Xenopus laevis (African clawed frog): 108715814
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Entry
108715814 CDS
T01010
Symbol
usp4.S
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
108715814 (usp4.S)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108715814 (usp4.S)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108715814 (usp4.S)
Peptidases and inhibitors [BR:
xla01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108715814 (usp4.S)
Ubiquitin system [BR:
xla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108715814 (usp4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
108715814
NCBI-ProteinID:
XP_018116780
Xenbase:
XB-GENE-17342664
UniProt:
A0A974D1A0
A0A1L8GHB6
LinkDB
All DBs
Position
4S:104710224..104749011
Genome browser
AA seq
977 aa
AA seq
DB search
MAEGGGGGSETGPAQGHCTTRAPIPGPTPELCKSGDTETQKAELGELLKTALKKGDEWYL
IDSRWFKQWKKYVGFDAWDMYNVGESNLYPGPVDNSGLFADQDTQTLKEHLIDELDYMLV
PTEAWEKLMNWYGSVEGQHPIVRKVVEHGLFVKNCKVEVYLIELKLCDDSDPENVIARHF
SKADTIDTIEKEMRNIFNISAEKETRLWNRYMTNTYEQLTKKESTVQDAGLYQGQMIVIE
QRNADGTWPRQSQTKSSTATSRNFATSGKPSTSSYSSSSSMTNGDSSTYSLNNSSGLNKG
GYTPSYSSYSYREPSSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTRYFLMDEYKKEINR
ENPLGMKGEIAVAYAELIRQIWSGEHSYMAPRMFKTQVGRFAPQFSGYQQQDSQELLAFL
LDGLHEDLNRVKKKPYLELKDANGRPDSIVATEAWDNHLRRNYSIIVDIFHGLFKSTLVC
PECHKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRSDPHCKSKQYRLTVPKMGVVSDLCSA
LSKLSEVPEENMVVTDVYNHRFHKIFQMDEMLSHIMERDDIFVYEVKSRKAEEWITLPIC
FRERRYRQATSTGTNLFGQPRMISVPKHNLTLDVLYEIVLERLQRYVKSPHPELYTCLSS
DNGACNGSNGVCDDEMDHQEEDQDEQEESQEETNGQSDESVEEENSEGGCSPCNKMPKKA
LECRKRLFTFSLVNSYATADVGSMPAKGYLKFSSFATVAIDWDSESKKLFYDDQEAEAFD
KHESMMQPQKKKVTVALRECMQLFTKTETLGEHDPWYCPNCKKHQRATKKFDLWSLPKIL
VVHLKRFSYNRFWRDKLDAVVEFPIRDLNMSEFVCDPQAGPYMYDLVAVSNHYGGMGGGH
YTAYAKNQEKGQWYYFDDSSVSQASEDQIVTKAAYVLFYQRQDNVDCKNSSPTASIGPPA
AEEDLEERGDCDSMDTM
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggaggaggtggaggtagcgaaacgggaccggcacagggacactgtaccaca
cgagcacctatccccgggccgacaccggaactgtgcaaaagtggggacactgagacccaa
aaggccgagctcggggaattactgaaaacagcgctaaagaagggagatgagtggtatctc
attgacagtcgatggttcaagcagtggaaaaagtatgttggttttgatgcctgggacatg
tacaatgtgggagaaagcaatctctacccagggcctgttgacaattcaggactctttgca
gatcaagatactcagacattgaaagagcatctaattgatgagctggattacatgttggtg
ccaaccgaggcatgggaaaaattaatgaactggtatggaagtgttgaaggacaacatcca
atagtgagaaaggtggtagaacatggtctttttgtaaagaactgcaaggttgaagtttac
ctcattgagctaaaactatgtgatgatagtgacccagaaaatgtgattgcacgtcacttc
agcaaagcagacaccatagatactattgaaaaggagatgagaaatatatttaatatttct
gctgagaaagagacaaggttatggaacagatacatgactaacacgtatgaacagctcacc
aaaaaagaaagcactgtgcaagatgcaggactttatcagggccagatgatagtcattgag
caaaggaatgcagatggtacatggcctagacagtctcaaacaaaatcaagcacagcaaca
agtagaaattttgctacctctggaaaaccatcaacaagcagctattcttcatcctcttcc
atgacaaatggagacagcagtacctattctctgaacaacagttcaggcttgaacaaagga
ggatacactccatcttacagttcatatagttacagggagccatcatcacagccaggtctt
tgtggccttagcaatctggggaacacttgctttatgaactctgccctccagtgtctgagt
aacaccccgcccttaacaaggtactttctcatggatgagtataagaaggaaattaacaga
gaaaatccactgggcatgaaaggggagattgcggtggcctatgcagagctgattcggcaa
atttggtccggtgaacattcttatatggcccctcgtatgttcaagacacaggttggtcga
ttcgctccacagttctctgggtaccaacagcaggactctcaagaactcctagcatttctc
ctggatggtctccatgaggatttaaacagagtcaaaaagaagccatatctagagctgaaa
gatgctaatgggcggcccgattccattgtggcaactgaagcttgggataatcatctgcgg
cggaactactccatcattgtagatattttccatggccttttcaagtctaccctggtgtgc
ccagaatgtcacaaagtctctgtgactttcgacccattttgttatctcacccttcctttg
cccatgaagaaagatcgcacgatggaggtgtttcttgttcgttctgaccctcattgcaaa
tcaaaacagtatcggttgactgtgccgaagatgggagttgtttcagacctgtgttcagcc
ctttctaagctatcagaagtgccagaggaaaatatggtggttactgatgtctataaccat
cgctttcacaaaatttttcaaatggatgagatgctgagccacattatggagagagatgat
atatttgtatatgaagtgaagtctagaaaagctgaagaatggattacacttcccatttgc
ttccgggagagacggtatcggcaggccacatcaactggcacgaacttgtttggccagccc
cgcatgatttctgtaccaaagcacaatctcactttagatgttctatatgaaattgtgctg
gagagattacaacggtatgtaaagagtcctcatcccgagttatatacctgcttgagttca
gacaatggggcatgcaatggctcaaatggtgtatgtgatgatgagatggatcatcaagag
gaggatcaagatgagcaggaagaatctcaggaagagaccaatggacagtctgatgagagt
gtggaagaagaaaactctgagggaggctgtagcccttgtaacaagatgccaaagaaagcc
ttggaatgccgcaagaggctgttcactttcagtttggtgaattcatatgccactgcagat
gtgggatcaatgcctgccaagggatacctaaaattcagctcttttgcaacagttgccatt
gactgggattctgaaagcaagaaattgttttatgatgatcaggaagcagaggcttttgac
aaacatgaatcaatgatgcagcctcagaagaaaaaagtaacagttgcccttcgagagtgc
atgcagctttttacaaagacggagacgcttggggagcatgacccctggtattgtccgaac
tgcaagaaacaccagcgagccaccaagaagtttgatctctggtccctgccaaaaatcttg
gtggtacatttaaagcgtttctcatacaatcgcttttggagggacaagctggatgctgtg
gttgagtttccaatcagggatctgaacatgtccgaatttgtctgtgacccacaagcgggt
ccctatatgtatgatcttgttgcagtttcaaaccactatggaggaatgggaggaggtcat
tacaccgcatatgcaaagaaccaagaaaaaggccagtggtactattttgatgatagtagc
gtctctcaggcttctgaagatcagattgtgacgaaagccgcttacgttcttttctaccag
cgccaggataacgttgattgtaaaaactcatcacctacagcctcaatcggccctcctgct
gcggaggaagatttggaagagcgaggagactgtgactctatggacaccatgtag
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