Xenopus laevis (African clawed frog): 108715891
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Entry
108715891 CDS
T01010
Symbol
lamb2.S
Name
(RefSeq) laminin subunit beta-2 isoform X2
KO
K06243
laminin, beta 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04510
Focal adhesion
xla04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108715891 (lamb2.S)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108715891 (lamb2.S)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
ATG17_like
EzrA
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
108715891
NCBI-ProteinID:
XP_018116915
Xenbase:
XB-GENE-17330794
UniProt:
A0A974D2Y2
A0A1L8GHT1
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All DBs
Position
4S:complement(116873018..116936132)
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AA seq
1783 aa
AA seq
DB search
MAPSLWPFGFVITALITGSISQVPDQQHGCSQGSCYPATGDLLVGRADKLKSTSTCGLRR
AQPYCIVSHLQDEKKCFVCDSRKPYNPLYNPISHRIENVITTFAPHRKKAWWQSENGVSE
VAIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRTWQIYRYFAHDCASSFPNVSRS
ALRKVDDVICESRYSDIEPSMEGEVIYRVLDPAIQIRDPYGPNIQNLLKITNLRINFTKL
HTLGDNLLDSRVEIKEKYYYALYELVVRGNCFCYGHASECAPIEGLSRDVEGMVHGRCVC
KHNTKGLNCEQCDGFFNDHPWRPAEGRSTNACKKCNCNNHSHKCHFDMAVYLSTGNVTGG
VCDDCVDNTMGQNCELCKPFFYKDPSKDIRNSAVCKACDCDPDGSLDGGLCDAQDNPALG
LIAGQCRCKDYVEGPRCDRCKTGFFGLSANNFQGCQRCQCDPRGTISDGAQCDPISGDCF
CKRFVTGPTCNQCLPEFWALSNDLHGCRSCDCDVGGAWDNHCATETGQCRCRSHMVGRQC
NQVKSGYYRIHLDHYTYEAESALHRQGCSVLERERPLGRPATWTGPGFALVPEGGILEFQ
ISNVPYSMEYDVIIRYEPQLSATWEQVKISVIRPGPIPTSSPCGNTIPADDLMVASLPPG
TRHVVLPQPVCLEHGVSYTIRLEFSRYSLRERVPGASILVDSLVLVPRYAAMEMFIAGDP
ASIQRKDTFESYRCHSNSGNVIKSPTTEECTGLITSMSAIIHDGALPCSCDPQGSLSSEC
DPNGGQCQCKTGLIGQRCDRCAPGTYGFGPTGCRECECNKEGSSHNFCDPHTGQCPCRPG
AFSSRCDRCQPGHWGFPNCRQCQCNGHSEECDQRTGACLTCRDHSTGDRCERCIAGFFGN
PVRGSGDHCRPCPCPEGPNSGRHFAASCHQDPRSRQVICNCKQGYSGSRCDECSPGFFGN
PFQTGGRCLLCQCNNNIDMTDIGACDRRNGQCIKCMFNTEGRFCEQCRIGFYGDASRRNC
RKCTCNYLGTEPNQCPSREDCMCDRTSGQCHCLPNVMGQNCDRCSPNFWNMASGKGCQPC
NCDPNHSFSLACNEFTGTCLCRPGFGGITCTDCQENYWGNPNIQCRACDCDGRGIKAPQC
NRATGHCLCRAGVSGVRCDQCARGFSGQFPDCQPCHQCFGDWDRIVQDLATRTKSLVQRG
KDIQLSGVAGVYQKNFRDIEKKLAKAQSIVNSRNATVESVTKLMKIMDDLRNKINESTEA
LTQLEVELTAVQDENFDANHDLAELERDARSLNMTAKERSHQLDVLKNSNFLGAYDSIQQ
SHAKSRQAEKQANNATSNVPSPVSHSAGTREKAQQLITHKRDDFNRKNAANRLALNDLAA
KTDTLDIKKINEKVCGAPGDAPCSESPCGGAGCRDDEGKRHCGGLNCNGAVATADNALVR
ARHAEEELQKALGEVEVIFRKVAAAKIKADRAKQRAQATLDRANETKARVEQSNKELREL
IQQIKDFLNQEGADPDSIEMVASRVLDLTIPATPQQIQSLAEEIKDRVKTLANVDAILDQ
TATDVRKAEQLLHEAKRAKNRAENVKNTAESVKKALDDARRAQNAAEGAIQTANHDIKDT
ERKLTAIQTATSSAENHLNNAMDRVGNLDKQIDALKMKRANNSLAASRTEESATAALDKA
NDAKKILEGQLADKYKTVQNVVDWKAKNIKDAKTKADQLQDEAKKLLENAQDKLKRLQDL
EVEYTKNEKLLQDKAKQINGLEDKMKKILHAINQQIQIYNTCQ
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtccttgtggccatttggatttgtgataactgccttgatcacaggatccatt
