFTGSVGRKPGSDSPPKPTPEPPPPTESEP
AAAIDTNSLAPINKLINKFNSSTPGGTLQARGRTRARQRLQFDERKRSRSLDARKDAQPE
AIPASPSSPALNPHAAPISAASSPVMSSAPATAVKATAPSAPKASFKPPEKFAAKDSPPT
IAKKPETLSRSLSQNTEVARREEAQVKQSIYNIFKDGSSSETEASFKRKSSLVFETPDRL
QKEGADRSIRKEKLEDLHKQLERYKKELEQAQDELAAERMAREVAESRLRLHEDQLAHLQ
EELRRVLENLPQSDSFQSDVTNLQARLAEATMLYQRQEEVLHQRERELTALKGALKEEVE
CHDKEMEALREQFSQDVKNLRKNMEDFTQSQEQIEEEREKVNASLLTLEEELESSREQGE
QWRTELEAATQKLQSTREELKKSRLEKEKVEGSLKDLQNKKPASDDANALKEELRRCHDD
LKRTRADLERQKGEAEEKAGALEAVKKASGETEAELLSEIRKLKEQFLEDKAELEKALET
AKESSIASAGKSVVDGGTNQELQQENTRLKDRLARMQSRLQSSVPRSSDAEEELEALEDE
NRSLKSQLEEAKRGATRLSKERDDLTRRLEERDLEREALRRGKSDLEEQKRLLDRSLEKI
NKEMELMMGDSRQSVATLQTQLDEFRERSRKDLLEAQRNSKDRLAELQRAQNNLKAQQEE
VSRLKKELLTCSEERDGAQLERDLLNNRLKHLENELESERSSHSDRGREIRGLEDKIKTL
EIELDEEKSGVELLNDRITRSRDQVDQLRSELMQERSERHDLEMDKSALERQVKELKSRL
ADMEGQSRPTAGITLLENKIQELEERLRSEEREKTSIQASQRRAERKLKELNATLDQERS
QHIEQRDQLTLRVKALKRQLDESEGEVERLEGVRRKVLRDLEEQQELQEALQAKVAALEN
DLKRKSQQTHRTALTSSVLSSDEEDGPPS
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggaactccttccactgaccggaaggcgcagttggattacggcgttcagatccgcttc
atcaaagacctccatgacacaggcggggtcccactcgaaaaatccagagcaaacagcaac
gccacgcctccttccaacaaatatggagtggctgtgagggtccaggggatctctgggcag
ccgtatgtcgttctgaaagatggggagaaaggtgactcttatggagtccagctgtctaat
cccaatcccacttccgggccaacatctccgtacaacagcatcccaaaccatagcaaagaa
ccggcagatttccccaactcctccagtcctcttgtaaactcttcccgctccccagtgtct
ccggcagaggatgaggatggggagatatttgggagccccctgaggagacctccaggggat
ggccaggctgggactcagggggaggaggagggaagagctggcagggagcgtcggatggag
aggccaaaatctgaaccccaactcaaagctacacccagcgaaacggagaagaaaattaac
gggactgataacgaggagtataacgaagcaggactgaagcctgttaagctaaaatctgcg
ggacccaaagggttcaaccgaactgctgctggatttaccggttctgtggggagaaaaccc
ggctcagattcacccccaaagccaaccccagagcctccaccgccgactgagagcgagccc
gccgcagccatcgacaccaactccctggcgcccatcaacaaactcatcaacaagttcaac
agcagcacgccgggcggcaccctgcaggcgaggggccgcaccagagccaggcagcggctc
cagttcgacgagcgcaagaggtccagaagtctcgacgcccggaaagatgcacagccagag
gccatccctgcctctccttcatctcccgctctgaaccctcatgctgcgccaatatctgcc
gcttctagtccagtgatgtcatctgctccagcaaccgctgtcaaggcgacggcgcccagc
gcccccaaggcgagcttcaagccaccagagaagtttgctgctaaagatagtcctccaact
attgcaaaaaaacctgagacgctttcaagaagtctgagtcaaaacacagaggttgctaga
agagaagaggctcaagtcaaacagtctatttacaacatcttcaaagacggcagctccagt
gagaccgaagcttcgtttaaaaggaaatccagcctcgtcttcgagactccagacagattg
