| Entry |
|
|---|
| Symbol |
pnn.L, drs, drsp, mema, pinin, pnn, pnn-a, pnn-b, sdk2-a, sdk3
|
|---|
| Name |
(RefSeq) pinin, desmosome associated protein L homeolog
|
|---|
| KO |
|
|---|
| Organism |
xla Xenopus laevis (African clawed frog)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:xla00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
394270 (pnn.L)
03015 mRNA surveillance pathway
394270 (pnn.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:xla03019]
394270 (pnn.L)
03041 Spliceosome [BR:xla03041]
394270 (pnn.L)
Messenger RNA biogenesis [BR:xla03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
394270 (pnn.L)
Spliceosome [BR:xla03041]
Complex C
Other components
EJC/TREX
394270 (pnn.L)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
8L:complement(96449115..96461090)
|
|---|
| AA seq |
689 aa
MAVAVRTLQEQLEKAKESLKNVDENIKKLTGRDPNETRPAQARRLSLTGPNAIGGRGRGG
ILLRRGLSDSGGGPPAKQRDFEGALNRLGGERRQRRESRQESDAEDEDDKKPALQSSVVA
TSKERTRRDLIQDQNMDEKGKQRNRRMFGLLMGTLQKFKQESNVATEQLKRRHEIEQKLE
VQAEEEKKLVESERRELFEERRTKQTELRLLEQKVELAHLQEEWNDHNKKIIKYIRTKTK
PHLFYIPGRMCPQSQKFFDESQKKLNAIFESRRLEFAEQLNKMEARPRRQSMKDRDQEKK
PEEQNEEHTEDREDGKMSRHNREVETGNQPNDVDMEDTLEEDKEVTISMIDVEMAQDARG
VEDLEDSKQMEEKIEEEGRVEVEESQNSQWEEREVEMVEDEVKEEETKDEIKQNISEDQQ
TFEISQSEVLDLMENLKDNEEPSEVQAENNFTFEAETEATKEPESEREVESPERLQKEPD
LMFQPPANYESRTQPEHHFNVDEEPFPEKEQMAAVIVTEAQVEYAPKPASVHKTKRSRSK
GRNKNKMGKSRSSSSSSSSSSSSSSTSGSSSSSSSSQSSSSSSSSSSGSSSRDSSSSSSS
SSESRSRSRGRGHARDEKRRRSAEHKRRDGAGVERSHKSSKGSGRDSKGSKDKSSRSDRK
RTTSEGSRSGKRPSRNERDRKSDRKDKRR |
|---|
| NT seq |
2070 nt +upstreamnt +downstreamnt
atggcggtggctgtgcgaaccctgcaagagcaattggaaaaagcaaaggagagcctgaaa
aacgtcgacgaaaacataaagaaattaaccggccgggacccaaatgagactaggcctgca
caagcaaggcgactgtccctcacaggccctaatgcgattggaggtagaggccgtggtggg
attttactaaggcgtggactctctgatagtggaggaggtcccccagccaaacagagagac
tttgaaggtgcactcaacaggctgggtggggagcgtcgccaaagaagagagtcacgccag
gaaagcgatgcagaggatgaagatgataaaaagccagcattgcagtcctcggttgttgct
acctccaaagaacgtacacgccgggatcttatacaagatcagaacatggatgaaaaaggc
aaacaaaggaatcggcgtatgtttggcctgttgatgggtactcttcaaaagtttaagcaa
gagtcaaatgtggcaacagagcagctaaaaaggcgccatgaaatagaacaaaagcttgaa
gtgcaggctgaagaagaaaagaaattggtggagagtgagagacgtgaactctttgaggag
aggcggactaaacagacagagctacgtcttctagaacagaaggtcgagcttgcacacctg
caagaagagtggaacgatcacaacaaaaaaattataaagtatataagaacaaaaacaaag
ccgcatctgttctacatacctggcaggatgtgtccacagagccaaaagttttttgatgaa
tctcagaaaaaacttaatgcaatatttgaaagtaggcggcttgagtttgctgagcagtta
aacaaaatggaagctaggcctaggcgtcagtccatgaaagacagagaccaagagaagaag
ccagaggaacagaatgaagaacatacggaggatcgagaagatggtaagatgtctcggcat
aatagagaggttgagacgggtaaccagccaaatgatgtagatatggaggatactctagag
gaagataaagaggttactattagcatgatagatgtagaaatggcacaggatgctagagga
gttgaagatctagaagattctaagcagatggaggaaaagatagaagaagaaggcagagtt
gaggtagaagaatcccagaatagtcagtgggaagaaagggaagtagaaatggttgaagat
gaagtcaaggaagaggaaacaaaagatgaaataaaacagaatattagtgaagatcagcaa
acatttgagattagccaatcagaggtattagacttgatggagaatttaaaggacaatgag
gaaccaagtgaggttcaggcagaaaataattttacatttgaagctgagacagaagctaca
aaggaacctgaatctgagagggaggttgaatccccagagagactacagaaggagccggat
ttgatgttccaaccaccggccaattatgagtcaaggactcagccagaacaccactttaat
gtggatgaagagcctttccctgaaaaagaacagatggctgcagtgattgtgactgaggca
caagtagaatatgccccaaaaccagcctccgtccataaaactaaaaggagtaggagcaag
ggaagaaataaaaacaaaatgggtaaaagcagaagtagtagtagcagtagttcgagtagt
agttctagctctagtactagtgggagcagttctagtagtagcagtagccaaagcagttca
agcagcagtagcagcagcagtggaagcagcagccgagacagcagcagtagtagcagcagc
agtagtgaaagtcgaagccgcagcagaggtcgtgggcatgccagagatgaaaaacgcagg
aggagtgcggagcacaagaggagagatggagcaggtgtagagagaagtcacaagtcttca
aaaggcagtggcagagactccaagggatccaaggacaaaagttcaaggtctgacaggaag
aggactacttcagaaggtagtcggtcaggcaagcgaccctcaagaaatgaaagagaccgt
aaatcagacaggaaggacaaaagacgttaa |
|---|
