Xenopus laevis (African clawed frog): 108703944
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Entry
108703944 CDS
T01010
Symbol
setd1a.L
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A isoform X4
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108703944 (setd1a.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108703944 (setd1a.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108703944 (setd1a.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108703944 (setd1a.L)
HMT complexes
COMPASS/SET1 complex
108703944 (setd1a.L)
COMPASS/SET1 complex (yeast)
108703944 (setd1a.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
108703944
NCBI-ProteinID:
XP_018095738
Xenbase:
XB-GENE-6487653
UniProt:
A0A8J0TVP8
LinkDB
All DBs
Position
9_10L:132730547..132763450
Genome browser
AA seq
1788 aa
AA seq
DB search
MDDLRNLVRELTTDKRPPPWDMMPKSKTRDTECRVDNKKQLQETCNGVRCPQMEPEGESH
RGAGFQWRSYKLLLDPVLHSRRTTQKVYRYDGIHFNISDGAFLPLGDVRDPRQHRMWSKP
REISLPVPKFKFDEFYVGQVPQKEITFAHLNDNVREPFLADMCRKFGNVEEVEILLHPKT
RKHLGLAKVLFSSSKSARDTVTHLHNTSVMGNIIHAELDLRGQQRQKYYDLIVSGSYNPQ
TVPTSGRRAQDRLQPEMVDSRRRLSSDSSSSSYLPNNGTPSSQDLGSSYSQYTPSSSQGT
PYTPRSGTPFSQDSAYSSRQGTPSHSSTQDSSGYKSRRQENNSGDSYSRRSGHHYSPAPS
SSASSSSQHDSSQKRFHRHPQRSSPQSSYRSRHRKPPPPPEEPPLIGFPGTPPLPPPPPP
PPPPSDDIHTDRDYRIAHPPLPPSIPAPSTALLVPPPPPTEGWEPPPPPLPPLPPACSPP
PSPARSCSPLLDGVSESLPFTQHSSSLDSRIEALLKEQRSKFSFLSSDTEEEEEATAEAP
AQEPVVVEEVPPIVHDPYTPPPPASFEDVSAEAILRMAEIGRTANGQDRGMLMQEPPFLR
DPSSWSRNSFPLQLLSSGEDMEISDEEINMEMPGAAVPPFPLLPHLHGAAGTFQTPPIPS
PLLPLPHHHAQPPSPFPLLPNTAARGRLGDLAAGSSTPSALDPSPSSSSAPHIYDFVNSM
ELVNRLGNQWGGTSMSFQMQTQMLSRLQQNMQGKNLPFEDPYPPPLLPHPIPPRLHQPHP
LPPLMSEQVFSPAFPPYPAQQPQPLLPPREFTARTAQGPSQEMRGPGWAPGGGVDPHAST
IESVLAALIQEMKNTMQRDLNRKMVENVAFRAFDDWWERKEEKAKPFQNVAKPPPREEEK
EKPRPKEPGLLSLVDWAKSGGSEGFGFGTGLREALRLPSFKVKRKQPSEDEDIEQKRPRP
STPAEEEQDERDKETETDSRQGGKITQKEDKRVHKRRRPFHLDSEGEEASEESASEKDDD
DDDDDELSDKGEDSEEEISPLTKLSSKIIDDSDSSSESDSCSSSSSSSSSSSSSSSASSP
ASSDDEEEEEQEETPNILGVSEPARPPSPASPPPKLEPIAVKKETLDIPPAPEVKEEQST
EIPEPPPPPSPDPLSKPCAPPSPPLQLLPPPKKRRKTVSFQLLPEEEASESKPQNHHVPE
NASPERPVSPLPEPKLMLPLPTEKTPLPSPEAPSAQPSELHTSPKPEPEELPPPAKEPSP
KKQLPEQLTVLNLPWDHASLVKSYPPQVHREDGMEEEAEEDFEKEPEVEEVKPVPLIEAP
TQPEPKSPLLSESCELERTESIEDLLFAPVRQILLEHSYACIPAALKQPPRKRRLSLESE
KSNELVHVDLGQAVLEAPEEVVCIGGGLIPGGDGEAGLLDVGHLEITSPRKMEEALVKLV
HDEPKIKSKRTLAKEAEPGEVTSEEEEEEEEGTWVSSRQLRSQKNRKTVQRRLPPLYEIR
SEFEQMTILYDIWNMGLDYEDMAFLRDTYERLLQEDHSTDWLNDTHWVHHPITNIADPKR
RKSRQDGLREHQTGCARSEGYYAISRKDKDKYLKVLPVAAEEQEVDTQGTNRVLSERRSE
QRRLLSAMGSTALLDSDLLKLNQLKFRKKKLRFGRSHIHEWGLFAMEPIAADEMVIEYVG
QNIRQVVADMREKRYSQQGIGSSYLFRMDQDTIIDATKCGNLARFINHCCSPNCYAKVIT
IESQKKIVIYSKQPIGINEEITYDYKFPLEDNKIPCLCGTENCRRTLN
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctaaggaacttggtccgggagctaacgactgacaagcggccccctccatgg
