Xenopus laevis (African clawed frog): 100462913
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Entry
100462913 CDS
T01010
Symbol
cacna1f.L
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X3
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04010
MAPK signaling pathway
xla04020
Calcium signaling pathway
xla04260
Cardiac muscle contraction
xla04261
Adrenergic signaling in cardiomyocytes
xla04270
Vascular smooth muscle contraction
xla04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100462913 (cacna1f.L)
04020 Calcium signaling pathway
100462913 (cacna1f.L)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
100462913 (cacna1f.L)
09153 Circulatory system
04260 Cardiac muscle contraction
100462913 (cacna1f.L)
04261 Adrenergic signaling in cardiomyocytes
100462913 (cacna1f.L)
04270 Vascular smooth muscle contraction
100462913 (cacna1f.L)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
100462913 (cacna1f.L)
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
100462913 (cacna1f.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
HemY_N
DUF4834
FAM176
Motif
Other DBs
NCBI-GeneID:
100462913
NCBI-ProteinID:
XP_018096517
Xenbase:
XB-GENE-6492373
UniProt:
A0A8J0U4P8
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All DBs
Position
8L:complement(10981883..11017684)
Genome browser
AA seq
2006 aa
AA seq
DB search
MSEPEENDKVPGPAPPYSSEEAEPFMASAEAALVCWRYSIDGGPMMNGTDTLNSTASSQA
QKRRQYNSKHKNQGTGGVHRSPRALFCLYLNNPIRRACISIVEWKPFDILILMTIFANCV
ALGVYIPFPEDDSNIANHNLEQVEYIFLIIFTVESFLKIIAYGLVLHPSAYIRNGWNLLD
FVIVVIGLFSVILEQFSHKPGDAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVL
NSIMKAMVPLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFYIGSDLVSEEEPAPCAFSG
HGRECLLNNTECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAMGYEL
PWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDW
ITQAEDLEPDQEIRDERHPSLPASETTSVNTENIDEEHANCCARCLSKLSQTGCCRKIRR
WNRAFRRKCRLAVKSVTFYWIVLLLVFLNTLTIASEHYQQPDWLTEIQAYANKVLLSLFT
LEMLLKMYSLGLQAYFVSFFNRFDCFVVCGGILETFLVEFDIMSPLGISVLRCVRLLRIF
KVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRST
FDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPFFPGMLVCVYFIILFICGNYILLNVF
LAIAVDNLADGDNINSKDKKENKKSEKKDENSVKVPCEDENENQQEEGSEASEEEEDDEG
SLPESHLDKIADFAPKEKVLPIPEGSAFFILSNTNLLRVGCHKLIHHHIFTNLILVFIIL
SSISLAAEDPIRAHSFRNHILGYFDYAFTSIFTVEILLKMTAYGAFLHKGSFCRNWFNLL
DLLVVSVSLISFGIHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNI
MIVTTLLQFMFACIGVQLFKGKFYSCTDEAKRSPEECKGTFIIYKEGDVSHPMVRERIWH
NSDFNFDNVLSGMMALFTVSTFEGWPALLYKAIDAYGENVGPIYNYRVEISIFFIVYIII
IAFFMMNIFVGFVIITFRAQGEQEYKNCELDKNQRQCVEYALKAQPLRRYIPKAKCQYKV
WYMVNSTGFEYIMFVLILLNTVALAMQHYEQSKPFNYAMDILNMVFTGLFTVEMVLKLMA
FRPKHYFCDAWNTFDALIVVGSLVDIAVTEVNNGWHVGESSEDSSRISITFFRLFRVMRL
VKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIYAVIGMQTFGKIAMQDGSQINRN
NNFQTFPQAVLLLFRCATGEAWQDIMLASLPGKRCDSESDYGPGEEFTCGSNFAIVYFIS
FFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVV
TLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNADGTVTFNATLFALVRTSLKIKTEGNL
DTANEELRAVIKKIWKRTKQKILDEVIPPPEEEEVTVGKFYATFLIQDYFRKFRRRKEKG
LLGTEILPCNSTTLQAGLRSLQDLGSEIRRAISSELEEEEDLSGFRTMGLQVSEDKSVCE
NVTLVQATEKIFGSVVSLTNSVGGGGREDQLPSSRRSSLMNRSVGGSKDSLLVPPTPPPN
VPSSMKRRQMNSRRRSSEGSAITPTVHEEEESAAEDELRSRPPSPGNIPSSELQRQSSLE