tctcaggttcctgaccagcaacatggttgttctcaaggaagctgctacccggccacggga
gacttgctggtgggccgagcagataaactcaaatcgacgtcaacctgtggccttcggaga
gcacagccatactgtatagtcagccatttgcaggatgaaaagaaatgcttcgtctgtgac
tctcgcaaaccctacaaccccttgtataaccccatcagccaccgcattgaaaatgtcatt
acaacttttgctcctcatcggaaaaaggcatggtggcagtctgaaaatggtgtctctgag
gtcgctattcagttagatctggaggctgaatttcatttcacccacctgatcatgaccttc
aagaccttcaggccggcggccatgctggtggaacgctctgcagactttgggcgcacctgg
cagatttaccgttactttgcacatgactgtgcctcctccttcccaaacgtgtcccgcagc
gccctgaggaaggtggacgacgttatctgtgaatcccgttactctgacattgagccctct
atggaaggagaggtcatctacagagttttggatccagccatccagatccgagacccatat
ggtccaaatattcaaaatctcttgaagatcaccaacctcagaatcaactttaccaagctg
cacacgttgggtgacaacctcctggattcccgcgtggagatcaaagagaagtattactat
gccctctatgagctggtggtgcgagggaactgcttctgctatggccatgcttccgaatgt
gcgcccatcgaaggattgtccagagatgtcgagggcatggtgcatggaagatgcgtgtgc
aaacacaacaccaaggggctcaattgtgagcagtgtgatggtttctttaatgatcatccc
tggagaccagcagaaggacgcagcaccaatgcctgtaaaaaatgcaactgcaacaatcac
tctcacaagtgtcacttcgacatggctgtgtacttgtctactgggaatgtcactggtggg
gtgtgtgacgactgtgtggacaacaccatgggccagaactgtgaattgtgcaaaccgttc
ttctacaaggatccaagcaaagatatccggaacagtgcagtctgcaaagcctgtgactgt
gacccagatgggtcgttggacggggggctgtgtgacgcccaagataacccagctttgggt
ctcattgctggacagtgccgatgcaaagattacgttgaaggcccaagatgtgatcgatgc
aagactggattctttggcttgagtgcaaataactttcaaggctgccaaagatgccagtgt
gacccaagaggtacaatctcggacggtgcccaatgtgacccaatcagcggtgactgtttc
tgcaaacgctttgtgactgggccaacatgtaaccagtgtctgccagaattttgggccctc
agcaatgacctccatgggtgcagatcctgtgactgtgacgttggcggggcctgggataac
cactgtgctacagagactggtcagtgtcggtgccggagtcatatggttggcaggcaatgt
aaccaggtgaaatcaggctactaccgcatacacctggatcactacacgtacgaggctgaa
tctgctttgcatcgacagggatgttcagtgttggagagggaacgtcctcttggtcgtccg
gccacatggactggtcctggatttgccctggttccagagggtggaatactcgagttccag
atcagcaacgttccctattctatggagtatgatgtcatcatacgctacgaaccccagctt
tcagcaacatgggaacaagtcaaaatatctgtaattagaccaggtcctatcccaacgagc
agcccatgtggtaataccatcccagctgatgatctgatggtggcatctctaccccctggc
acaaggcatgtagtcttgcctcagccggtttgtctggaacatggagtcagttatactatt
cgactggagttcagcagatacagtttgagagaaagggtacctggagccagtatattagtc
gattcgctggtgctggttcccagatatgcggccatggaaatgtttatagctggggacccc
gcatcaatacaacgcaaggacacatttgagagttaccgctgccacagcaacagtggaaat
gtgataaagtcacctactaccgaggagtgcaccggtctcatcacaagcatgtcggccatt
attcatgatggagccctgccctgcagctgtgacccacagggatctctgagctcagaatgt
gaccccaatggtggtcagtgtcagtgtaagactggcctcattgggcagcgctgtgaccga
tgtgcaccaggaacttatggatttgggccaaccggatgcagagaatgtgagtgcaataaa
gagggatccagtcacaacttctgtgacccgcacaccgggcagtgtccttgtcggcctggg
gcattcagttccaggtgcgaccgctgccagcctggtcactggggcttcccaaactgtcgg
caatgtcagtgcaacggtcattcagaagagtgcgaccagagaacaggggcatgtctaacc
tgccgagaccacagcactggtgacagatgtgagagatgcattgcaggcttttttggaaac
ccagtacggggctcaggggatcactgtcgtccctgcccctgccctgaggggcccaacagt
