Xenopus laevis (African clawed frog): 108716786
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Entry
108716786 CDS
T01010
Symbol
setd1b.L
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108716786 (setd1b.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
108716786 (setd1b.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108716786 (setd1b.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108716786 (setd1b.L)
HMT complexes
COMPASS/SET1 complex
108716786 (setd1b.L)
COMPASS/SET1 complex (yeast)
108716786 (setd1b.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
SGP
Motif
Other DBs
NCBI-GeneID:
108716786
NCBI-ProteinID:
XP_018118726
Xenbase:
XB-GENE-17346666
UniProt:
A0A1L8I106
A0A974E1V8
LinkDB
All DBs
Position
1L:complement(175963910..175990489)
Genome browser
AA seq
1955 aa
AA seq
DB search
MSFKEAKPGDRGKNPEDHGRKQTAQTASWMNGMEAGNQPSTSAEKKGHHWRSYKLIIDPA
LKKGQHKLYRYDGLSFSMPNSGVPPVDSVRDPRIGRIWTKIKELDLLVPKLKIDEFYVGP
VPPKQVTFAKLNDNIRENFLGDMCKKYGEVEEVEILYNPKNKKHLGIAKVLFATVKGARD
AVKHLHNTSVMGNIIHVELDTKGETRMRFYELLVNGYYTPQTLPVGTDLDASPTVNETPQ
VVVVEPVKRTKETSIGASVTPNSSTPFSHDTAYSSSRQGTPNSYSQFTPQSQGTPHTPRL
GTPFSQDSSYSSRQTTPAFHYGQDSGFKPRRHEKKFTDAYNRRPGHHYVHSSGSYRGPEH
TSNVAKPQAEILQLPRTPPSGNYKSAFSPYQGSTVFPQTDESQYPQTSRDMEYRRIGPQT
SESYTDAGCNSASLELKIVKEKPEEPPPPEPDSTTEQKISFSQTPERCETPGTPTLEAEM
QHDSLDTRIAMLLKEQRTQLHLIAGEQNSDHEIRMEGSPISSSSSQLSPIPPYSSSSHYQ
DVTPSSRPSSTGLEDISPTPLPDSDDDDEPIPGTASLCQNSRSASPIDQINQPVRKMESL
DKKELLVGDETPTSEKMDEGPPSSGEDMEISDDEVTPSPITSAECPITSSSVIASVIPIP
PPRFPPLPPPPPPQPGFPMPPPLPPPPPPTHPSVTVPPPPLPAPPGVPPHHILHPPPPYR
HFPMMQGEMMTVLGNHWGGMTMSFQMQTQMLSRMMQGQGSYPYHHFMGGSMQFGNQHPYR
PFAISAHLSRGQPWPPFPKFDPSVPPPGYKPKKEDPHKATVDGVLQVIVKELKAIMKRDL
NRKMVEVVAFRAFDEWWDKKESLAKQSLTPVKSGESKDEDKQKTKEQITSSLLESWNKGE
GLGFEGIGLGIGLRGAIRLPSFKVKRKEPPDAALAGDQKRIRPSHSVDDEDEESERDRDL
SGTASDLSKKDADAVNIRRRPARPLDSEGEEEVESEGDDGETSDKEDSSSEKEDQDDASV
SALSSKKQLYGAKEDEDDDDAQSSGKEEDVVSEEDDTTSVASSRAEMDSSDVSEESSEYE
SSSDSDDEIEGDDDEEEELIFEEDQSEELDFGQEDDIETEREVDVFREDVSEGSSSAKAE
TDLEDDELQKIELDIAQPAQETSHLRKKDLDVPLVESKEHKPDTLEAEKLSAVPKQEDVF
KEHEKAPSPMNEEEEYIELHLEPVPLGSENAPAAVQESMTIRPLTPTGAFGESGPVLKLE
EPRLQLNLTRIVAEDEELYPRTPGRDTAAHSDTEVTFQPGLKVPPSSLPLLQSHSKEDEC
SLPPEKHTGHLKVTKTLSEEELPRTPGRDIVVKTSHLGKSQSTETIPATPGSDAPLTGNS
LMLASPHIPGSPFSYLSQSPGIINSGIPRTPGRDFNFTPTFPESNTIFTCHPSGKTPSVD
EPDKKSFKEPTSASLTMNSVPSPISFASPPRGVPHMDIRLETDDLESSDAPAYFSNKLLS
EESECEFTKEQLPSTDESAPSPPLPPTEKRKEDRSKKPLSAHEFESCVGKNYETSAVALS
EGGLGKQLFIGQPDAVSGIKDPSAVPLDFRNDGLSENTVHESIIQKVPLKELENQLKEVL
KEEEDITKHKKSRNSRLKQYDEFSTVPSPEYSPPRAMFKPRSEFEEMTILYDIWNGGIDD
EDIKYMCITYDRLLQQDNGMDWLNDTLWVYHPTTSVYSPKKKKRDDGLREHVTGCARSEG
YYKIDDKDKLKYLINNRSLAEEPPIDTQGKSIPAQPQASTRAGSERRSEQRRLLSSFTGS
CDSDLLKFNQLKFRKKKLRFCRSHIHDWGLFAMEPIVADEMVIEYVGQNIRQVIADMREK
RYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVVTVESQKKIVIYSKQ
YINVNEEITYDYKFPIEDVKIPCLCGAENCRGTLN
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcaaggaggccaaacctggggacagaggcaagaacccagaagaccatggcaga
aagcagactgcacagactgcaagctggatgaacgggatggaggcaggcaaccagcccagc
