Xenorhabdus hominickii: A9255_13615
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Entry
A9255_13615 CDS
T04538
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xho
Xenorhabdus hominickii
Pathway
xho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9255_13615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xho03019
]
A9255_13615
03009 Ribosome biogenesis [BR:
xho03009
]
A9255_13615
Enzymes [BR:
xho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A9255_13615
Messenger RNA biogenesis [BR:
xho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A9255_13615
Ribosome biogenesis [BR:
xho03009
]
Prokaryotic type
rRNA helicases
A9255_13615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
AAA_22
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AOM41516
UniProt:
A0A2G0QE73
LinkDB
All DBs
Position
complement(2977284..2979257)
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AA seq
657 aa
AA seq
DB search
MTTETEISFADLGLSTPILSALEDLGYEKPSPIQQQCIPHLLNGCDVLGMAQTGSGKTAA
FSLPLLHNIDAELKAPQILVLAPTRELAVQVAEACSEFSKHMRNVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSNLKGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEAIRRITRRFMNNPQEVRIQSNVTNRPDISQSYWSVHGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALEHNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPNAELLSQRRLEKFAATVQQQLESSDLDQYRTLLSKLGTGDELDME
TLAAALLKMAQGERPLILPPDPVRRPRREFNDRDDRRRNSNGNGFGERDRSDRGDRGDRS
DRGDRPRRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFATHST
IELPKGMPGETLSHFTRTRILNKPLNMQLMGDAQPFERRERRGGGRGGNGGNGNGGGNGG
NGPRRDRDSASNSNGGGRRFNNERRGGGERGSFRGRSNDDVNGGAPRRRPSQSNGNA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgagactgaaatctcttttgctgatttaggtttatcaacacctattctttct
gcattggaagacttgggctacgaaaaaccttctcctattcaacaacaatgtattcctcac
ctgctgaacggctgtgacgtgctgggcatggcacagacgggtagtggtaaaactgcggca
ttcagcttgccgttactgcataacattgatgctgaacttaaagctccacagatccttgtg
ttagcaccaacccgtgaactggcggtacaggttgctgaagcatgttcagagttttccaaa
catatgcgcaacgtgaatgttgttgcactgtacggtggacagcgttatgacgttcaatta
cgtgcattgcgtcagggaccacaagttgtggtgggaacgccaggccgtctgctggatcac
ctgaaacgtggaacattggatctgtccaatctgaaaggtttggtattggatgaagccgac
gaaatgttgcgtatgggcttcatcgaagatgttgaaaacatcatgagccagatccctgct
gaacatcagaccgctctgttctcagcaactatgcctgaagcgattcgccgtattacgcgt
cgattcatgaataacccacaagaagtccgcattcagagcaacgtgacaaaccgtcctgat
atcagccagagttattggtcagttcacggcatgcgcaaaaacgaagcgctggtacgtttc
cttgaagcagaagattttgatgctgcgattattttcgtgcgtaccaaaaatgcaacgctg
gaagtggcagaagcattggagcataacggttacaactctgctgccctgaatggtgacatg
aaccaggcactacgtgagcagacacttgagcgtctgaaagatggccgtttagacattctg
attgcaactgatgttgccgctcgtggtctggatgttgagcgcatcagcttggttgttaac
tacgacatcccaatggatgccgaatcttacgtacaccgtattggtcgtacaggccgtgca
ggccgtgcaggccgtgccttgctgtttgttgaaaaccgtgagcgtcgtttgttgcgtaac
gttgaacgtaccatgaaactgacaatcccagaagttgaactgccaaatgcggaacttctg
agtcagcgtcgtctggagaaatttgcggctacggttcagcaacaattggaaagcagcgat
ttggaccaataccgcacgctgttgtctaagttgggtactggtgacgagctggatatggaa
acactggccgcagctctgctgaaaatggcacagggtgagcgtccattgattctgccacca
gatccagttcgccgtcctcgccgtgaattcaatgatcgtgatgaccgtcgtcgtaatagc
aatggcaatggctttggtgagcgcgatagaagcgacagaggcgacagaggcgacagaagt
gatagaggtgaccgtcctcgtcgtgaacgtcgtgacgtgggtgacatggaactgtatcgc
attgaagttggccgcgatgatggtgttgaagtccgtcacattgtgggcgcaattgctaac
gaaggtgatatcagcagccgttatatcggtaacatcaaactattcgcgacgcactccaca
attgagctgccaaaagggatgccaggggaaacactgtctcacttcacccgcacccgtatt
ttgaacaaaccattgaacatgcagttgatgggcgatgcacagccattcgaacgtcgtgag
cgtcgtggtggtggccgtggcggtaatggtggcaacggtaacggtggcggcaatggtggt
aatggcccacgtcgtgatcgcgatagtgctagcaacagcaatggtggtggccgccgtttt
aacaatgaacgtcgtggcggtggcgagcgtggttctttccgcggtcgtagcaacgatgat
gtcaatggtggtgcaccacgtcgtcgtccgagccaaagcaacggtaacgcataa
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