ESQRRSASPQEGVKVLPPPAAPPPGLRANGTLEGRATQRRRLLPPTPGTKTAFSIQCLKR
QGSCDDIPIPGTYHQNAPPCRTRSQVYGSTDSWQRNSYSANGTHSWANPPKRGRLLYAPL
ILVEEDSALPTIPCAHWYQEEDGKTPYCHYTQLHVPGQRLSEKRGSADSLVEAVLISEGL
GVYARDPKFVAFAKREIADACQMTIDEMESAASDLLSQSRKGSWTGNNGHSYRDETWNGL
LYSDEESIHCREEEELRDEMACVSSF
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccagaagaaaatgacaaagttccaggccccgctcctccgtactccagcgag
gaggcggagccatttatggcaagtgcagaggcggctctggtctgttggcgatactccatt
gatggagggcccatgatgaacggcactgacaccttaaattccaccgctagctcccaggca
cagaaaagacggcagtacaacagcaagcacaagaaccagggaaccgggggtgttcatagg
agcccaagggctctcttttgtctgtacctcaacaaccccatccgaagggcctgcatcagc
attgtagaatggaaaccatttgatattctcattctcatgacgattttcgccaactgcgtg
gcgttgggtgtctacattccatttcccgaggacgattccaacattgccaatcacaatttg
gaacaagtggagtacatcttcctcatcatcttcaccgtggagtccttcctaaagataatt
gcatatgggctggtcttgcaccctagtgcctacatcagaaacggctggaacctgctggac
tttgtgattgttgttatcggattattcagtgtaattttggagcagttctctcacaagcca
ggagacgcccatcacatgagtggaaaacctggtgggtttgatgtgaaagctctgcgagca
tttcgtgtcctgcgacctctcaggctcgtatctggagtcccaagtctacacattgtatta
aattccataatgaaagccatggttcccttattgcacattgccttgctagtcctctttgta
atcatcatttatgccattattgggctggagcttttcattggtcggatgcacaagacctgt
ttctacatcggttccgatctagtttcagaggaggaaccagccccctgtgcattctcagga
catggaagagaatgtctcctcaacaatacagagtgcagggggaagtgggaagggcccaac
ggaggaatcacaaactttgataacttcttctttgccatgctgactgttttccaatgtatc
accatggaaggttggacagatgtcctctactggatgcaggacgccatgggttatgagctg
ccctgggtatatttcgtcagccttgttatttttggatcattttttgtcttgaaccttgta
ttgggtgtgttgagtggagaattttctaaagaaagagaaaaggccaaagcccgaggtgac
ttccagaagttgagggagaaacagcagatggaagaggatctcaagggatacctagactgg
atcacccaggctgaggatcttgaacctgatcaagaaatcagagatgagcggcaccctagc
cttcctgcaagtgagaccacttctgtgaacaccgagaatatagatgaggagcatgctaac
tgctgtgcccgatgtttgagcaagctgtcacagactgggtgctgccgcaagataaggagg
tggaaccgagctttccgacggaaatgtcgcctggctgttaaatcggtcaccttctattgg
atagttctgctcctcgtcttcctcaacacgctgaccattgcatcggagcattaccaacag
ccagattggctgacggagattcaagcatatgctaacaaggtactcctgtcactattcaca
ctggagatgcttctcaaaatgtacagccttgggttgcaagcctactttgtgtctttcttc
aaccgttttgattgcttcgtggtgtgtggtgggatcttggagaccttccttgtagaattt
gacatcatgtctcctctgggaatctccgtcctgcgttgcgtacggctgctgaggatcttt
aaagtcaccagacactgggcatcattaagtaacttggtggcttcccttttgaactccatg
aaatctattgcttctctgctgctgcttctcttcctcttcattataatcttctccttgctc
gggatgcagctctttgggggcaaattcaactttgatgagacccagaccaagagaagcaca
tttgacacctttcctcaggctctgcttactgtcttccagatactcacaggtgaggactgg
aatgccgtcatgtatgatgggatcatggcttatgggggaccatttttccccggaatgctg
gtctgtgtgtattttatcatactcttcatatgtggtaactacatcctactcaatgtcttc
ttggctatcgctgtggacaatctggctgatggtgacaatatcaacagcaaagataaaaaa
gagaacaagaaatcagagaagaaggatgaaaactctgtgaaggttccgtgtgaggatgag
aatgaaaaccagcaggaggaagggagtgaagcatctgaagaggaggaagatgatgagggc
agcctcccagaatcacacttagataaaattgcagactttgctccaaaagaaaaggttctt
cccattccagagggcagtgcattcttcatccttagtaataccaacctgctccgtgttggt
tgccacaaactgattcaccatcatattttcaccaacctcattttagtcttcatcatcctc
agcagcatttccctggcagctgaagatccaatccgtgcccactcctttcgtaaccatatc
ctgggatattttgattatgcatttacttctatcttcacagtggagatcttgctgaagatg
acagcatatggtgcgttcttgcacaagggctctttctgtaggaactggttcaatctgctg
gatctccttgttgtcagtgtatctctcatctcctttggaattcattctagtgcaatctcc
gttgttaagattctacgtgtgctgcgagtgttgcgtccactaagagccatcaacagagcc
aaggggcttaagcacgtggttcagtgcgtctttgttgcgatccgaacaatcggtaacatt
