Xanthomonas hyacinthi: FZ025_19785
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Entry
FZ025_19785 CDS
T06345
Name
(GenBank) type I secretion system permease/ATPase
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
xhy
Xanthomonas hyacinthi
Pathway
xhy02010
ABC transporters
xhy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
xhy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FZ025_19785
03070 Bacterial secretion system
FZ025_19785
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhy02000
]
FZ025_19785
02044 Secretion system [BR:
xhy02044
]
FZ025_19785
Transporters [BR:
xhy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FZ025_19785
Secretion system [BR:
xhy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
FZ025_19785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
HlyD_3
HlyD_D23
Peptidase_C39
CusB_dom_1
Biotin_lipoyl_2
SMC_N
ABC_ATPase
Biotin_lipoyl
AAA_29
AAA_22
DUF87
AAA_16
CENP-P
SbcC_Walker_B
NB-ARC
CSD2
AAA_21
Motif
Other DBs
NCBI-ProteinID:
QGY78766
LinkDB
All DBs
Position
4484536..4488126
Genome browser
AA seq
1196 aa
AA seq
DB search
MQQGNAALAIVSAPEESSSSGATDLGLRGLVLLAQYHGVAADAAQLAHEFGRNGESFDEA
TLLLAARKVGLKARVSALPASRLPMANLPALAWDRDGQAFLIARIQGEQALVHDLAERRP
RQLSLAELEQRYGGRLMQVASRASVLGQLARFDFTWFVPAVIKYRRMLLEVFVVSLFIQL
FALVTPLFFQVVMDKVLVHNGLTTLDVIAIGLVCMALFEVVLTGLRTYVFAHTSSKIDVE
LGARLFRHVLALPLAYFESRRVGDTIARVRELENIRSFLTGQALTSVLDLLFTGVFLAVM
FWYSGGLTLIVVLSLPAYALISAAITPVLRKRLQDKFARGADNQSFLVETISGIGTVKAM
AVDPRATRTWDNQLAGYVSAGFGVTRVATVGQQSVQLVQKLVGVAILFFGAKLVIEGKLS
LGQLIAFNMLSGQVAAPIIRLAQLWQDFQQVGISVERLGDILNTRTEVTGSRVALPPIQG
RVSFERVHFRYRPEAPEVLAGIELEIKPGEVIGIVGRSGSGKSTLTKLVQRLYTPERGRV
LIDGHDLALADPAWLRRQLGVVLQENFLFNRSIRENIALADPGTPLERVIHAAKLAGAHE
FISELPEGYDTSVGEHGTGLSGGQRQRVAIARALITDPRILILDEATSALDYESEHAVMS
NMRAICKGRTVLIIAHRLSTVRQANRIVVVEKGSIVETGTHAELVDRPDGHYARLHRLQG
GGGGMRHLIDGCKDFLQRYGKVFRAAWQVRHELDPPRRQADELAFLPAHLELIETPTSPT
VRWTMRIIVAFFCVALLWACLGKLDIVAVAPGKMVVDSRTKVIQPADTAVVRRILVRHGQ
KVKAGEPLIELDATTTGAELAQAGEALTEARVAALRLAALAASIGSGVTPHLAPAADVPA
GRLAAEQALASSQFEALQAKRHNLQATIAQRRAELQTTRDAIEPLAESARISKGRAEDYG
RLVEGKYVGRHEYLLREQERIAAERDLATQRNRMREIESALIAAEEELRVLVTDFRRQTL
DELREAEQKVAQGTPELAKAGQRDRLMTLRAPVDGTVQQLAVHTVGGVVTPAQELLAVVP
QEALEVEATVLNKDIGFVRPGQVVTVKIESFPYTRYGYLTGKVVSVSHDAAQDEDLGLVF
PARIRLDGSSLDIDGVVVSMSAGMTLSAEIKTGKRRVIDYLLSPLRQHVGEGLRER
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggggaacgccgcactcgcaatcgtgagtgcgccggaggagtcatcctcgtcc
ggcgcgactgatcttggacttcgcggactggtgctgctggcgcagtaccacggcgttgcc
gccgatgccgcgcagctagcacacgaattcggccgcaacggcgagtcctttgacgaggcc
acgctgttgctggccgcccgcaaggtaggcctgaaagccagggtatccgcgctgccggca
tcgcgattgccgatggcgaacctgcccgcgcttgcctgggaccgcgatggccaagccttc
ctgatcgcgcgcatccagggcgagcaggcgctcgtgcatgacctggccgaacgtcgcccg
cggcagttgagcctggccgaactggaacagcgctacggcggccggctcatgcaggtcgcc
tcgcgcgcctcggtgctcggccagctcgcgcgcttcgacttcacctggttcgtcccggcg
gtcatcaagtaccggcgcatgctgctggaagtcttcgtggtctcgctgttcatccagttg
ttcgcgctggtcaccccgctgttcttccaggtggtgatggataaggtgctggtgcacaac
ggcctgaccacgctggacgtgatcgccattggcctggtctgcatggcgctgttcgaggtg
