Xiphophorus hellerii (green swordtail): 116733707
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Entry
116733707 CDS
T07363
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116733707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116733707
03021 Transcription machinery [BR:
xhe03021
]
116733707
03036 Chromosome and associated proteins [BR:
xhe03036
]
116733707
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Helix-turn-helix
ARID
116733707
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116733707
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116733707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116733707
NCBI-ProteinID:
XP_032440405
LinkDB
All DBs
Position
15:4757976..4780775
Genome browser
AA seq
1894 aa
AA seq
DB search
MDASLGSDSNSSNNNPPPTGTSSQFNHYYGNGRGGPCFDQHGGQQSPGTGVTAAAHTVHG
TMDQVHNSHEGYSNNSPYNHYPNYRAGYGSGGYGGMMSPSRQGNSLMGPAAANPAKAAMV
AASSPAGGGGGGFQRFPGQGQQHPSGATPTLNQLLTSPSPMMRGYGGGYSDYSNPAVQQH
QSGVGPAEDTGSQYGSAAAHGWVGQQRSHPGHNGPSSGRSQVAPMDPMAMKRSQLYGMSN
SPYSQQQGAPYPGQPYSSPSPHRYPMGMSGRGQMAMGGMQYPQQQMSSQYGQQQQQNLSF
SQPGQSPYFSPSQQQPAAPSQPSYLQPCPLPPQEVPQEAYGGRGKSAAMTPGKSNQEDLS
QQERPSSLPDLSRSIDDLLTGTEAAVSSGASGSGSAQGDQGTPGARSPFSPHVSPRLPPL
ARTGPSPSPSLSPAGSRSGPLSPTSSSGPGPQVSGSDVGPHSSQSAMTPDRGFPPSMQRS
NQGPHFGPLSPHPASAGPGLHGSYQQGSYGPPGTYPRPPHYGGTPAAGYSGPGSGPSLAN
SMGLNTAGPMHGQGPSTPSGRGPGPGAGGRPYTTGPGTAAPTSPNMPQAAGQGMGPPGAT
ASCKPPDMGINSGPNANASLIAHSRQGSYSAMAAMRVSGGSGGSGAPFSSSGRMTPQGPP
YTAPGLGMMASDGTGSHDLKQRVELRDAVGSAADPTKMKQDSYSSQCVVPPPGAACPMSP
SPASVLSCVGEDSDSVGSPPWIRTPSSPQKPNVATMTNEKITKLYEMGSEPDRRLWVDRY
LSFMEDRETPVANLPAVGRKPLDLCRLYMAVRAIGGLAMVNKNKKWRELSSLLSVGTSSS
SASSLKKQYIQYLFAYECKMERGEEPPLDAGAGDAKKPLQVKGQPPSPANSGSFQGPNTP
LSSSSSLTDAPVDPKPPTRSSTPHNQMAPQPGNRTMGGVSVQDPFSEGSDPAFHSKRGPG
PCGGPYQQGAGPTEPAMRMQYDGSTDPYGAPRKGPVPGEAFGQSQMPGGAMQDMFPRGPS
SGPLSGMGPRPQYPYSPGYDRRLDRVMGPEGSMAPPGGQNSMGPSANEASMYPPNRYPQQ
RHGNDGFGQQYPHSMAFGSHQPLYPQQQGYKRPMEAMFPAAKRHEGEAFGVQQYGSQQSD
PFGPYGPGPGGFSGPEHRPVAGQYQYPYGRDRQGLPQHGMMGSAPAAAADGGPQPSLWPP
RTEMGFSYSRQGQGPPFPDQEGRPPPDAQWPPSNLNQCQPPFPSHSSSSSSSSMPPLPSR
QPPSSFQATPTIPNHVTRPQSPSSFPRPPVGSLSPNGAPYLPVKKPGVPTVPPANQGLPL
VYREVVFPPSSVEATPPKLKPRRRLTAKDTGTPEAWRVMMSLKSGLLAESTWALDTINIL
LYDDGTVGSFSLTLLPGFLELIVEFYRRCLIQMFGILQEYEIGAEGPKATPKDPGEAPSP
LNKEDAKPEDSPQQSSKYDKWPVRVEEAGESWAEVERRADPTRPNGFISGLLHWKAGGGD
STAHIQTHFEPRSRDFRPPDPEQEKQSGGVEEQQTEEEEQKQTGHQGGFPSEVRGQRPAP
AEAQNPISLQEDEPRCWDEAPLSTAESWQDSLARRCICVSNIIRSLSFIPGNDAVLSRHP
GLVLILGRLVLLHHSHPHRKRAPPTYQREEEAGRACSRDEWWWDCLAALRENTLVTLANV
SGQLDLSQYPEDIVLPVLDGLLHWMVCPSAEAQDPFSGASGTAALSPQRLVLECLCKLSV
QDCNVDLLLATPPFSRQRQLFATLVRLVGERRSQVCREMAVAVLSNLARGDATAARAVAL
QKGSVGTLIGFLEDSLAVAQYQQNPHAAAPPPEPPSINMMCRAAKALLAVASVEENRPEF
VLYESRLLDISLSSALNSAVAAIMCEVLFKLSRS
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atggatgccagcctgggatcagacagcaacagcagcaacaacaaccctcctccgactggg
accagctcccagtttaatcattattatgggaatggaagaggagggccttgctttgatcaa
