KEGG   Xenopus laevis (African clawed frog): 398316
Entry
398316            CDS       T01010                                 
Symbol
nr1h5.S, bar, for1, for2, fxr, hrr-1, hrr1, nr1h4, rip14, xfor
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 S homeolog
  KO
K08538  farnesoid X receptor beta
Organism
xla  Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:xla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xla03000]
    398316 (nr1h5.S)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:xla03310]
    398316 (nr1h5.S)
Transcription factors [BR:xla03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    398316 (nr1h5.S)
Nuclear receptors [BR:xla03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   398316 (nr1h5.S)
SSDB
Motif
Pfam: zf-C4 Hormone_recep SidC_N
Other DBs
NCBI-GeneID: 398316
NCBI-ProteinID: NP_001082243
Xenbase: XB-GENE-6251607
UniProt: Q8JJ27
LinkDB
Position
2S:complement(45184659..45226747)
AA seq 530 aa
MRQREQLEQTMANSYVTVSDAYCLAEPLTYYDVLPDHINYQLPDSEFQTASCCQYTNMAY
SSGLQSPSSQCHYTSYGLEAAYGDGQYLLSTCELSKPSTYMTHSMDDVFPTMKRPRVSHT
SIKVKGHEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYRCKNGGHCEMDMYMR
RKCQECRLKKCKAVGMLAECLLTEVQCKSKRLRKNCKQNNSILSNVKTEDDGSDSRHVSS
TTKLTKLPSQLELTGEEYKLIDHIVTAHQKCGISLDDMKMFLEESADPEEIFYHFSEAAV
LHVRAFVEFTKSLPGFEMLDPLDQIALLKASTVEAMLLRSAQIYNQSVMGSTLQTTEGLA
RYPSHSVDFSQIQEFDKCPLYSLEAHPQEEDSTSSTDLTEEFITPLFNFFRSMGSLNVTE
AEYALLSAVTVYFSDRPLLQSKPHVEKLQEPLLGILHKYSRLYHPEDPQHFARLIGRLTE
LRTLHHNHSEVLVLWKARDTKLTPFAVWVLESTMSLESNCKFNLNLLQPA
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgagacagagggaacaactggagcagaccatggcaaacagctatgtaacagtttctgat
gcatactgtcttgctgagccgttaacctactatgatgttctgccagaccacattaattat
caactgccagattcagagtttcagacagcttcttgctgtcagtatacaaatatggcctat
tcctccgggttgcagtcaccatcatcacagtgccactacacctcatatggcctggaagct
gcttacggggatggacagtatctcctaagcacatgtgaactgagtaaaccatccacatac
atgacacacagtatggatgatgtgttcccaaccatgaaaaggccaagggttagccatacc
agcattaaagtgaaaggccatgaagaactttgcgtggtgtgtggagacaaggcatctggg
tatcactacaatgcacttacatgtgaaggctgcaaaggtttctttcgtcgtagcataaca
aagaatgccgtgtatagatgcaagaatggtggccactgtgagatggacatgtacatgcgg
aggaagtgtcaggaatgccgtctaaagaagtgcaaagctgtaggcatgcttgctgaatgt
ttgctcactgaagttcagtgcaaatcaaagaggcttcggaaaaactgcaagcaaaacaat
tctatattatctaatgtgaaaacagaagatgatggaagtgatagcaggcatgtgtcatct
actacaaaactaaccaaacttccatcccaactggaactcacgggtgaagagtataaactt
attgatcacatagttacagcacatcaaaaatgtggcatttcactagatgatatgaaaatg
ttcctggaagagtctgccgatccagaggaaatattttaccacttttcagaagcagctgtg
cttcatgtacgagcttttgtagaatttaccaaaagtcttccaggttttgagatgttagat
cccttggatcagattgctcttctgaaagcgtctactgttgaagcaatgttgttacggtca
gcacagatttataatcagtcagtcatgggttccacgttacaaactactgaaggacttgca
agatacccaagccattctgtagacttttctcagattcaagagtttgacaaatgccctctg
tactcactggaagcacatccacaagaggaggactcaacctcaagtacagatttaacagaa
gagtttattactccgcttttcaactttttcagaagcatgggatcccttaatgtgactgag
gcagagtatgcattactttcagcagtaacagtttacttttcagatcgcccactcttacaa
agcaagccacatgtagagaagttgcaggaaccacttttaggaattctacacaagtactca
aggctctatcatccggaggatcctcagcattttgcgcgactgattggacgtctgacagag
ctcagaacccttcatcacaaccattcagaagtacttgtattgtggaaagcaagagacaca
aagcttaccccctttgctgtatgggtgctggaatcaacaatgagtttagaatcaaactgt
aaatttaatctcaatttactacagccagcataa

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