Xiphophorus maculatus (southern platyfish): 102218478
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Entry
102218478 CDS
T02923
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102218478 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xma03019
]
102218478 (dis3l)
Messenger RNA biogenesis [BR:
xma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102218478 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
Rrp44_S1
Motif
Other DBs
NCBI-GeneID:
102218478
NCBI-ProteinID:
XP_023188366
Ensembl:
ENSXMAG00000013661
LinkDB
All DBs
Position
4:1172224..1184551
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AA seq
1049 aa
AA seq
DB search
MIKTEKVLHLKSSRGRKVRVVREHYLRERVPCFSALCQAGCENDGKVLPGDLTHYVVPDA
EVVLNYLEVLELVELQGVVFTQTACQALHSKGRRFYNRLRNLLKDPRHDCVLFANEFQEF
SYCPREKGESQEKWQTRCVYAAAVWYYNHLAGMMNLVMITEDSDAVSRFSSLNSGVYVIS
VQEYLQSFWPALQAAQDLYGSVRQALQEKEADSSQREFPEHLPAQVLEAGIKSGRFVQGT
LNVSKHRAQNEAFVTSDGLSSKSPDLSAGVLVAGSKSRNRAVHGDLVAVELLPRVEWRGK
VTALSEGLADERSGDDDEIKPMPTGRVVGILQRNWRDYVVTFPPRDAAQTQSRAAQRVLA
VPWDRRIPKVRISTQQADALQDHRVVVRIDSWPSTSLYPNGHSVRVLGRAGELETEIQTI
LVENCIHVPPFSEAQLREMPVNSPEKPWAADPAEAAARRDLRRTHLVFSIDPRGCEDVDD
TLSVRRLAGGKLLELGVHIADVTHFVREESLTDLEARSRATTYYLADRRYDMLPAVLSAD
LCSLLGGVDRYAMSVVWELDAQSLAVTKVWFGRTLIRSSYQLHYELAQALLNGEEVQVPE
LARLDPEERDAKLSELIQALETLTHIARHLRAQRDRGGALELEGVEVRAQLDQDKNIMAL
VPRQPLEVHETVAECMIYANHWVARKIQEAFPYQALLRRHPQPRQELFSQLVDTARARGF
SIDTRTNKALADSLDRAVDPEDPLVNRLFRMMATQAMSQAVYFSTGAQPEDQFYHYGLAL
DRYTHFTSPIRRYADMVVHRLLTAALQLERGGQQGAEPGKPPAGNKDMEELAEHINSRNR
AAQRAQNLSTGLFQCLFFKERDPETDPRCVADAIIYSIRDNGVLVFIPEYGVKGPVYMRN
KEGLVVTAGPDGTCEWQSGSVHRHSDHITTTSGCGSATFRLFDHITVRISVLSTNCHADT
LTLQVISNQPHLGAAPQRPGSPRRSQLVQEVVRLAGEAQEKAARRPELSKEEREFRQSRT
PNLYSLLEEIRELALMDPDAAARPGTVTA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccgagaaggttctgcacctgaagagcagccgaggccggaaggttcgggtg
gttcgggagcactacctgcgggagcgggtcccctgcttcagcgcgctgtgccaggcgggc
tgcgagaacgatggtaaagttctgcccggagacctaacccactatgtggttccggacgcc
gaggtggtactgaactacctggaggttctggagctggtggagctgcagggggtcgtgttc
acgcagacggcctgtcaggctctgcacagcaagggccgcaggttctacaaccgtctgagg
aacctgctgaaagacccgcggcatgactgcgtcctgtttgctaacgagttccaggagttc
tcctactgccccagagagaaaggagagagccaggagaaatggcagaccaggtgtgtgtac
gccgccgctgtgtggtactacaaccacctggctgggatgatgaacctggtgatgatcact
gaggactcggacgccgtgtcccggttcagcagcctcaactccggagtctacgtcatcagc
gtccaggagtacctgcagagcttctggccggcgctgcaggccgcccaggatctgtacgga
tccgtccgccaggcgctgcaggagaaggaggccgacagctcgcagagggagtttccagaa
catttacctgctcaggttctggaggccgggatcaagtccggacgcttcgtccagggaacc
