Xenopus laevis (African clawed frog): 446573
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Entry
446573 CDS
T01010
Symbol
herc4.S
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X2
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
446573 (herc4.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
446573 (herc4.S)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
446573 (herc4.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
HECT type E3
446573 (herc4.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
446573
NCBI-ProteinID:
XP_018082440
Xenbase:
XB-GENE-962985
UniProt:
A0A1L8FES4
A0A974HA89
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Position
7S:complement(23103266..23151015)
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AA seq
1049 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC
NDLGQLGHDKSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSI
AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESA
PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLR
SQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQIA
CGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLTHEDYVRRLPEANG
CYCVKRIYSGGDQSFAHYFTIQNCLPPDDFRKCNCSRKIWTLDEALIRRWLNYSSGRLPP
EIVNEIDKVFSSAASLNGSFLSTSNNDHYRTSSKFSGVDMNVARLLLNKLMDPSQPQIAQ
QVAASLEKNLIPRLTSSPPDIECLRLYLTLPECPLMTETNNFRSLAIPFAKAIVSLDKAP
LKVLENWWSLLEPTLYMRIVQLYKDVVVHLLKLPNNRIPPAEQWIFYTFLNTAFGVLEIL
HRVNEKAAQIISYDKFYIHEVQDFVDIRKDYFNWFQQQASGMIADPPVTICTYPFVFDAQ
AKTTLLQTDAVMQMQEAVDNANRQNISSWFHPIVESVDTCLILIVRRDNIVGDAMEVLRK
TKNIDYKKPMRVIFVGEEAVDAGGVRKEFFLLVMRELLDPKYGMFRYYKKSRLIWFSDQT
FEDIDLFHLIGVVCGLAIYNFTIIELKFPLALYKKLLQKKPSLEDLKELKPVVGRSMQRL
LDYTEDDIEETFCLYFTITVDHFGTIEDRELIPNGAETPVNKKNRQEYVDAYVDYIFNES
VAALFSAFSAGFHKVCGGKVLELFQPNELQAMVIGNTVYDWKELEKSTEYKGEYWAEHPT
IKMFWEVFHKLPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGDQFLPVAHTCFNL
LDLPKYSHKETLRSKLIQAIDHYEGFSLV
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggaaatgcatcttttggacagctgggattaggggggattgatgaagag
gttgttatagaacccagaagatgtgactttttcatcaataaaaatgtccgtgatgtcgga
tgtggaaacagacacacgggttttgtcttggatgatgggacagtttacacctgtggatgt
aacgatcttgggcaactgggacatgacaaaagtagaaaaaagccagagcaggttggagcc
ctggatgctcagatcatcgtggcagtttcatgtggagaagctcacacattggcattaaat
gacaaaggtcaagtgttttcttggggtcatgctgcacatggacagataggtgtgtctatt
gcagaagattatattagagtaccaagaaatataaagagtttgtctgatatacagattgta
caagttgcctgtggacatcatcattcactcgcactatctaaagaaagcaatatttactca
tggggacaaaatcagtatggtcagcttggcttgggctcggaaaaaaggaaagagagtgca
cccagacatattaaatctctatcaggcattccctttgctcacattgctgctggaggtggc
cacagttttgcattaacaatctcaggggccatttttggttggggaagaaacaaatttggc
cagcttggtcttaatgatgaaactgatcgaagtgacccagctcttctcaagtcacttcgc
tcgcagaaaataatttacatctgctgtggagaagatcatacagctgctttaaccaaagag
ggtggtgtatttacattcggagctgggggctacggacagcttggtcacaactctgccagc
catgaagtcaacccaaggaaggtgtttgagcttatgggaaacattgtgacacaaattgca
tgtgggaggcagcacacattagcttttgttccttcatctggacgcatatactcgtttggg
cttggtggcaatgggcaactaggaatagggtctaccagtaacaaaaaaagtccttccatg
gttaaagggaactggcttactcatgaagactatgtccggcgccttcctgaggctaatgga
tgttactgtgtgaagagaatttatagcggtggagaccagagttttgcacattattttact
atacagaattgccttccaccagacgactttaggaagtgcaattgctctagaaaaatatgg
actttagatgaggcacttataagacgatggctgaattactcctcaggaagacttccacca
gaaatagtaaatgaaatagacaaagtattttcatcagctgcaagcttaaatggaagtttt
ctatcaacaagcaacaacgatcactacaggacaagttccaagttctcgggggtagacatg
aatgttgctagactcctgcttaacaagttgatggacccatcacagccacaaatagcccaa
caggtggctgccagcttagagaagaatctcattcccagactcacaagttctccaccagac
attgagtgcttgcgcttgtatctcaccctcccagagtgtccccttatgactgaaaccaac
aacttccgttctttagccattccgtttgctaaagctattgtaagcttagataaagcacca
ttaaaagttttagaaaactggtggtccctgcttgagcccacattatacatgagaatagta
caactttataaggatgttgtggtgcacctattgaaactccccaataatagaattcctcct
gcagagcaatggatattctacacctttcttaatactgccttcggggttttggagatcctg
cacagggtaaatgaaaaagctgcacagatcatatcttatgataaattttacattcatgaa
gtgcaagattttgtagatatccgaaaagactacttcaactggtttcagcaacaagcgtct
ggaatgattgctgatccaccggttacaatttgcacatatccctttgtttttgatgctcag
gcaaagacaacacttctgcagacagatgcagtcatgcagatgcaggaggcagttgacaat
gctaacaggcagaacatctcgtcctggtttcatcctatagttgaatcagtggatacatgt
ctgatattaattgttcgcagagacaacatcgttggtgatgctatggaagttctaaggaaa
acgaaaaacatagactacaaaaagccaatgagggtaatctttgttggagaagaagcagtt
gatgcagggggcgttcgtaaggagtttttcttactagtcatgagagaattactggacccc
aagtatggaatgttcagatattataaaaaatcaagattaatctggttttctgatcagacc
tttgaagacatcgatttattccaccttattggtgtagtctgtggtttagcaatttacaat
ttcacaattattgagctcaaattccctttggcactatataagaagcttctgcaaaagaaa
ccatccttggaagacttaaaggagctgaagcctgttgttggacggagcatgcagcggttg
ttggactatactgaagatgacattgaggagacattctgcctctattttacaattacagta
gaccactttggaaccatagaagacagagagctaataccaaatggagctgagacaccagtg
aataaaaaaaacaggcaggaatatgtggatgcctatgtagactacatctttaacgagtca
gtggccgccttattcagcgcgtttagcgcagggtttcacaaagtgtgtggcgggaaggta
cttgagctcttccaacccaatgaactgcaggccatggtgattggtaatactgtctatgac
tggaaggaactagaaaaaagcacagaatacaaaggagaatattgggccgaacaccctaca
attaagatgttctgggaagtttttcataaattacccttggaaaagaaaaagcaattcttg
ctgtttcttactggcagcgaccggattcctattctcggtatgaaaagtttaaagcttgtg
atccagccaacaggaggaggagaccagttcctaccagtagctcacacgtgtttcaacctc
ttggatctccccaaatacagccataaagaaactctgcgatccaaactgattcaagctata
gatcactatgaaggctttagccttgtctga
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