Xenopus laevis (African clawed frog): 432147
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Entry
432147 CDS
T01010
Symbol
setdb1.L, setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla00310
Lysine degradation
xla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
432147 (setdb1.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
432147 (setdb1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
432147 (setdb1.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
432147 (setdb1.L)
Heterochromatin formation proteins
Other heterochromatin formation proteins
432147 (setdb1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
DUF4573
BAHCC1-like_Tudor
DUF4537
Oberon_cc
Motif
Other DBs
NCBI-GeneID:
432147
NCBI-ProteinID:
NP_001085076
Xenbase:
XB-GENE-866480
UniProt:
Q6INA9
LinkDB
All DBs
Position
8L:117674325..117717910
Genome browser
AA seq
1275 aa
AA seq
DB search
MESQETMELEQMVVKELGISMDDLRELIDRELEKIEFVKQRKAQLLEMEQLVKQKEAEVD
HVDKLFDNATRAVDDCETLVKSLYDQIGMTYKESSSEDEGSSKPTEVIEIPDEDDDDVMS
VGSGEAVSKIPKEKHLLREAMAAMKRSRQDVQSIVEAIQKKSDGPQTRFSSHPSSPTSSV
GGSNQASASNDMSKDGDLVVGMRILGKKRTKTWHKGTLISIQCVGTGKKFKVKFDNKGKS
LLSGNHIAYDYHPPPENLTVGSRVVAKYKDGNQVWLYAGIVAEPPSSKNKMRYLIFFDDG
YASYVTHAELYPVCRPWSKSWEDIEDVSCRDFIQEYVNAYPNRPMVLLKSGQLIKTEWEG
TWWKSKVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSNASTQEKQQAGQQRTR
PNVGAIRSKGPVVQFTHDLTGNEPEHNPAAPPSPQSMPSPQLIDTDSDSQQAQSKKQVAK
KSTSFRPGSAGSGQSSPIPTESVPQPPAAPRPFQSNQSVQPVQSIQPIQPIHNIQTIQTI
QGIQTIQAIQPIQSIQTLQPIQTIQPLQTIQTLQGNRIVTSIQQFQIIRTENIPAESTYK
APKEKLFYLPHVCNYTCLSRIRPLSHRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYK
SPCGLSLRTMPEIERYLFETQCKMLFLEMFCLDPYVLVDRKFQPQKPFYYIPDITYGKED
VMLSCVNEIDRTPPPQVAYSKERIPGKGVFINTGADYLVGCDCTDGCRDKSKCACHQLTI
QATACTPGAQSNPMAGYQHKRLEECLPTGVYECNKRCKCSANMCNNRLVQHGLQVRLQLF
KTQNKGWGIRGLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKE
GYESDAKSSSDSSGVDLKEDHEENSGSEDQEESNDSSDDNFGKNEDITTSSVWRSYATRR
TTRGQKENGTSETASKDSRTRDETTDCKLPEETSKNKVASWLSSNTMADSVMDSDSRSSL
KMGEALETDKPKESEEASKYPRFAEGNRAYGYNPTPTKKDGVRRPVTKTALHQIKRQSSS
AQPTEEVLTLSSSSDSEVGSGTNGSKKPAAQATANDSDDIQTISSGSDEEEEKKNVAASA
GPVKRQVAVKSTRGFALKSTHGITVKSNMASGEGGPGRRNTRQFFDGEESCYIIDAKLEG
NLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKK
LLCCCGSTECRGRLL
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcaggagaccatggagttggagcagatggtggtgaaggagctgggcatttca
atggatgacttgcgtgagctgatagatagagagctggaaaaaatcgagtttgtgaaacag
cggaaagctcagctattggaaatggagcaactggtgaaacaaaaagaggcagaagtggat
cacgtggacaagcttttcgacaatgctacaagggcggtggatgattgtgagacgttggta
aagagtctgtatgaccaaataggaatgacctacaaagagagcagctctgaagatgaagga
tcttcaaaaccaacggaggttattgaaatccctgatgaagatgatgatgacgttatgagt
gtgggatcaggtgaagcagtgagtaagattccaaaagagaagcatttgttacgagaagca
atggctgctatgaaaagatcaagacaagatgtgcagagcattgtagaagccatccaaaag
aagtcagatggacctcagactagattttcttctcatccctcctcaccaaccagctctgtg
ggtggctccaatcaggccagtgcctcaaatgacatgagcaaagatggagaccttgttgtg
gggatgcgtattctgggcaagaagagaaccaagacttggcacaaaggaactctgatctct
atacagtgtgtgggtactgggaaaaagttcaaggtcaagtttgacaacaaagggaaaagc
ctgttgtctggtaaccacattgcctatgactaccacccgcctcctgaaaatctgactgtt
ggtagcagagttgtagccaagtataaagatggaaaccaggtgtggctctatgctggaatt
