Xenopus laevis (African clawed frog): 100048914
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Entry
100048914 CDS
T01010
Symbol
bdnf.S, bdnf, bdnf-a, bdnf-b
Name
(RefSeq) brain-derived neurotrophic factor precursor
KO
K04355
brain-derived neurotrophic factor
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100048914 (bdnf.S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xla04052
]
100048914 (bdnf.S)
Cytokines and neuropeptides [BR:
xla04052
]
Cytokines
Growth factors (RTK binding)
100048914 (bdnf.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Spaetzle
Motif
Other DBs
NCBI-GeneID:
100048914
NCBI-ProteinID:
NP_001078951
Xenbase:
XB-GENE-955559
UniProt:
Q63ZM5
A0A974D1H7
LinkDB
All DBs
Position
4L:15349565..15416400
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AA seq
247 aa
AA seq
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MTILFLTMVISYFSCMKAAPMKEASVRGQNGLAYPGLRTHGTLESIGGPSGSRGGGLPSL
TDTFEQVIEELLEEEQSIRQSEESKDSDLYSSRVMLSSQVPLEPPLLFLLEEYKNYLDAA
NMSMRVRRHSDPARRGELSVCDSISEWVTAANKKTAVDMSGQTVTVLEKVPVSKGQLKQY
FYETKCNPMGYMKEGCRGIDKRYWNSQCRTTQSYVRAFTMDSKKKVGWRFIRIDTSCVCT
LTIKRGR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccttttccttactatggttatttcatacttcagttgcatgaaagctgccccc
atgaaagaagccagtgtcagaggacaaaatggcctggcctatccgggtcttcggacccat
ggtactcttgagagcataggtggtcccagtggctcaagaggaggtggacttccttcactg
acagatacttttgagcaagtcatagaagaactcctggaagaggaacaaagcataaggcaa
agtgaggaaagcaaggactctgacttgtattcatctagagtaatgctaagcagtcaagta
cctttggagccaccattgcttttcctacttgaggagtacaaaaactacttggatgcggca
aacatgtccatgagggtccggcgccactctgacccagccaggcgtggagagctgagtgtg
tgtgacagtattagtgaatgggttacagcagcaaacaagaaaactgcagtggacatgtcg
gggcagacagttactgtcctagaaaaagtcccagtatccaaaggccaactgaagcaatat
ttctacgagaccaaatgcaaccctatgggttacatgaaagaaggctgcagaggcatagac
aaaaggtactggaactctcagtgccgaactactcagtcttacgtgcgggctttcaccatg
gatagcaaaaaaaaagttggttggcgctttataagaatagacacttcttgtgtatgtaca
ctgaccattaaaaggggaagatag
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