Xiphophorus hellerii (green swordtail): 116734417
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Entry
116734417 CDS
T07363
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116734417
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116734417
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
ig
Ig_2
LRR_9
fn3
V-set
Sp38
DHU1_N
C2-set_2
LRRCT_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
116734417
NCBI-ProteinID:
XP_032441680
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Position
15:17564458..17587683
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AA seq
801 aa
AA seq
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MESFLVYLIVLGVAVKAHKVQICPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKRKDFANMTKLVDLTLSRNTIGSIAPYAFRDLENLRALHLDSNRLTRITND
TFSGMSKLHHLILNNNQLTHIHSGAFNDLTALEELDLSYNNLESAPWIAIQRMSNLHTLN
LDHNMLSLIPEGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGIMGPLSFALSF
GGNPLRCNCELLWLRRLQREDDLETCASPQHLAGRYFWTVSEEEFLCEPPLITRHSQELH
ALEGQSVTLRCKARGDPDPIIHWIAPDARLMSNSSRAVVHTDGTLEILISTVKDSGSFTC
VASNPAGEAHQTVDLLIAKLPHITNDTIAEQEPDPGSSDIATVTKTGAEAGGVPLGNAKT
SQEKKVVVAEATSTSALVKFNFHRSIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNILVNN
LAAGTQYDLCVLAIYDDQVTSLTATRVIGCIHFTTEPQYLRCHFMQSQFLGGTIVVIIGG
IIVASVLAFIIFLIVRYRVCSQGDADKALEMGDIRSLSSDGQLQGCGIPKSLSKQVLRPE
KNDKECARVALPPPEPTKQRPPVSVPTTKPSVPDCTVSTSAGSHSWHPASPGAPRPKRSG
APPKPSEGRRAEAQTDVELNNMNRNNSSEVKTATAVSTAPPGPGQPQKWTAAPRVPRPHQ
ASRHYMTVPAGAVRVNRRHSLNADSSYRERCYVAYPKVGAGLRSKRSLSMSGELPQLEST
TNIHRARDKLSRSEWLLESTL
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgttcctggtctacctgatcgtcctcggcgtggctgtgaaggcgcacaaggtc
cagatctgccccaaacgctgcgtctgccagatgctgaaccctaacctggcgacgttgtgt
gacaaaaaggggcttctgttcgtaccccccaacatcgacaggcacacggtggagatgcgg
ctcggcgataacttcgtcaccagcattaagcgcaaggactttgccaatatgaccaagctg
gtggacctgaccctctctcgcaacaccattgggtccattgcaccgtatgccttcagagac
ctggagaacctcagagctcttcacctggacagcaaccgactgacccgcatcaccaatgac
accttcagcggcatgtccaagctgcaccacctcattctcaacaataaccagctcacccac
atccacagtggggccttcaacgacctaacagcgctggaagagctggacttatcctacaac
aacttggaaagcgccccgtggatagccattcagaggatgtccaacctccatacgctcaac
ctggaccacaacatgctcagcctgattccagagggcactttctctgggctgcagaagctt
aagaggctggacgtaacctccaacaagctgcagaaactccctcctgaccccgttttccaa
agagccggggtcctggcgacgtccggcataatggggcccttgtcattcgcgttgagcttt
ggcggcaacccgttgaggtgcaactgcgagctgctgtggctgcggaggctgcagagggag
gatgatctggagacctgcgcttccccacaacacctagctgggcgttatttctggactgtt
tcagaggaagagttcctgtgcgagccgcctcttatcaccagacactctcaggagctgcat
gctttagagggccagagcgtgactctgcgctgcaaagccaggggcgacccggaccccatc
atccactggatcgcgccggacgcgcggctcatgtccaactcttccagagccgtggtccac
acagacggcacgctggagatcctcatcagcaccgtcaaggactcaggttccttcacctgc
gtggcctccaacccggccggagaggcccaccagacggtggatctgctcatcgctaaactc
cctcacatcaccaacgacacgatcgcggagcaagagcccgaccccggatcgtcagatatc
gccacggtgaccaagacgggagccgaggcgggaggggtgcctctggggaacgcgaagacg
agccaggagaagaaggtggtggtagccgaggccacctccacctcggccctggtgaagttc
aacttccacaggagcatccctggaatccgcatgtttcagatccagtacaacggcacatac
gatgactcgctggtgtacagaatgatccccccaaccagcaagaacattctggtgaacaac
ttggcggctggcacacaatacgatctatgtgtcctggccatctacgacgaccaggtcacc
tcgctgaccgccaccagggtgataggctgcatccacttcaccaccgagccgcagtatctg
cggtgccacttcatgcagtcgcagttcctcggcgggaccatcgtggtcatcattggaggg
attatcgtggcgtccgtgctcgccttcatcatcttcctcattgtgcgttaccgagtgtgt
agccaaggggatgcagacaaggccctggagatgggggatatccgatcactgagcagcgat
ggacagctacagggctgtggcatccccaaatccctctctaaacaggtcctccgtccagag
aagaatgacaaggaatgcgccagagttgccctcccgcctccggagccaaccaagcaacga
cctcccgtctcggtgcccaccacaaaaccttctgttcctgactgcacggtgtctacctct
gctggcagccatagctggcacccggcctccccaggagcgccgaggcccaagcgttccggc
gctccaccgaaaccctcggagggccggcgagctgaagctcagacggacgttgagctcaac
aacatgaaccgcaataactcttcggaggtcaaaacagccactgccgtctccaccgctccc
ccagggcctggccaaccccagaaatggactgctgctccgagagtcccgcgaccccaccaa
gcctcccgacattacatgactgttcctgcaggagcggtgagagtgaaccgcaggcactcg
cttaacgcagactcatcgtacagggagcgctgctacgtagcctaccccaaagtcggggcc
ggcctgcgctccaagcgcagcctgtcaatgagtggagagcttccccagctcgagagcaca
acaaacattcatcgagccagggacaaactatccaggtctgagtggctgctggagagcact
ttatga
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