Xenopus laevis (African clawed frog): 398075
Help
Entry
398075 CDS
T01010
Symbol
rxrb.S, rxrb, rxrb-a, rxrb-b, RXRbeta
Name
(RefSeq) retinoid X receptor beta S homeolog
KO
K08525
retinoid X receptor beta
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03320
PPAR signaling pathway
xla04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
398075 (rxrb.S)
03320 PPAR signaling pathway
398075 (rxrb.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
398075 (rxrb.S)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xla03310
]
398075 (rxrb.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
398075 (rxrb.S)
Nuclear receptors [BR:
xla03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
398075 (rxrb.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
398075
NCBI-ProteinID:
NP_001081830
Xenbase:
XB-GENE-865350
UniProt:
Q91613
LinkDB
All DBs
Position
8S:80621950..80639140
Genome browser
AA seq
452 aa
AA seq
DB search
MGDSRVCQSPDTSSLSPPLGHSFSDTPPPPSAPLHPSMVGSAMTSSVNSPLGSIGSPFPV
INCSVGSPGIPGTPSIGYGPVSSPQINSTVNLSGLHHVGSSEDVKPPLGMRSMQSHPNGG
TVSGKRLCAICGDRSSGKHYGVHSCEGCKGFFKRTIRKDLTYTCRDSKDCIVDKRQRNRC
QYCRYQKCLATGMKREAVQEERQRGRERDGEAELSGAINEEMPVEKILEAELAVEQKSDQ
SLEGGGSPSDPVTNICQDADKQLFTLVEWAKRIPHFSELPELPLDDQVILLRAGWNELLI
ASFSHRSISEKDGILLATGLHVHRNSAHSAGVGAIFERVLTELVSKMRDMRMDKTELGCL
RAIILFNPDAKGLSNPGDVEVLREKVYACLESYCKQKYPDQQGRFAKLLLRLPALRSIGL
KCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtcgggtatgccaaagcccggacacatcatctctcagcccccccttagga
cactcctttagtgacacccctccacctccttctgcccctttacatccttccatggttgga
tctgcgatgacctcatctgtcaactccccacttggtagcattggctctccttttcctgtt
atcaattgttctgttggatctcctggcattcctggaactccatcaattggttatggacct
gtcagcagtccccagattaattccactgtcaatctgtctggcctacatcatgttggctcc
tctgaggatgtgaagcctccacttgggatgaggagtatgcagagtcatcccaatggaggg
acagtcagtggaaagaggctgtgtgcaatctgtggggaccgctcttcaggcaagcactat
ggagtgcacagctgtgagggatgtaaaggattcttcaaacgtacaattcgtaaggacctg
acctacacatgtagagacagcaaagattgtattgtagataagaggcagaggaaccgctgt
cagtattgcagatatcagaaatgccttgctactgggatgaagagagaagcggtacaagaa
gagcgtcagcgaggaagggaacgtgatggagaagcagaattaagtggggcaataaatgaa
gagatgcccgtggagaaaatattggaagcagaactggcagtagaacagaaaagtgaccag
agcctcgagggaggcggttcacccagtgatccagtcactaatatatgccaggatgctgac
aaacagctctttactcttgttgaatgggccaagaggatccctcacttctctgagctgcct
gagctgcctttggatgatcaggtcattctgctaagggctggatggaacgagcttcttata
gcttctttttctcatcgctcgatctctgaaaaagatgggattttacttgccactggtctc
catgttcacaggaatagcgctcacagtgctggtgtgggggccatatttgagagggttcta
actgagttggtttcaaagatgagagacatgcgcatggacaagacagaactgggctgcctc
agagcaatcatattgtttaacccagatgccaagggtttatctaacccaggggatgtggaa
gttttgcgggagaaagtatatgcttgtttggaatcctactgtaaacagaaatatccagat
cagcaaggaaggtttgccaagttacttctgcgtctgccagctctgcgatccattggtctg
aaatgtcttgaacatctattcttttttaaacttattggagacactccaatagacacattt
ctgatggagatgttagaggcacctcaccagctatcttga
DBGET
integrated database retrieval system