gtgctgacgggcctgcgtacctatgtattcgcgcataccagtagcaagatcgacgtcgag
ctgggggcgcggctgttccgccacgtgctggcgctgccgctggcgtacttcgaatcgcgc
cgcgtcggcgacacgattgcgcgcgtacgcgagctggagaacatccgcagcttcctcacc
gggcaggcgctcacctcggtgctggacttgctgttcaccggggtattcctggcagtgatg
ttctggtacagcggcgggctgaccctgatcgtggtgctttcgctgccggcctatgcgttg
atctcggcggcgatcaccccggtattgcgcaagcgcctgcaggacaagtttgcccgtggc
gccgacaaccagtccttcctggtggagaccatcagcggtatcggcacggtcaaggcgatg
gcggtggatccgcgggcgacgcgcacctgggacaaccagttggccggctatgtcagtgcc
ggtttcggggtcacccgggtggccacggtcggccagcagagcgtgcagctggtacagaag
ctggtgggcgtggcgatcctgttcttcggcgccaagctggtcatcgaaggcaagctctcg
ctgggccagctgatcgccttcaacatgctgtccgggcaagtggccgcgccgatcatccgc
ctggcccagctatggcaggacttccagcaggtcggcatttcggtcgagcggctgggcgat
atcctcaacacccgcaccgaagtgaccggcagccgcgtggcgctaccgccgatccagggc
cgggtgagcttcgagcgcgtgcacttccgctaccggcccgaagcgccagaggtgctggct
ggcattgagctggagatcaagccgggcgaggtcatcggtatcgtgggccgctcgggctcg
ggcaagagcacgctgaccaagctggtccagcggctgtatacccccgagcgcgggcgagtg
ctgatcgatggccacgacctggccctggccgacccggcctggctgcgccggcagttgggg
gtggtgttgcaggagaacttcctgttcaaccgcagcatccgcgagaacatcgcgctggcc
gatcccggcacgccgctggagcgggtgatccacgcggccaagctggccggggcccatgag
ttcatctccgaattgcccgaaggctacgacacctcagtcggcgaacatggcaccggcttg
tccggcggccagcgccagcgcgtggcgatcgcgcgggcactgatcaccgatccgcgcatc
ctgatcctggacgaggccaccagcgcgctggactacgagtccgagcatgcggtgatgtcc
aacatgcgtgccatctgcaagggccgcacggtgctgatcattgcccatcgcctttccacc
gtgcgccaggccaaccggatcgtggtggtggagaagggcagcatcgttgagaccgggacc
cacgctgaactggtcgaccggcccgatggccattacgcgcggctgcaccggctgcagggg
gggggtggtggcatgaggcacctgatcgacggctgcaaagatttcctgcagcgctacgga
aaggtattccgcgcggcctggcaggtgcggcacgaactcgacccgccgcgccgccaagcg
gatgagctggccttcctgcccgcacacctggaactgatcgagacgccgacttcgcccacc
gtgcgctggacgatgcggatcatcgtcgcgttcttctgcgtggcgctgctgtgggcgtgc
ctgggcaagctggatatcgtcgcggtggcgccgggcaagatggtggtggattcgcgcacc
aaggtgatccagccggcggacactgccgtagtgcggcggatcctggtgcgccacggacag
aaggtgaaggccggcgagccgctgatcgagctggacgccacgaccaccggtgctgaactg
gcacaggccggcgaggcgctgaccgaagcgcgcgtagcggcgctgcgccttgctgccctg
gctgcgtccatcggtagtggcgtcaccccgcacctggcgcccgcagcggatgttcccgca
gggcgtctggctgccgagcaagcgctggccagcagtcaattcgaggcactgcaggccaag
cggcataacctgcaggcgaccatcgcccagcgccgtgccgagctgcagaccacgcgcgat
gcgatcgagccgcttgccgagtcggcgcgcatctccaagggtcgcgcagaggattacggc
aggctggtcgaaggcaagtacgttgggcgtcatgagtacctgctgcgtgagcaggaacgc
attgcggccgagcgcgacctggcgacccagcgcaatcggatgcgcgagatcgagtcggcg
ctcatcgctgccgaggaagaactgcgagtcctggtgaccgacttccgtcgacagaccctc
gacgagctgcgcgaggccgagcagaaggtcgcgcagggtacgccggagctggccaaggcg
ggccagcgcgatcgcttgatgaccctgcgtgcgccagtggacggcacggtccagcagctg
gcggtgcatacggtaggtggcgtggtcacgccggcgcaggagctgctggcggtggtgccg
caggaggcgctggaggtggaggctaccgtactgaacaaggacatcggcttcgtgcggccg
ggccaggtggtgacggtgaagatcgagagttttccgtatacgcgctatggctatctcacc
ggcaaggtggtgagtgtttcgcatgacgctgcgcaggatgaggacttggggttggtgttc
cctgcgcgcatccgcctggacggcagcagcctggatatcgatggcgtggtggtgagcatg
agtgcgggcatgacgttaagtgcggagatcaagacggggaagcggcgggtgattgattac
ttgcttagtccgctgcgacagcatgtgggtgaaggattgcgggagcgataa
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