gacatgatgcctaaaagcaaaacaagagacaccgagtgccgggttgataacaagaaacaa
ttacaagaaacatgtaacggtgtcagatgtccccagatggagcccgagggcgaaagtcac
agaggggccggcttccaatggaggagttacaaactgttgttggatcccgtgttacacagt
cgcagaacaacacagaaagtctatcgctatgatggaatccacttcaacatctccgatgga
gcattccttccattgggggatgtgcgggaccccagacaacatcgtatgtggagcaaacca
cgagagatatccctccctgttcctaaatttaagtttgacgagttctacgtgggacaagtt
ccccagaaagaaatcacttttgcgcatctcaatgacaatgtgcgggagccttttctggct
gatatgtgccgcaagtttgggaatgtggaggaagtggagatactgctgcaccccaaaact
agaaaacatctgggactggccaaggtcctcttctccagctcaaaatcagccagggataca
gtcacgcacctccacaatacgtctgttatgggcaacatcatccacgcagagcttgacctc
cgaggtcagcaaagacaaaaatattacgacctgattgtgagcggctcttacaacccccag
acggttccaacgagtgggagacgggcacaggacaggctgcagccagagatggtggactcc
aggcgcagactttccagtgactcctcctcctcctcctacctccctaataacggaactcct
tcctctcaggatctgggctcttcctacagccagtataccccatcctcctcgcaaggcacc
ccctacactcctcgtagtggcacccccttctctcaggactctgcctattccagcaggcag
gggactcccagtcattcctccactcaggattcttccggatataaatccaggcgtcaggag
aacaattctggggactcgtattcccgtcgttctggacaccactattccccagctccgtct
tcctctgcatcgtcctcgtcccagcacgatagcagccagaaacgctttcacaggcacccg
cagcgctcctccccacagtcatcttatcgctctcgccaccgcaagccaccaccaccccca
gaagaacctcctctgattggctttcctggaaccccacccctaccaccaccaccacctcct
cctcccccaccttctgatgacattcacacagatcgtgattaccgaatagcccacccgcct
cttcctccttcaatacctgcaccttcaactgctcttctggtgcctccacctccacctaca
gaaggatgggagccaccacctcctcctctacctcctctaccaccagcctgttctcctcct
ccttctccagctcgttcctgctctccactccttgatggggtctcagagagtctgccattc
acacaacacagtagcagcctggactcccgaattgaggctttgctgaaggaacaacgttca
aagttctccttcctgtcctctgacacagaggaggaagaggaggcaacagcagaagcacct
gctcaagagccagtcgtagtggaagaggttcctcccattgttcatgatccatacacccct
cccccacccgcaagttttgaggacgtatctgcagaggccatactaagaatggcagagatt
ggcaggacagcaaatggccaagacaggggtatgctgatgcaggagcctcccttcctaaga
gaccccagcagttggtcacgtaactccttccctctacagctgctgtcgtctggagaagat
atggagatttcggatgaagagattaatatggagatgcccggagcagcagtaccgcctttt
ccgcttctgccacatttgcatggagccgcaggcacctttcagactccgcccattccgtcc
cctttgctccccctgccccaccatcacgctcagcccccttctcccttccctctcctgccc
aacactgctgcccggggaagactgggagacctcgccgctggctcatccacaccttctgca
cttgatccctcaccctcctcttcatctgccccccatatatatgactttgtgaactcaatg
gagttagttaaccgcctgggtaaccaatggggcggcacctctatgtcctttcagatgcag
acacagatgctcagccgactgcagcagaacatgcagggtaaaaacttgccctttgaggac
ccttaccccccacctctcctcccacaccctattcctcctcgcctccaccagccccatcct
ctgccacccctaatgtccgagcaagttttttccccggccttccccccttaccctgcccaa
caacctcagcctctattgcctcctcgggagttcactgccagaacagcacaggggcccagc
caagagatgaggggtccaggctgggccccagggggaggagtggacccccatgcttcaaca
attgaaagtgtattagcagcattgatccaggagatgaagaacacaatgcagagagacctt
aacaggaagatggtggaaaatgtggctttcagagcatttgatgattggtgggagcgtaag
gaagaaaaggccaagccttttcaaaatgtggccaagccacctccacgggaagaggagaag
gagaagccgaggcccaaggagccgggcctgctctcattggtggactgggccaagagcgga