acttcggccgagaagaagggtcaccattggcggagttacaagttgatcatcgacccggct
ctgaagaaggggcagcacaaactctatcgttacgatgggctcagcttcagcatgcctaac
tccggggtccctccagtggattcagtaagggatccccggatcgggcgtatatggaccaaa
attaaagagctggatttgctcgtccccaagctcaagatcgacgagttttatgtggggcca
gtgccccccaagcaagtgacgtttgccaaattgaatgataacatccgcgaaaacttcctg
ggggacatgtgcaagaaatacggggaagtggaggaggtggagatcctgtataaccccaaa
aacaaaaaacacctgggcattgccaaagtcctattcgccaccgtgaaaggcgccagggac
gcggtgaaacatttgcacaacacctcggtcatgggcaacatcattcacgtggagctggac
acgaaaggtgaaacgcgtatgcgcttctatgaactcttggttaatggttattatactcct
cagactcttccagttggaactgatttggatgcttctcccactgtgaatgaaacgccacag
gttgttgttgttgagccagtgaaacgtacaaaagagacttccattggtgcatcagttacc
ccaaacagcagtactccattttcccatgatacagcctattcaagctctcggcaaggtacg
cctaattcttacagccagtttacaccacagtcacaagggactcctcatactccccgctta
ggaacccctttctcgcaggattccagttattccagtcgtcaaacaacgccagcttttcat
tacggacaggactctggttttaaaccaaggagacatgaaaaaaagtttacggatgcttat
aacagaaggccaggccaccactatgtacacagttctggatcctacagggggcctgaacac
acatctaatgtggccaaacctcaagcagaaatattgcagcttccccgtactccacctagc
gggaattataaatccgcattttcaccttatcaaggaagtactgttttccctcaaacagat
gagagccagtatcctcaaacatcaagggatatggagtacagaaggatagggcctcagact
tcagaatcatatactgatgcagggtgcaactctgccagtttggaactgaaaatagtaaaa
gagaaaccagaggaacctccacctccagagcctgactctaccacagagcaaaaaatatca
ttttctcagaccccagagaggtgtgagacacctggaactccaactctggaggctgaaatg
cagcatgacagtttggacacacggattgcaatgctattaaaagagcaaagaacccagctg
catttaattgctggtgagcaaaactcagaccatgaaataaggatggagggaagtccaata
tcatcctcttcctctcagctttctccaatccctccttatagttcaagctcccattaccag
gatgttaccccttcatcccgaccctcaagcacaggattagaggatattagcccaacccca
ttgccagattctgatgatgatgatgagccgattcctggcactgcctcgctttgccagaac
tcaaggtcagcatctcccatagaccagataaaccagcctgtccgaaaaatggagagtctg
gataagaaagaacttttagtgggtgatgaaaccccaacatctgagaaaatggatgagggt
cctccatcctcgggagaggacatggagatctcagatgatgaagttaccccttctccaatc
acaagtgcagagtgtcccataaccagttcatctgtcattgcctcagtcattcccattcca
ccacctaggtttccgcctctgcccccaccacctcctccacagcctggatttcccatgcca
cctcctttaccccctccaccgcctcctacccatccatcagtaacagtaccaccacctcca
ttgcctgcaccacctggggtgcctccgcatcacatattgcaccctccacctccatatcgt
catttccctatgatgcaaggggaaatgatgactgtccttgggaaccactggggtgggatg
acaatgtccttccaaatgcaaactcaaatgctcagccgtatgatgcaagggcagggttct
tacccctaccaccatttcatgggaggctccatgcagtttggtaaccagcacccttatcgg
ccatttgctatatctgcacacctttccagaggacagccttggccaccctttccaaagttt
gatccatctgtaccaccaccaggctacaagcccaaaaaggaggatcctcacaaagcaaca
gtggatggcgtcttgcaagtcattgtcaaggagctgaaagctataatgaaaagagatctg
aaccgcaagatggttgaggtggtggcttttagggcgtttgatgaatggtgggataaaaag
gaaagtttggcaaagcaatctttaacacctgtaaaatctggggagagcaaggacgaagat
aaacaaaagactaaggagcaaataacatctagcctcctggaaagctggaataaaggggag
ggattaggctttgagggtattggactgggcattggtctgcgtggtgcaatccgactaccc
tcttttaaggtaaagcggaaagaacctcctgatgctgcactggctggagatcagaagagg
attcgtccatcacattcagtagatgatgaggatgaagagtctgaaagagatcgagatctc
tctggtacagcatctgacttatcaaagaaagatgctgatgcagtaaacatccgaagaagg
ccagcaagacccttagacagtgaaggggaagaagaggttgaaagtgaaggagatgatggg
gagacttcagataaagaagactcatcttctgagaaagaagaccaagatgatgcttctgtc
