Xanthomonas hyacinthi: FZ025_15895
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Entry
FZ025_15895 CDS
T06345
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy00300
Lysine biosynthesis
xhy01100
Metabolic pathways
xhy01120
Microbial metabolism in diverse environments
xhy01230
Biosynthesis of amino acids
Module
xhy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FZ025_15895 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xhy01002
]
FZ025_15895 (dapE)
Enzymes [BR:
xhy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FZ025_15895 (dapE)
Peptidases and inhibitors [BR:
xhy01002
]
Metallo peptidases
Family M20
FZ025_15895 (dapE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
QGY78041
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Position
3601415..3602542
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AA seq
375 aa
AA seq
DB search
MSDVVDLTCDLIARPSVTPDDAGCQDLIAQRLARAGFAIERLRFGQVDNLWATHGSGAPV
LALLGHTDVVPPGPREAWASDPFVPQIRDGVLYGRGAADMKSGVAGFVVAAEQFVAAHPQ
HPGTLALLLTSDEEGDALDGVRKVAETFRARGERIDWCITGEPSSTERLGDLLRVGRRGS
LSATLLVKGVQGHVAYPHKARNPIHLAAPALAELVARHWDDGYESFPPTSLQISNLHAGT
GANNVIPGDLQVAFNLRYTPHWDAPRLEAEIAALFDRHGLDYTLRWHRSGEPFYTPEGRL
RSVAREVLGAFAGAAPEESTGGGTSDARFIAPLGAQCIEVGPVNASIHQVDEHVRVADLE
ALPALYLRLIERLLS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtcgttgacctcacctgcgacctgatcgcccgcccctcggtcacgccggac
gacgccggctgccaggacctgatcgcgcagcggctggcgcgcgccggcttcgccatcgag
cggttgcgcttcggtcaggtcgacaatctgtgggccacgcatggcagcggcgcgccggtg
ctggcgctgctcggccataccgacgtggtgccgccggggccgcgcgaggcctgggccagc
gatccgttcgtgccgcagatccgcgacggtgtgctgtacggacgcggtgccgccgacatg
aagagcggcgtggccgggttcgtggtcgccgccgagcagttcgtcgccgcgcatccgcag
caccccggcacgctggcgctgctgctgacctccgacgaggaaggcgatgcgctggacggc
gtgcgcaaggtcgccgagaccttccgcgcgcgcggcgagcgcatcgactggtgcatcacc
ggcgaaccgtcctccaccgaacgactcggcgacctgctgcgggtcggtcgccgcggcagc
ctgtccgccacgctgctggtgaaaggcgtgcagggccacgtggcgtatccgcacaaggcg
cgcaatccgatccacctggccgcgccggcgctggccgagctggtcgcgcggcattgggac
gacggctacgagagcttcccgccgaccagcctgcagatctccaacctgcatgccggcacc
ggcgccaacaacgtgatccccggcgacctgcaggtggccttcaacctgcgctacaccccg
cactgggacgcgccgcggctggaagcggagatcgccgcgctgttcgaccgccatggcctg
gactacacgctgcgctggcaccgcagcggcgagccgttctacaccccggaagggcgcctg
cgcagcgtcgcgcgcgaggtgctgggcgccttcgccggcgcggcgccggaagagagcacc
ggcggcggcacctccgatgcgcgcttcatcgcgccgctgggcgcgcaatgcatcgaggtc
ggcccggtcaacgccagcatccaccaggtggacgagcatgtgcgcgtcgccgacctggag
gcgttgcccgcgctgtacctgcgcctgatcgaacggttgctgtcgtaa
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