ctgaacgtgagcaaacaccgcgctcagaacgaagccttcgtcaccagcgacggtttgtcc
tctaagagcccagacctgagcgccggcgtgctggtggccggttctaagagccggaaccgg
gccgtgcacggcgacctggtggcggtggagctgctgcccagggtcgagtggcgagggaag
gtcacggctctgagcgaagggctggcggacgagcggagcggggacgacgacgagatcaag
cccatgccgacaggtcgcgtcgtggggatcctgcagaggaactggagggactacgtggtg
acctttcccccccgggacgcggcgcagacccagagccgggccgcccagcgcgtcctggcc
gttccctgggaccgccggatccccaaggtccggatcagcacccagcaggccgacgcgctg
caggaccacagggtggtggttcggatcgactcgtggcccagcacatcgctctatcccaac
ggacacagcgtgcgggttctgggccgggccggggagctggagacggagatccagacgatc
ctggtggagaactgcatccacgtgccgccgttctccgaagcccagctcagggagatgcca
gtgaattccccggagaaaccgtgggcggcggatccggccgaggcggcggcgcgccgggac
ctgaggcggacccacctggtgttcagcatcgacccgcggggctgcgaggacgtggacgac
acgctgtcggtgcggcgcctggccggcgggaagctcctggagctgggagtccacatcgcc
gacgtcacgcatttcgtcagggaggaatcgctcaccgacctggaggcccggtccagagcc
accacctactacctggcggaccgccgctacgacatgctgcctgctgtcctcagcgctgac
ctttgctccctgctgggcggggtcgacaggtacgccatgagcgtcgtgtgggagctggac
gctcagagcctggccgtcaccaaggtgtggttcggccggaccctgatccgctcctcctac
cagctgcactacgagctggcccaggcactgctgaacggggaggaggtccaggttcctgag
ctggcccggctcgacccagaggagcgggacgccaagctgagcgagctcatccaggcgctg
gagacgctgacgcacatcgccagacacctgcgggctcagagggaccgaggaggagcgctg
gagctggagggagtggaggtccgagcccagctggaccaggacaagaacatcatggcgctg
gttcctcgccagcccctggaggtccacgagaccgtggcagagtgcatgatctacgccaac
cactgggtggcgcgcaagatccaggaggccttcccctaccaggccctgctgaggcgtcac
ccgcagccacgccaggagctgttcagccagctggtggacacggcccgggccagggggttc
tccatcgacaccaggaccaacaaggccttggcggactctctggaccgagccgtggacccc
gaggacccgctggtgaacaggctcttcagaatgatggccacccaggccatgtctcaggcc
gtgtacttctccactggtgctcagcctgaggaccagttctaccactacggtctggctctg
gaccgctacactcacttcacctccccgatccgccgctacgccgacatggtggtgcaccgc
ctgctgaccgccgcgctgcaactggagcgcggtggtcagcagggggctgagcctggcaaa
ccgccggccggcaacaaagacatggaggagctggcagagcacatcaacagcaggaaccgg
gcggcccagcgagcccagaacctttccaccggactcttccagtgcctcttcttcaaggag
cgcgacccggagacggacccgcgctgcgtggccgacgccatcatctactccatcagggac
aacggcgtgctggtcttcattccagagtacggagtgaaaggtccggtctacatgaggaac
aaggagggcctggtggtgacggccggcccggacggtacctgtgagtggcagagcggctcc
gttcaccgccactcggaccacatcaccaccacgtctggctgtggcagcgccaccttcagg
ttgtttgaccacatcacggtccggatctccgtcctctccactaactgccacgccgacacg
ctgaccctgcaggtcatcagcaaccagccgcacctcggcgccgcgccgcagcggcccggt
tcgccgcgccgcagccagctggtgcaggaggtggtgcggctggccggggaggcgcaggag
aaggcagcgcgccgacccgaactctccaaggaggagcgggagttccggcagagcagaacc
cccaacctgtactccctgctggaggagatccgggagctggcgctgatggacccagacgcc
gccgcacggcccggcaccgtgacggcgtag
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integrated database retrieval system
