Xenopus laevis (African clawed frog): 100037061
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Entry
100037061 CDS
T01010
Symbol
srrt.S, ars2, ars2-A, serrate, srrt, srrt-a, srrt-b
Name
(RefSeq) serrate RNA effector molecule homolog A
KO
K27103
serrate RNA effector molecule
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
100037061 (srrt.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
100037061 (srrt.S)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Anp1
Motif
Other DBs
NCBI-GeneID:
100037061
NCBI-ProteinID:
NP_001116168
Xenbase:
XB-GENE-6255528
UniProt:
B1H1X4
LinkDB
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Position
3S:130549130..130562574
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AA seq
849 aa
AA seq
DB search
MADSDDEYDRRRRDKFRRERSDYDRSREREERRRDDWSDREWDRGRERRSRGEYRDYESR
SRRERFSPQRHDLSPPQKRMRRDWDDHGSDPYHSGYDLPYSSSAGGPGYGPPQPWGHPEM
HVLQHHGIPIQARLGNLHQVDLGTPAPIMKTFKEFLLSLEDTVDETEAVKRYNDYKIDFR
RQQMQEFFLAHKDEEWFRSKYHPDEVGKHKQESQASLRNRLSAFMFLMEKSWLNEVQLDI
AQSPAIIKVLDAAVIKMEGGTEIDLKILDEEEEEAKREAAKKEEAPVTETEKVVTEEKEA
PAKPENDKEDESEEKPVKPQEEEEKKVEKKVEKEEPERETRKPGTRKRKRSGESDDGSDS
ESDTETASPKPKAETPNQNGRAEETPKKEEDTEKQKEKQKEDTVKPRPLHKTCSIFMRNI
PPNISKAEITALCKRYPGFMRVALSEPQPERRFLRKAYVTFDRSVNIKEICWSVQNIRLR
ECELSPGVNRDLTYRVRNINGITLHRPIVRNDIKLAARLIHALDERAVLWEGEQMVLAQN
PILKNITDYLIDEVNAEEEELLFSAGRTPETELPKDGNPTEISVERDDKLIKVLDKLLFY
LRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVAEWQKTFEEKLAPLFA
VRETLSEEESIKMGKKDPEQEVEKFVAANTQELGKEKWLCPLSGKKFKGPEFVRKHIFNK
HAEKIEEVKKEVVFFNNYLIDSKRPALLEVKPLQPPVGAAGQALAAGLLYPHQGPPALLP
YAQPRPPVLGYGGAPQFPPNPYGAGRGNYDAFRGQGMYPGKPRNRMMRGDPRSIIEYRDL
DAPDDVDFF
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagtgatgatgagtatgatcgcaggaggagggacaagttcaggcgggagaga
agtgactatgacagatccagggaacgggaggaaaggaggagagatgactggagtgaccga
gaatgggatcgtggaagagagaggaggagccgtggagagtatagagactatgagagcagg
agccgcagagagaggttttctccccaaaggcacgatctcagcccaccccagaaacgcatg
agacgagactgggacgaccatggctcagatccgtaccacagtggctatgacttgccctac
tccagttcagcaggtggcccagggtatggtcctcctcagccatgggggcatccagaaatg
cacgttctgcagcatcacgggattcctatccaggccagacttggcaatctgcaccaggtt
gatctggggacgccggcgcccatcatgaagacattcaaagagttcttgctctccctggaa
gacactgtggatgagacggaggcagtaaagagatacaacgattacaagattgatttccgg
cggcagcagatgcaggaattcttcctcgcgcacaaagatgaggagtggttccggtccaag
tatcacccagatgaagtgggaaaacataaacaggagtctcaggcttctctgcgcaaccgg
cttagtgcattcatgttccttatggagaagagctggttaaatgaggtgcaactggacatt
gctcagtctccagccatcattaaggtgttggacgcagccgtcattaagatggaagggggc
acggaaattgacctcaagattctagatgaggaggaggaagaagcaaagagagaggctgca
aagaaagaggaggcaccagtgactgagactgagaaggtggtaacggaggagaaggaggca
ccagccaagcctgaaaatgacaaagaagatgaatctgaagagaaacccgtgaaaccacaa
gaggaggaagagaagaaagtagagaagaaagtcgaaaaggaagagccagagagggaaaca
agaaagcccggcacgaggaagcggaagagaagcggtgaaagtgatgatggaagtgactct
gaatctgacactgagacggcgagccctaagcctaaggctgaaactccaaaccagaatggt
cgggctgaggagactcccaaaaaagaagaagatacagaaaagcagaaagaaaaacagaaa
gaagacaccgtgaaaccccggccgctgcataaaacctgctccatcttcatgaggaacatc
cctcccaacatttccaaagccgagatcactgcactgtgcaagaggtatcccggcttcatg
agggttgcactgtcggagccccagccagaaagaaggtttctccgaaaagcttacgtgaca
tttgatcgaagtgttaacatcaaggagatctgctggagcgttcagaatatccggctccgt
gaatgtgaactgagtcctggagtgaacagagatctgacctatcgtgtccgaaatataaac
ggaataaccctgcaccgtcccatcgtgcgcaatgatatcaaactggcggccaggctgatt
cacgctctggatgagagggctgtgctgtgggagggagagcagatggttttggcccagaat
cccattctgaagaacatcactgattatctcatcgatgaggtgaacgcagaggaagaggag
cttttgtttagtgcgggaaggaccccggaaacagaactgcccaaagatgggaaccccaca
gagatcagcgtggagcgagacgataagcttatcaaggtgctcgataaactcctgttttac
cttcgcattgtccattctgttgattattataacacctgcgagtatccaaatgaggatgaa
atgccaacgaggtgtggaatgatgcatgtgcggggacccctacctcccaaccgggtgtct
catggggaagtggctgagtggcagaagacctttgaggagaagttggcgccactgtttgca
gttcgggagactctctctgaagaggaatcaataaagatgggaaagaaagacccagaacag
gaggtggagaaatttgtagccgcaaacacccaagaactgggcaaagagaaatggttgtgc
cccctcagcggcaagaaattcaagggcccggagtttgtgcgcaagcatatcttcaacaaa
cacgctgagaagattgaggaggtgaagaaggaggtggtgttcttcaacaactacctgatt
gacagcaagcggcccgcactcctggaggtgaaacctttacagccaccggttggcgctgct
gggcaagcattggctgctgggctactttatcctcaccagggaccaccagccctcttacct
tacgcccagccccggcctcctgtactgggttatggaggtgcacctcagttccctcctaac
ccctacggtgctggacgtggaaattacgatgcttttaggggccaagggatgtaccctgga
aagccacgaaaccggatgatgaggggggacccacgctccatcattgaataccgagacctc
gatgcgcccgacgacgtggatttcttttaa
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