KEGG   Xenopus laevis (African clawed frog): 108718722
Entry
108718722         CDS       T01010                                 
Symbol
wdr48.L
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
xla  Xenopus laevis (African clawed frog)
Pathway
xla03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:xla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    108718722 (wdr48.L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xla03400]
    108718722 (wdr48.L)
DNA repair and recombination proteins [BR:xla03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     108718722 (wdr48.L)
SSDB
Motif
Pfam: DUF3337 WD40 NBCH_WD40 ANAPC4_WD40 WDR54 WD40_like Nucleoporin_N RAWUL Tfb2_C
Other DBs
NCBI-GeneID: 108718722
NCBI-ProteinID: XP_041421711
Xenbase: XB-GENE-17338986
UniProt: A0A8J1KWN8
LinkDB
Position
6L:complement(11803099..11832588)
AA seq 678 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWNVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCQKLMKLKGHTDNVKSLLLNKDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEGFTHVYSGGRDRKIYCTDLRNPDIRLLICEEKAPVLKM
ELDRSADPPVALWVSTTKSSVNKWPIKGILNFRTSGDYENDCSTPLSPICTQPDQVIKGG
ASIIQCNILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEFWPRTHIN
PMEEEENEVNHVANGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINVDTESQTTSSSNNEKPGEQEKEEDIAVLAEEKIELLCQDQILDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgcatcacaggcagaacacggctgggcggaggaaagttcaggtatcgtatgtg
atcagagatgaagtggagaagtacaatcgcaatggggtgaatgcactgcagctggatcct
gcgctgaacaggctcttcacagcgggccgggattctatcatcaggatatggaatgtcaac
cagcacaagcaagatccttatatcgcgtctatggaacatcacaccgattgggtcaatgac
attgtcctctgctgcaatggcaaaacgttaatctctgcatcttcggatactaccgttaaa
gtatggaatgcacacaaggggttttgtatgtccaccttaaggacacacaaggattatgtg
aaagctttggcttatgcaaaagataaagaactggtggcatctgcaggactggacaggcag
atatttctctgggatgtaaatactctcaccgcactgactgcctccaacaacacagtcact
acttcttctttgagtggaaacaaagattctatctacagtcttgcgatgaaccagatggga
acagtaattgtctctgggtctacagaaaaggtcttaagagtctgggatccaagaacttgc
caaaagctgatgaagctgaaaggacacacagacaatgtaaagtctctgctgttaaacaaa
gatgggacacagtgtctctcaggcagctccgatggaacaatccgactgtggtctctgggt
cagcaaaggtgtatagccacctaccgcgtccatgatgaaggggtttgggctctccaggtt
aatgaaggcttcacacatgtctattcaggagggagggaccggaagatctattgtacagac
ctacggaatcctgacattcgcttgcttatatgtgaagagaaagcgccagttctaaagatg
gaactggataggtcagcagaccctcctgtggcactttgggtgtcaacaactaaatcctct
gtaaataaatggcctatcaaaggtatcctgaacttcagaacttctggagattatgagaat
gactgcagcactccgctcagcccaatttgtacccagcctgatcaggttattaaaggggga
gctagcatcatccagtgcaatattctcaatgataaaaggcacatattaaccaaagacact
aataacaatgtggcttactgggatgttttaaaggcgtgcaaagtggaggatctgggaaaa
gttgattttgaagaagaaataaagaaaaggtttaagatggtttatgtaccgaattggttc
tcagttgatctgaaaactggaatgctgacgataacactagatgagagcgactgctttgct
gcatgggtttctgcgaaggatgctggattcagcagtccggatggatctgacccaaaattg
aaccttggaggtctcctattacaagccctgctggagttttggcccagaacccacattaat
cccatggaagaagaggaaaatgaagtgaatcatgtggcaaatggtgagcaagaaaaccgg
gtacagaaaggcaatgggtatttccaagtgcccccacatacaccagttatctttggtgaa
gctggaggccgcacccttttcaggttattatgtagagactctggtggagaaacggaatcc
atgcttctcaatgagaccgtgccgcagtgggtgatcgatatcactgtagataaaaatatg
ccgaaattcaacaaaatccccttctacctccaacctcattcatcttccggtgcaaaaact
ttgaaaaaagaccgattgtcagcaagcgacatgctccaagtcaggaaagtgatggaacat
gtatacgagaagataataaacgtggatacagagtctcagacaacgagctcgtccaataac
gagaagccgggagaacaagaaaaagaggaagatatcgctgtgttggcagaagagaagatc
gagcttctttgtcaggaccagatattagaccctaacatggaccttcggactgtaaagcac
ttcatatggaagagcggtggtgacctcacactccattaccgtcagaaatccacgtga

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