catggcggacaacaaagcccagggactggggtaacagcggcggcacacacggtacacggc
accatggaccaggtccacaactcccacgaaggctacagcaacaacagcccgtacaaccac
tatccgaactaccgagcgggctacgggagcggtggctacgggggcatgatgagcccctca
cggcaggggaacagcctgatgggcccggccgccgctaacccagccaaagcggctatggtg
gccgccagttctccggctggaggaggcggaggaggattccagcggtttcccggacagggt
cagcagcacccttcgggggctacgccgactttgaaccagttgttaacgtctccgagcccg
atgatgcgcggctacggaggcggatattcagattacagtaatcccgctgtacagcagcac
cagtcgggtgtggggccggcggaagacacgggctctcagtacggatcagcagcagcgcat
ggttgggtgggacaacagaggagtcacccgggtcacaacggaccgagcagcggcagatct
caggtggcgccgatggacccgatggcgatgaaacgctctcagctttacgggatgagcaac
agcccgtactcccagcagcagggggcgccgtaccctggacaaccctacagctccccatcg
ccccacagatacccaatgggaatgtctggcagggggcagatggcaatgggagggatgcag
taccctcagcagcagatgagctcccagtatggccagcagcagcaacagaacctgagcttc
agccagccgggccagtcaccgtacttcagcccctcccagcagcagccggccgcccccagc
cagccgtcgtacctgcagccctgccccctgccgccccaggaagttcctcaggaggcgtat
ggggggcggggcaaatctgcagcaatgactcctgggaaatcgaaccaggaggacttgagc
cagcaggagcggccgtccagtctgccggatctctcccgctccatcgatgacctcctgacc
ggcaccgaggcggcggtgagttcaggggcctccggttccggcagcgctcagggcgaccag
gggaccccgggggcccgctctcctttctccccccacgtttcgccacgtctcccccctctg
gcccgaacgggtccctctccgtccccgtcgttgtcccctgccgggtcccgctcggggccc
ctgtcccccaccagcagcagcggtccaggcccccaggtgtctggatcagacgtcggcccc
cactcctcccagtcggccatgactccagaccgaggtttccctccctctatgcagcgtagc
aaccaggggccacattttggccccttgtctccccacccagcatcggccggccccgggctc
cacggctcctaccagcagggctcctacggccccccaggtacctaccctcggccccctcac
tacggcgggacccctgctgccggctacagcggccccggctcgggccccagcctggctaac
agcatggggctgaacactgccggccccatgcacgggcagggcccctccaccccgtcgggc
cgaggccccgggcccggagccgggggccgcccctacacgactggacccggcaccgcggcg
cccacctcccccaacatgccgcaggctgctggccagggcatggggcccccaggggccacc
gccagctgcaagccgccagacatgggcatcaactctggaccgaacgccaacgcctccctc
atcgctcacagcaggcagggcagctactcagctatggcagcgatgagagtttctggaggt
tctggaggttctggagctccgttcagcagctcaggcaggatgacccctcagggcccgcct
tacaccgctccaggattagggatgatggcgtcagacgggacaggaagtcatgacctgaag
cagcgggtcgagctccgagacgccgtcggttctgctgctgatccaaccaaaatgaagcag
gacagctacagctcgcagtgtgtggtgccgccgcccggcgccgcctgcccgatgtccccc
agcccggccagcgtgttgtcctgtgtgggagaagacagcgacagcgttggcagccccccc
tggatcaggaccccgtccagcccacagaagcccaacgtggcgaccatgaccaacgagaag
atcaccaagctgtacgagatgggcagcgagccggaccgccgcctgtgggtcgaccgctac
ctgtccttcatggaggacagggagacgcccgtcgccaacctgccggccgtcggcaggaag
ccgctggacctgtgccggctctacatggcggtgcgagcgattggcggcctggccatggtg
aacaaaaacaagaagtggcgggagctgtcgtcgctgctgagcgtcgggacgtccagcagc
tcggccagctccctgaagaagcagtacatccagtacctgttcgcctacgaatgcaagatg
gagcgaggggaggagcctccgctcgacgctggcgccggagacgctaagaagcccctgcag
gtcaagggtcaaccgccctctcctgcgaattcaggctcgtttcagggccccaacacgccc
ctgtccagcagctcctccctcaccgacgctccagttgacccgaagcccccgacccgctcg
tccaccccgcacaaccagatggcgccccagcctggaaacaggaccatgggaggcgtgagc
gtccaggacccgttctccgaaggcagcgacccggccttccacagcaaacggggcccgggg
ccctgcgggggcccctaccagcagggggcgggtccaacagaacccgcaatgagaatgcaa