gtagccgagcctccaagcagcaagaataaaatgagatatctgatctttttcgatgatggc
tatgcatcctatgttacccatgcagaactgtatcctgtctgcaggccttggagcaaatca
tgggaggacattgaggatgtgtcctgtcgggattttattcaggaatacgtcaacgcttac
cccaatagaccaatggttcttctgaagagcggccagctgattaaaacagagtgggaagga
acatggtggaaatccaaggtggaagaagtagacgggagtctggtgaaaatcctttttctg
gatgacaaacgttgtgaatggatctatcgaggttctacacgcctggagcccatgttcagc
atgaagacatctaatgcctcaacacaggagaagcagcaagctgggcaacagaggacacgt
cctaatgtgggtgccataaggagcaaggggcctgtagtacaattcacacatgacctgact
ggcaatgagcctgaacacaatcctgctgcacccccatctcctcagtcaatgccatcgccc
cagctcattgacacagactcggacagtcagcaggcccagtccaagaagcaagtggctaag
aaaagcacttcattccgtccaggatcagcgggatccggccagtcttccccaatccccacc
gagtcagtacctcaacctcctgctgctccgcgtcctttccagtccaaccaatctgtgcaa
cctgtccagtctattcagcccattcagcccattcacaatatacagaccatccaaactatt
caaggcattcaaaccatccaagcaatccagccaattcaatccatacaaactctccagcct
atccaaaccattcaacctctccagacaatccagactctccaaggaaacaggattgtgact
tctattcaacaattccaaataatacggacagaaaatattcctgcagagagcacctacaag
gcccccaaagaaaagcttttctacctccctcacgtctgcaactacacttgcctgtcccgt
attcgcccgctctctcaccgaggcaagaaccccctcctagttccgctactttacgacttc
cgtcgtatgaccgcccgccgccgggtgaaccgcaaaatgggtttccacgtcatctacaag
agcccctgtggcctgagcctgcgcacaatgccagagattgaacgttatctttttgagacc
cagtgcaaaatgctcttcctggaaatgttttgtctggacccttacgtcttggtcgatcgt
aaatttcagcctcagaaacccttttactacatcccagatatcacgtatggaaaggaagac
gttatgctgtcctgtgtcaatgaaatagacaggacccctcctcctcaagttgcctacagc
aaggagcgcatcccggggaaaggagtcttcattaatactggtgccgattaccttgtggga
tgcgactgcacagatgggtgtagagacaaatccaaatgtgcatgtcaccagttgaccatt
caagccacggcctgcactccaggggcccagagtaacccgatggccggataccagcacaag
cgcttggaagaatgtcttcccactggggtgtacgagtgcaacaagagatgcaaatgcagt
gctaatatgtgcaacaaccgccttgtacaacatgggcttcaggtgcgactccaactcttc
aaaacccagaacaagggctgggggatccggggtttggatgatatagcgaaaggctccttt
gtctgcatctatgcaggtaagatcctcactgatgactttgcggacaaagaaggcctggag
atgggcgacgagtactttgctaacctggaccacatagaaagcgttgagaactttaaggag
ggctatgagagcgacgccaagtcttcctccgatagcagcggcgtagacctcaaagaggac
catgaggaaaacagtggcagtgaagatcaggaagagtccaatgacagctcagatgacaat
tttggcaagaacgaggacatcacgaccagctcagtgtggcgcagttatgccacccgcaga
accacaagaggccagaaggagaacggaacgtccgagactgcttccaaggattcaaggact
cgggatgagaccaccgactgcaaactgccagaggagacctccaagaacaaagtggcctcc
tggttgagttcaaacaccatggcggactctgttatggactctgacagcaggtcctcccta
aagatgggagaggcattagagaccgataaacctaaggaatcagaagaggcaagcaaatac
ccaagattcgcagaaggaaaccgagcgtacggttacaaccccaccccgaccaaaaaagat
ggtgtgcggcgacctgtcaccaaaaccgcattacaccagatcaagcggcagtcaagctca
gcacaacctactgaagaagtcctgactttatccagcagctcagacagtgaggtgggaagt
gggaccaacggtagcaaaaaacctgcagctcaggccacagccaacgatagtgacgacatt
cagacaatttcatctggatccgatgaggaagaggagaagaagaatgtagctgcttctgct
ggtcctgtaaaaagacaagtggccgtaaaatccacccgaggatttgccttaaaatccaca
cacggcatcactgtgaaaagcaacatggcgtcgggtgagggcggtcccgggcgcaggaac
acgcggcagttctttgatggggaggagtcctgttacattattgatgcaaaacttgaaggc
aacttgggtcgatacttgaatcatagctgcagccccaacctctttgtacagaacgtgttt
gtggatacacatgatcttcgcttcccgtgggtggccttctttgccagcaagaggattcgg
gctggtactgagctcacgtgggattataattatgaggtgggcagtgtagaaggaaagaaa
ctcctgtgctgctgcggatccacagaatgtcggggtcgtctcctataa
DBGET
integrated database retrieval system