ggttcagaaggctttggttttggtactgggctcagagaggctctcaggctgccatcattt
aaggtgaaaaggaaacagccatcagaagatgaggacattgagcagaagaggcctcgaccg
tccactccagctgaggaagaacaggatgaaagagacaaggagaccgagactgactctagg
caagggggcaaaatcacacagaaggaagacaagcgagtgcacaagcgccggcgtccattc
cacttggacagtgaaggagaggaggcctccgaggagtctgcgtcagaaaaggatgacgac
gatgatgatgatgatgaactgagtgataaaggagaggattcagaagaagagatttctcct
ctcaccaagctctcctccaagatcatcgacgacagcgacagctccagcgaatcagacagc
tgcagcagcagctcatcttcatcttcctcgtcttcatcatcctcctcggcgtcctcccca
gcctcctctgatgatgaggaggaggaggaacaagaggagaccccaaatattctgggtgtt
tctgaacctgccaggccccctagccctgcctctcctcctccaaaactggaacccatcgct
gttaaaaaagagacgttggatataccaccagctccagaggttaaagaggaacaatccaca
gaaattccagagcctccaccacctccttctcctgaccctctgtcgaaaccctgtgctcct
ccatcacctccactacagctcctccctccccccaagaaaaggcgtaaaaccgtgtcattc
cagctccttccagaagaagaggcgtcagaaagcaaaccccaaaaccaccatgttccagaa
aatgcttctcctgaacggcccgttagccccctgccagagcccaagctcatgttgccttta
cccactgagaagacccctcttccatctcctgaggctccttctgcacaaccttcagagctt
cataccagccctaaacctgagcctgaggagcttccacctccagccaaagaaccgtcccct
aagaaacagctcccagagcagctcactgtactcaaccttccttgggaccatgcatcattg
gtgaagtcctacccacctcaagtgcatagagaagacggcatggaggaagaagcagaagaa
gactttgaaaaggaacctgaagtagaagaggtcaaaccagttcctctgattgaagcacca
acgcagccggaaccaaaatctcctcttttatcagaatcctgtgagttagaaaggacagaa
tccatagaagatctactctttgctccagtacgacagatactcctagagcacagctatgca
tgtatacccgctgcactcaaacagcctcctaggaaacggcgactttccctggagtcggag
aaatccaatgaacttgtacatgtagatcttgggcaagcagtgctggaggccccggaggag
gttgtttgcataggaggaggtctgataccagggggagatggggaggcagggctgctcgat
gttgggcatttggaaattacatcaccaaggaaaatggaagaggctctggtgaaactggtt
catgatgagccaaagatcaaaagcaaaaggacgctggctaaagaggcggagccaggggag
gtaacctctgaggaagaggaggaagaggaagaaggaacatgggtaagctctcgccagttg
aggtcccagaagaaccggaaaactgtccaacgacggttgcctcctctgtatgagattcgc
agtgagtttgagcagatgactatcctgtatgatatctggaacatgggacttgactatgaa
gatatggccttcctccgtgacacctacgagagactcctgcaggaggaccacagcacggac
tggctcaatgacacccactgggtgcatcacccaatcaccaacattgccgaccccaagcgg
aggaagagccgtcaggacggtctgcgggagcatcagacgggctgcgccaggagtgagggg
tattacgccattagcaggaaggacaaggacaagtacctgaaagtacttcctgtagccgcc
gaggagcaggaggtggacacacaaggcactaaccgggtgctgtcggagcgtcgctcggag
caaaggcgcctgctcagtgctatgggctctactgctctgctggacagtgatctgctcaaa
ctcaaccagctgaagttccgaaagaagaagctgaggttcggccgcagtcacattcacgag
tggggtctgtttgctatggaacccattgctgccgatgaaatggtgatcgaatacgtgggg
cagaacattcgacaggtggtggcagacatgagggagaagagatattctcagcagggaatc
ggcagcagttatctcttccgcatggatcaggacaccattatagacgccaccaaatgtggg
aacttggcccgatttatcaaccactgctgctcccccaactgttacgccaaagtgatcacc
atcgagtcccagaagaaaatcgtcatttactccaaacagccaatcggcatcaacgaggag
atcacgtacgactacaagttccccctggaggacaacaagatcccctgtttgtgtgggaca
gagaactgccggcggacattgaattaa
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integrated database retrieval system