gggcgacatttcgcagcatcgtgtcatcaagacccccgttcaagacaagtcatctgcaac
tgcaaacagggttactcaggctctcgctgtgatgaatgttctccagggttctttggaaat
ccattccaaactgggggtcgctgccttctttgccagtgtaacaacaacattgatatgaca
gatattggggcatgtgaccgtcgcaatgggcagtgcatcaaatgcatgtttaacactgaa
gggaggttttgtgagcaatgtcgcattggcttttatggtgatgcatcaaggcgcaactgc
agaaagtgtacatgtaactacctcgggacggaaccaaatcagtgcccatcgcgggaagac
tgcatgtgtgacagaacaagtggacagtgtcattgcttaccaaatgtcatgggacagaac
tgtgaccgttgcagtcccaacttttggaacatggcaagtggcaagggctgtcagccgtgc
aactgtgaccccaaccattccttcagcctagcctgcaatgagtttactggaacatgtcta
tgccggcctggatttggtggtattacctgtacggattgccaggaaaattactggggaaat
cccaatatccagtgcagagcttgtgattgtgatggccgtggtattaaggcaccacagtgt
aacagagccaccggccattgcttgtgccgtgctggagtgtccggagtgcgttgtgaccag
tgtgcccggggattttctggccagtttcccgattgccaaccctgtcaccagtgtttcgga
gactgggaccgtatcgttcaagatctggccactcgtaccaagagcctagttcaaaggggc
aaagacatccagctgagtggggtagccggggtgtaccaaaagaacttccgtgacattgag
aagaaacttgccaaggctcagagcattgtcaattctcgcaatgccactgtggagtcagtg
actaaactaatgaagatcatggatgacctgcggaacaaaattaacgagtcaacggaggct
ctcacgcagttagaggttgagctgacagctgtgcaggatgagaactttgacgctaatcat
gacctggctgagttggaaagagatgctcggagtttaaacatgactgccaaggagagatcc
catcaactagatgtcctaaagaactcaaactttttgggtgcatatgacagtatccagcaa
tctcacgcaaaatctagacaggccgaaaaacaagccaataatgccaccagcaatgttccc
agtcctgttagtcattcagctgggaccagggagaaggcccagcagctaatcacacacaag
cgggatgatttcaacaggaagaatgcggctaatcgtctggctcttaatgatttagcagcg
aaaacagacacccttgacataaagaagatcaatgagaaggtctgtggtgctccaggagat
gctccatgctctgagagcccttgtggaggagctggctgtcgtgatgatgaggggaagaga
cattgtggtgggttgaactgtaatggagctgttgctactgctgacaatgccttggttcga
gcacgccatgctgaagaagaacttcagaaagcactgggagaagtagaagtgattttccga
aaggtggctgcagcaaagataaaggcagacagagcaaaacagagggcccaggccacactt
gatagagccaatgaaacaaaggcaagggtggaacagtcaaataaggagctgcgggaacta
atccagcaaatcaaggattttctgaaccaggaaggtgcagacccagacagcattgagatg
gtggcaagtcgtgtcttggatctcacaatcccagcgaccccacagcagatccagagtctt
gctgaagagatcaaagacagagtgaaaacacttgcaaatgtggatgccattctggaccaa
actgccactgacgtgcgcaaagcagagcaactgctgcatgaagccaaaagggccaagaac
cgagctgaaaatgtaaagaacacagccgagtctgttaaaaaggccctggatgatgctagg
agagctcagaatgctgcagaaggagctatccaaaccgccaatcatgacatcaaagacact
gagaggaaattaacagcgatccagacagcgacatctagtgcagagaatcatctcaacaat
gctatggatcgagtaggaaatctggataagcaaattgatgctctgaaaatgaaaagggcc
aacaatagcctggctgccagccgcacagaagaatcggccactgcagcattggacaaagcc
aatgatgccaagaagatcttagaaggacaactcgcagacaaatacaaaactgttcagaat
gtcgttgattggaaagccaaaaacattaaagacgcaaagacaaaagcagatcaacttcaa
gatgaggcaaagaaactcttagagaatgcacaggataaactaaagaggttgcaagatctg
gaagttgaatatacgaagaatgagaaacttctacaggacaaagcaaaacaaattaatggc
ctagaagacaagatgaagaaaattttacatgcaattaaccaacaaattcaaatttacaat
acctgccagtaa
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integrated database retrieval system