tcggctttgtccagtaaaaagcagctgtatggggcaaaagaggatgaggatgatgatgat
gcacaaagcagtgggaaagaagaggatgttgtttcagaggaagatgacaccaccagtgta
gcttcttccagagctgagatggattcttctgatgtaagtgaggaatcttcagagtatgag
tcaagctcagattcagatgacgaaatagagggggatgacgacgaagaagaagaactaatc
ttcgaggaggatcaatctgaggaactagattttggtcaggaagatgatattgagactgaa
agggaagtagacgtcttcagggaggacgtgtctgaaggtagcagttcagcaaaggcagaa
acagatttagaagatgatgaattgcaaaaaatagagctagatattgcacaaccggcacaa
gagacatcacatctgagaaagaaagacctagatgtaccactggttgagtctaaagaacac
aaaccggataccttagaggcggagaagctctctgcagtacccaagcaagaggatgttttt
aaggaacatgaaaaagcaccatcaccaatgaatgaagaggaagagtatatagagcttcat
ttagaacctgtgcctttgggttcagaaaatgcacctgcagctgtacaagagtctatgacc
atccgtcccttaacaccaactggcgcttttggtgaatctggtcctgttctcaagcttgaa
gaacccaggctgcaacttaatttgactcggattgttgcagaagatgaagaactgtaccct
cgcacacctggccgggacacagctgctcattcagatacagaggtcacgtttcagcctggt
ttgaaagtgcccccatccagccttcctcttttgcaaagccacagtaaggaagatgagtgt
tcgcttccccctgaaaagcatactggtcacttaaaggtgactaagacattgtcagaggaa
gaactgccccgtacaccaggcagagatatcgtggttaagacctcccaccttgggaagtct
cagagtacagagaccattcctgcaacaccaggtagtgatgctccactcacaggtaacagt
cttatgctggcttccccgcacatacctggtagtcccttttcttatctctcccagtcacca
ggaataattaacagtggtattccaaggacacctggaagagattttaacttcaccccaacc
ttcccagaatcaaatacaatattcacctgccacccttctggcaaaacaccctctgtagat
gagccagataaaaagtcatttaaagaaccaaccagtgcttccttaactatgaacagtgtt
ccttcacccatctcatttgctagcccgcctagaggggtaccacacatggacataaggtta
gagacagatgatctggaatcatctgatgctccagcatacttttctaataaattattaagt
gaggagagcgaatgtgagtttactaaagaacagctgccttccactgatgaatctgcacct
tcaccacctctccctcctacagagaagaggaaagaagacagatccaaaaaacctctttct
gctcatgaatttgagtcttgtgttgggaaaaactatgaaacttctgctgttgccttgtca
gaaggtggtttgggtaaacagttgtttataggacaacctgatgctgtcagtggtattaaa
gatccatcagctgtgccactggattttaggaatgatggtctctctgaaaacacagttcat
gaatctattattcaaaaagtccctttaaaagagttggaaaatcagttgaaagaagtttta
aaagaggaggaggatataactaaacataaaaagtcaaggaactccaggcttaaacaatat
gatgagttttcaactgtaccttctcctgaatattccccaccccgtgcaatgtttaaacct
cgctctgaatttgaggagatgaccattctgtatgatatatggaatggaggaatagatgat
gaagatatcaaatacatgtgcataacctatgatagactgttacagcaagataatggcatg
gactggctcaatgacacattatgggtttaccaccctacaaccagtgtttattcccccaag
aagaagaaacgagatgatggtttacgggagcatgtaacaggatgtgcccgtagcgaggga
tattataaaattgatgacaaagacaaacttaaatacctcattaacaaccgttctttggct
gaagagcctcccattgatacccagggaaagagtatcccagctcagcctcaggcctccacc
cgagcaggctcggaaagaaggtcagaacagcgcagactgctctcttcctttactgggagt
tgtgacagcgacttgctcaaatttaatcagctgaagttccgaaagaaaaagttgcgtttc
tgcaggagccatatacacgactggggtctttttgccatggaaccaattgtagctgatgaa
atggtgattgagtatgttggacaaaatattagacaggtaattgcagatatgagggaaaag
cgatatgaggatgaaggaatcggcagcagttatatgtttagggtggaccacgacaccatc
attgatgcgacaaaatgtgggaattttgcacggttcattaaccacagctgtaatcctaat
tgctatgcaaaggttgttactgtggagtctcaaaagaagattgtgatctactctaaacag
tatatcaatgtgaatgaagagataacatatgattacaagttccctatagaggatgtgaag
atcccttgtctttgcggagcagagaactgcagagggacgctaaattag
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integrated database retrieval system