atgatagtgaccactttgctgcagtttatgtttgcctgcataggagttcagcttttcaag
ggaaagttttacagttgcacggacgaggctaaacgcagcccagaggagtgcaaaggcaca
tttattatttataaggaaggggacgtttcacaccccatggtgcgggagagaatttggcac
aatagtgacttcaactttgacaatgtcctgtcaggcatgatggccctgtttacggtgtcc
acttttgaaggctggccagcgttactttacaaagccattgatgcctacggagagaacgta
ggacctatttacaattaccgggtggagatctccatcttctttattgtctacatcatcatc
atcgctttcttcatgatgaacatctttgtgggttttgtgatcatcactttccgagcacaa
ggagagcaggagtacaagaactgtgaactggacaagaaccagcgccagtgtgtggaatat
gcattgaaggctcagcctctccggaggtacatccccaaggcaaagtgtcagtacaaagtc
tggtatatggtcaactcaaccggctttgagtacatcatgttcgtccttatcctgctcaac
actgtcgctttggctatgcagcattatgagcagtccaaaccttttaattatgcaatggac
atcctgaatatggtcttcactggacttttcactgtggaaatggtgctaaagctgatggca
tttcgacccaagcattatttctgtgatgcctggaacacatttgatgctctcattgtagtg
ggcagccttgtggatatcgcagtcacagaggtcaataatggatggcatgttggtgagagt
tcggaggatagctctcgtatttccatcacgttcttcaggctcttccgcgtaatgcggttg
gtaaagcttctcagcaaaggagaaggaatcaggacactgctgtggacgttcatcaaatcc
ttccaggctttgccgtatgttgctctactcatcgctatgatattttttatctacgcggtc
atcggcatgcagacatttgggaaaattgcaatgcaagatgggagtcaaatcaacaggaat
aacaacttccagaccttccctcaggctgtgcttttgctcttcaggtgtgcaaccggggag
gcctggcaagacatcatgttggccagtctgcctgggaagcgttgtgacagcgagtctgac
tatggtcctggggaggaatttacctgtgggagtaactttgccattgtgtatttcatcagt
ttcttcatgctctgcgccttcctgatcattaacttgtttgtggctgtcattatggacaat
tttgactaccttacaagggattggtcaattctgggtccacaccatttagatgagtttaag
aggatctggtcagaatacgatcctgaagccaagggtcgcatcaaacacctggatgtagtc
accttgcttcgcaggatccaacctccgctgggttttggaaaactgtgtccccaccgtgta
gcatgtaagaggctggtggccatgaatatgccattaaatgcagatgggaccgtcaccttc
aatgctacactgtttgctcttgttcgaacctcactaaagatcaaaacagaaggtaaccta
gatactgccaatgaagagttaagagctgtcatcaaaaagatctggaaaagaaccaagcaa
aagatactagatgaggttatcccccctcctgaagaagaggaggtgacagtggggaaattt
tatgccaccttcctgatccaggattactttcgcaagtttcgccgaagaaaggaaaagggg
ctcctgggaacagagattttgccttgtaattccacaacactgcaggcagggctgaggagc
ctacaggatcttggttcagagatacgacgggcaatatcctctgagctggaagaggaagaa
gacctctctggattcagaacaatgggacttcaggtttcagaagacaaatcggtatgtgaa
aacgtaactttggtgcaggccactgaaaagatttttgggtctgtagtatctcttactaac
tcggttggaggaggaggaagagaggatcagctaccctcatccagaagatcatcactaatg
aatcgatctgtaggaggatctaaagacagtttgctggtcccacccacaccaccacctaat
gtaccatccagtatgaagaggaggcagatgaactcacggaggaggagctcagaaggcagc
gccatcactcccactgtacatgaagaggaggagagtgcagcagaggatgagctaagatct
agacctccctcaccagggaacatcccaagcagtgagctacagcgtcagtctagtttggag
gagtctcaacggcgctcagcatctcctcaggagggagtgaaagttctgcctcctccagct
gcacctccacctggtctcagggctaacggcaccctggagggaagagcaacccaaagaagg
cgtttgctgccccctaccccaggtaccaagactgcattcagcatccagtgcctgaagaga
caggggagctgtgatgatatacccatcccaggaacataccatcagaatgcaccaccatgc
agaacaagaagccaggtttatggaagtaccgattcctggcaaagaaacagttactccgcc
aatggaactcactcatgggccaatccaccaaagcgaggacgcctcctttatgcaccccta
atactggtggaggaagatagtgcactacctactattccctgcgctcactggtatcaggag
gaggacgggaagacaccctattgccactacacccagctgcatgtgccagggcagaggctt
tctgaaaagagaggtagcgctgacagtctagtagaggcagttttgatatcagaaggcctt
ggggtctacgcacgggaccccaagttcgttgctttcgccaaacgtgagatcgcagacgcc
tgtcagatgaccattgatgagatggagagtgccgccagcgacttgctaagtcagagcaga
aaaggcagttggactggaaataatgggcactcctaccgagatgagacgtggaatggactt
ttgtacagcgatgaagaatctatacactgccgagaagaagaggaactaagagacgagatg
gcctgtgtgtcttcattctaa
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