tacgacggcagcacagacccgtatggagccccgaggaaaggtccggttcccggcgaggcc
ttcggtcagagccagatgcccggcggtgcgatgcaggacatgttcccccgcggaccctcc
tccggccccctgtcagggatggggcccaggccgcagtacccctacagccccggctacgat
cgcagattggaccgtgtgatgggcccagagggaagcatggcgccccctggcggccagaac
agcatgggcccatctgccaatgaagccagcatgtatccccccaacagataccctcagcag
aggcacggaaacgatggttttggtcagcagtatcctcacagtatggccttcggttcccat
cagcccctttacccccagcagcagggctacaagcgtccgatggaggccatgttcccggct
gcgaagcgtcatgagggcgaggcattcggcgtgcagcagtacggctcccagcagtcggac
cctttcggcccctatggacccggtccgggggggttttcaggccccgagcaccggcctgtc
gccgggcagtaccagtacccatacggtcgggaccgccagggcctcccacagcatggcatg
atgggatcggcccctgcggcagcggcggacggggggccgcagcccagcttgtggcccccc
aggacagagatggggttctcgtacagccggcagggccaggggccccccttccccgatcag
gagggccggcccccaccggacgcccagtggccccccagtaacctcaaccagtgtcaacct
ccctttccctcccactcttcctcctcctcctcttcctccatgcccccccttccctccagg
cagcccccctcctctttccaggccacgcccaccatcccaaatcacgtgacccgcccccag
agcccctcatcgttcccccggcctccggtgggctccctgtcccccaatggcgccccctac
ctgcccgttaagaaaccaggggtccccaccgttcccccagccaatcagggcctccccctc
gtttacagagaggtcgttttcccgcccagctccgtggaggccacaccccccaagctgaaa
ccgcggcgacggctaacggcgaaggacacaggaacgccggaggcctggcgggtgatgatg
tcactgaagtcggggctcctggcggagagcacctgggcgctggacaccatcaacatcctg
ctgtacgacgacggcacggtgggctcgttcagcctgacgctgctgcccgggttcctggag
ctcatcgtggagttttatcgccgctgcctgatccagatgttcggcatcctgcaggagtac
gagatcggggccgagggcccgaaggcgacccccaaagacccgggggaagcgccgtcgccg
ctcaacaaggaggatgccaagcctgaggattcccctcagcagagcagcaagtacgacaag
tggccagtcagggtggaggaggccggggagagctgggcggaggtggagcgccgggccgac
ccaacccgacccaacggcttcatcagcggtctgctgcactggaaggccggaggaggagac
tccacggctcacatccagactcactttgagccccgatccagagacttcaggcccccagat
ccggagcaggagaagcagagcggaggagtggaggagcagcaaacagaggaggaggagcag
aagcagactggtcatcaaggaggttttccatctgaggtcagaggtcagcgcccagcccct
gctgaggctcagaatcccatcagcctccaggaggacgagccgcgctgctgggacgaggcg
ccgctgtccaccgccgagtcgtggcaggactccctggccagacgctgcatctgcgtctcc
aacatcatccgcagcctctccttcatccctggcaacgacgccgtcctgtcgcgccacccg
ggcctggttctgatcctgggccggctggtgctgctgcaccacagccacccgcacaggaag
cgagcgccgcccacctaccaacgggaggaggaagcgggccgggcctgtagccgcgacgag
tggtggtgggactgcctggcggcgctgcgagagaacacgctggtgacgctggccaacgtg
tcgggccagctggacctgtcgcagtaccccgaggacatcgtcctgccggtgctggacggg
ctgctgcactggatggtctgtccgtccgccgaggcgcaggacccgttcagcggggcaagc
ggcactgcggcgctgtcgcctcagcggctcgtcctggagtgcctctgcaagctgagcgtc
caggactgcaacgtggacctgctgctggccacgccccccttcagccgccagcgccagctc
ttcgccacgctggtgcgcctggtgggcgagcgccgcagccaggtgtgccgggagatggcg
gtggccgtgctgtccaacctggcgcgcggcgacgccacggcggcccgggccgttgccctg
cagaagggcagcgtgggaactctgatcggcttcctggaggacagcctggccgtggcgcag
taccagcagaacccgcacgccgccgctccgccgccagagccgcccagcatcaacatgatg
tgccgcgcggcgaaggcgctgctggccgtggcgagcgtggaggagaaccggccggagttc
gtcctgtacgagagccggctgctggacatctcgctgtcgtcggccctcaactcggcggtg
gcggccatcatgtgcgaagtgctgttcaagctgagccgctcgtga
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integrated database retrieval system
