Xenopus laevis (African clawed frog): 398711
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Entry
398711 CDS
T01010
Symbol
setdb2.S, clld8, setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
398711 (setdb2.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
398711 (setdb2.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
398711 (setdb2.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
398711 (setdb2.S)
Heterochromatin formation proteins
Other heterochromatin formation proteins
398711 (setdb2.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
MBD
Motif
Other DBs
NCBI-GeneID:
398711
NCBI-ProteinID:
NP_001082765
Xenbase:
XB-GENE-1219036
UniProt:
Q6YI93
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Position
2S:140860961..140887510
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AA seq
699 aa
AA seq
DB search
MEQSANARQSTLRSRTQELNTLSVLSKDVSLEDAKKYWKDRQADGKVDWIFEKVLNKLKI
LWQKIKDGSATNLEYVRAVILVNEAGNLEEDLEEDLQEDTDTIHIDIHKENEVQENTDCS
PERKEDTCLNLNTDCGTDVSGSEPECNSTVSPPAAERVYFGNHSCGPSCLSGINPFLFTK
GNPLQLPISCDFQRCHLKINSPDDLSHILYKAPCGRSLRDYDEVHSYLTETGCHFLAVDN
FSFNNHVRLDSNSSFNQGIVQDCDISNDVESVPVAFSNEIDNTRPSNFIYRKTSWPPGYS
LNNFTDIFVKCCNCTDGCLDILTCSCLQLTAQAFTKCMESSLGIGPLGYKHKRLQEPIPT
GLYECNVSCKCDRMLCQNRVVQHGLKLRLQVFKTNTKGWGVRCLDDVDKGTFVCIYAGRI
LIRTADCTVKSTPDDSVACGNEDHEDSTSTCALILSKRKRKTSHSDSEVTVMHTNPYSMR
SHGLSVHRLSNTFSPRQARSGEREFSLQPLRRPKTKTSMLQKRRRQLIEEGACTVQNSSE
EEGPTPPQSPEQKSSAGTKIQRNENSDETASGYVSEESSSSVISGGHPLEKPISKFKSKL
NKTTVYLSTSPEQTCEENLHFLDASKEGNVGRFLNHSCCPNLFVQQVFVDTHQKCFPWVA
FFTNSVVKAGTELTWDYSYDIGTAADQEIQCLCGQKHAK
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagtgccaatgctcggcagtcaaccctacgttcccgaacacaagaattaaat
acactatctgttttgtccaaagatgtatcgctcgaagatgcaaagaaatattggaaagat
cgtcaagcggatgggaaagtagactggatatttgagaaagtattgaacaagctcaagatt
ctttggcagaaaatcaaagatgggtcagcaacaaacttagaatatgtaagagctgtgatt
ttggtgaatgaagcaggaaatttagaagaggacttggaagaggacttacaagaggacact
gataccatacacattgatattcacaaggaaaatgaagtgcaggaaaacacagattgttct
ccagaaagaaaggaggacacatgtcttaacctaaatactgattgtgggacagatgtttca
ggttctgagcctgagtgcaacagcacagtttcgcctcctgctgcagagagggtctatttt
ggaaaccattcatgtggcccatcttgtctctctggcattaatccatttctatttacaaaa
ggaaaccctctacaactcccaatctcctgtgactttcagaggtgccatctaaagataaat
agccctgatgacctgtcacatatcctatataaagctccatgtggcagaagcctgagagac
tatgatgaagtgcattcttacctcactgaaactgggtgccactttttagctgtggacaac
ttttctttcaataatcatgttcggttggacagcaattcatctttcaaccaaggaattgtt
caggactgtgatataagcaacgatgtggagtcagtgccagttgcattctccaatgaaatc
gataacacaagaccatctaatttcatctacagaaagacctcttggccaccaggatactcc
ttaaataatttcacagacatctttgtaaaatgctgcaattgcactgatggctgcttagac
atcttaacttgttcatgcctgcaactcacagcacaagcattcacgaaatgtatggaatcg
tccctcggtatcggtcccctaggctataaacacaaaagacttcaagaacctatccctact
ggattatatgaatgtaacgtgtcctgcaagtgtgatcggatgctgtgccagaatcgagtt
gtgcagcacggccttaaactgagactgcaggtcttcaaaacaaatactaagggctggggt
gtccgctgtctggatgatgtagacaaagggacatttgtttgcatctatgcaggaagaata
ctaatcaggacagcagattgtactgtgaaaagcacaccagatgattctgtggcatgtggt
aatgaagatcatgaagatagcacaagtacttgtgctctaatattaagcaaacggaagaga
aagacgtcccattcagactctgaagtcacagttatgcatacaaacccctacagcatgcgc
agccatggattatctgtccatagactatcaaacacattcagtccaagacaggctagatct
ggtgaaagagaattctctttgcagccacttagaagacccaaaacaaagacctccatgctc
caaaagcgtagaaggcagctcattgaagagggagcgtgcacagttcagaacagttcggaa
gaggagggtccaacacctccacaatcgcctgagcagaaatccagtgcaggaaccaaaata
caaagaaatgaaaattctgatgagactgcttcagggtatgtgtcagaggagagcagtagt
tcagttatttctgggggacatcctttagaaaaacccatatccaagtttaagtcaaagcta
aacaaaacgaccgtgtatctatctacctctccggaacagacttgtgaagaaaacttgcat
ttcttagatgcatcgaaagaagggaatgttggacggtttctaaatcacagctgctgtccc
aatctatttgtgcagcaagtatttgtggatacacaccagaaatgttttccgtgggtggca
ttttttactaacagtgtagtaaaagctggaacagaactaacctgggactatagctatgat
attgggactgctgctgatcaggaaatccaatgcctgtgtggtcaaaaacatgcaaaataa
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