cagaaggaaggagccgacagaagcatcagaaaggagaaacttgaggatcttcacaagcaa
ctcgaacgttacaagaaggaactggagcaggcgcaagatgaacttgctgcagagcgaatg
gccagagaggtggcagagtctcgtctgcgccttcatgaagatcagctggctcatcttcag
gaagagctgaggcgggttttggagaatctgccccagtcggactcattccagtcggatgtg
acgaacctgcaggcccggttggccgaagccaccatgttgtaccagcggcaggaggaggtg
ctccaccagcgagagcgagaactgacggcgctgaagggggcgctgaaggaggaggtggag
tgccatgacaaagagatggaggctctgagggagcagttcagccaggacgtgaagaacctc
cgaaaaaacatggaggacttcacacagtcgcaggagcagatcgaggaggagcgggagaag
gtgaatgcctccctgttgacactggaggaggagctggagagcagcagggagcagggggag
cagtggaggacggagctggaggccgccacgcagaaactgcaaagcaccagagaggaacta
aaaaagtctcgtttggaaaaggaaaaggttgagggctccctgaaggatcttcagaacaaa
aagcctgcgtctgacgatgcaaacgctttaaaagaggagctccggcgttgccatgacgac
ctgaagcgtacccgcgccgatctggagagacaaaagggcgaggcggaggagaaagccggg
gcactcgaagccgtgaagaaggcgagcggagagacggaggccgagcttctgtcggagatt
cgcaagctgaaggagcaatttctggaagacaaggccgagctggaaaaggccctcgagacg
gcgaaggagtcatctattgcatcagcagggaagtctgtggtggacggcggcaccaatcag
gagctgcagcaggaaaacactcgcctcaaagacaggctggcccgcatgcaatcaaggctt
cagtccagtgtgccgcgcagctcggatgctgaggaggagctggaagccctggaagacgag
aaccgctccctgaagtctcagctggaggaggccaagagaggcgccacccggctgagcaaa
gagcgggacgacctcacccggcggctggaggaacgagacctggagagggaggcgctacga
cggggcaaaagcgacctggaggagcagaaacggctgctggaccgatctcttgagaagatt
aacaaggagatggagttgatgatgggagattctcgtcagtcggtggccactctgcagacg
cagctggatgaattcagggagcgatcgaggaaagacctgctggaggcgcagcgaaacagc
aaagaccggctggctgagcttcaaagggctcagaataacctgaaggcccagcaggaagag
gtttctcgtcttaagaaggagctgctgacctgcagcgaggagagagacggtgctcagctg
gagagggatctcctgaacaaccggctgaaacacttggagaatgagctggaatctgagagg
agctcccactcggaccgaggccgggagatccggggcctggaggataaaatcaagacgctg
gagatcgagctggatgaggagaagagtggtgtggagctgctgaacgatcgcataaccagg
agcagagatcaggtggaccagcttcgctcggagctgatgcaggagcgctcagagagacat
gacctggagatggacaagagcgccctggaaagacaggtaaaggagctcaagtcccgcctg
gctgacatggagggacagagccgacccacagctggaatcacgctgctggagaacaagatc
caggagctggaggaaagactccgcagtgaagaacgggagaagacgagcatccaggcatcc
cagagacgagcagagagaaaactgaaggagctgaacgccacattggaccaggagagaagc
cagcatattgagcagagggatcagctgaccctccgtgttaaggccctgaagcgtcagctg
gatgagagcgagggagaggtggagcgcttggagggagtccgccgtaaagtcctcagagac
ctggaggagcagcaggagctccaggaggctctccaggccaaagtcgcagcgctggagaac
gatctgaagcgaaagtcgcagcagactcatcgcacggctctgacatcatccgtgttgagc
tctgacgaggaggacggccctccatcttga
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